Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 6.5e-103 377.5 203 100.0
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 2.3e-55 219.5 210 64.3
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 2.1e-29 133.3 200 45.0
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.4e-28 129.8 194 45.9
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 4.5e-27 125.6 196 45.4
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 2.2e-21 106.7 196 41.3
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 1.1e-20 104.4 187 44.4
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 3.1e-20 102.8 196 41.3
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 3.1e-20 102.8 185 41.1
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 4.1e-20 102.4 206 36.9
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 6.9e-20 101.7 196 41.3
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.2e-19 100.9 189 41.3
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 1.0e-18 97.8 195 41.5
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 2.2e-18 96.7 183 42.1
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 2.9e-18 96.3 194 37.6
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 8.8e-15 84.7 195 36.4
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 1.1e-14 84.3 152 42.8
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 4.3e-14 82.4 189 35.4
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 7.4e-14 81.6 181 40.3
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.3e-13 80.9 180 36.1
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 3.7e-13 79.3 195 34.9
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 8.2e-13 78.2 190 42.1
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 2.4e-12 76.6 206 40.3
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 6.9e-12 75.1 199 34.2
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.4e-11 72.8 196 39.8
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 1.0e-10 71.2 206 34.0
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 1.3e-10 70.9 171 35.7
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 3.8e-10 69.3 192 35.4
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 3.8e-10 69.3 175 39.4
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 5.0e-10 68.9 209 32.5
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 1.4e-09 67.4 192 33.3
CiPaw.15G082300 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.2e-09 66.2 198 35.4
CiPaw.15G082200 Carya illinoinensis HOM05D007935 ORTHO05D007393 5.5e-09 65.5 199 35.2
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 5.5e-09 65.5 190 34.2
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 5.5e-09 65.5 183 33.3
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 7.2e-09 65.1 189 33.3
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 1.6e-08 63.9 198 32.3
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 2.1e-08 63.5 184 40.8
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.7e-08 63.2 183 33.3
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 2.7e-08 63.2 186 32.3
ClCG09G010460 Citrullus lanatus HOM05D029613 ORTHO05D007393 3.6e-08 62.8 183 33.9
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 3.6e-08 62.8 183 31.1
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 4.7e-08 62.4 188 32.4
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 4.7e-08 62.4 198 31.3
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 7.9e-08 61.6 178 33.7
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 1.0e-07 61.2 181 35.9
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 1.0e-07 61.2 182 33.0
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 1.4e-07 60.8 180 35.0
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 2.3e-07 60.1 181 32.0
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 3.0e-07 59.7 200 31.0
Sc23g0001170 Simmondsia chinensis HOM05D007935 ORTHO05D007393 5.1e-07 58.9 138 35.5
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.5e-06 57.4 178 32.6
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 2.0e-06 57.0 191 28.8
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 2.0e-06 57.0 186 33.3
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 2.6e-06 56.6 181 32.6
Sed0011111 Sechium edule HOM05D029613 ORTHO05D007393 3.3e-06 56.2 182 29.1
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 7.4e-06 55.1 202 32.2


User provided reference genes

Program Settings