Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G098100 Manihot esculenta HOM05D007473 ORTHO05D009459 7.0e-50 200.3 99 100.0
Manes.02G188900 Manihot esculenta HOM05D007473 ORTHO05D009459 3.7e-43 177.9 97 88.7
Potri.013G116100 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.7e-38 161.0 100 83.0
Cpa.g.sc66.113 Carica papaya HOM05D007473 ORTHO05D009459 2.8e-35 151.8 102 78.4
Sabra19G0097100 Salix brachista HOM05D007473 ORTHO05D009459 3.7e-35 151.4 101 78.2
Thecc.08G199100 Theobroma cacao HOM05D007473 ORTHO05D009459 1.1e-34 149.8 98 80.6
Atru.chr13.1869 Acer truncatum HOM05D007473 ORTHO05D009459 1.8e-34 149.1 101 79.2
Potri.019G086700 Populus trichocarpa HOM05D007473 ORTHO05D009459 4.1e-34 147.9 101 76.2
Duzib116G0725 Durio zibethinus HOM05D007473 ORTHO05D009459 7.0e-34 147.1 98 77.6
Gohir.A09G117600 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.2e-34 146.7 98 77.6
Gohir.D09G114400 Gossypium hirsutum HOM05D007473 ORTHO05D009459 9.2e-34 146.7 98 77.6
Gorai.006G132300 Gossypium raimondii HOM05D007473 ORTHO05D009459 9.2e-34 146.7 98 77.6
Ciclev10003143m.g Citrus clementina HOM05D007473 ORTHO05D009459 1.2e-33 146.4 98 77.6
Nitab4.5_0000051g0010 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.2e-33 146.4 98 74.5
Nitab4.5_0004159g0050 Nicotiana tabacum HOM05D007473 ORTHO05D009459 1.2e-33 146.4 98 74.5
TWI59G1410 Tripterygium wilfordii HOM05D007473 ORTHO05D009459 3.5e-33 144.8 100 78.0
PGSC0003DMG400030214 Solanum tuberosum HOM05D007473 ORTHO05D009459 4.5e-33 144.4 98 74.5
Duzib211G0408 Durio zibethinus HOM05D007473 ORTHO05D009459 7.8e-33 143.7 99 78.8
AUR62004677 Chenopodium quinoa HOM05D000623 ORTHO05D007511 1.0e-32 143.3 99 72.7
AUR62023594 Chenopodium quinoa HOM05D007473 ORTHO05D009459 1.3e-32 142.9 101 71.3
COL.COLO4_36790 Corchorus olitorius HOM05D007473 ORTHO05D009459 1.3e-32 142.9 98 76.5
Ah.05g172820 Amaranthus hybridus HOM05D007473 ORTHO05D009459 2.9e-32 141.7 100 71.0
Oeu054499.1 Olea europaea HOM05D007473 ORTHO05D009459 3.8e-32 141.4 98 73.5
Solyc11g013850.2 Solanum lycopersicum HOM05D007473 ORTHO05D009459 5.0e-32 141.0 98 72.4
Sopen11g008770 Solanum pennellii HOM05D007473 ORTHO05D009459 5.0e-32 141.0 98 72.4
Sc23g0001050 Simmondsia chinensis HOM05D007473 ORTHO05D009459 1.1e-31 139.8 102 73.5
Eucgr.F04148 Eucalyptus grandis HOM05D007473 ORTHO05D009459 2.5e-31 138.7 94 79.8
QL09p016421 Quercus lobata HOM05D007473 ORTHO05D009459 2.8e-30 135.2 99 74.7
GSVIVG01036821001 Vitis vinifera HOM05D007473 ORTHO05D009459 2.8e-30 135.2 100 73.0
Hma1.2p1_0510F.1_g168850 Hydrangea macrophylla HOM05D007473 ORTHO05D009459 6.1e-30 134.0 99 69.7
Sabra13G0098400 Salix brachista HOM05D007473 ORTHO05D009459 6.1e-30 134.0 95 73.7
SGA_v2.0_scaffold25G11079 Striga asiatica HOM05D007473 ORTHO05D009459 6.1e-30 134.0 93 74.2
QL02p034734 Quercus lobata HOM05D007473 ORTHO05D009459 8.0e-30 133.7 99 73.7
MSTRG.25424 Avicennia marina HOM05D007473 ORTHO05D009459 1.0e-29 133.3 98 69.4
Migut.C01206 Erythranthe guttata HOM05D007473 ORTHO05D009459 1.0e-29 133.3 94 75.5
Prupe.8G051200 Prunus persica HOM05D007473 ORTHO05D009459 5.2e-29 131.0 97 69.1
Cfa018218 Carpinus fangiana HOM05D007473 ORTHO05D009459 8.9e-29 130.2 100 69.0
TAR628G1168 Trochodendron aralioides HOM05D007473 ORTHO05D009459 1.5e-28 129.4 100 71.0
Cc00_g18070 Coffea canephora HOM05D007473 ORTHO05D009459 2.0e-28 129.0 98 68.4
MD05G1038600 Malus domestica HOM05D007473 ORTHO05D009459 4.4e-28 127.9 97 70.1
EL10Ac3g06462 Beta vulgaris HOM05D007473 ORTHO05D009459 7.5e-28 127.1 94 69.1
CANSAT25G2275 Cannabis sativa HOM05D007473 ORTHO05D009459 7.5e-28 127.1 99 69.7
Glyma.02G075700 Glycine max HOM05D007473 ORTHO05D009459 9.8e-28 126.7 108 65.7
Medtr1g097080 Medicago truncatula HOM05D007473 ORTHO05D009459 1.3e-27 126.3 97 74.2
Aqoxy5G02488 Aquilegia oxysepala HOM05D007473 ORTHO05D009459 1.7e-27 125.9 99 67.7
ClCG09G010330 Citrullus lanatus HOM05D007473 ORTHO05D009459 1.7e-27 125.9 94 71.3
Glyma.16G157600 Glycine max HOM05D007473 ORTHO05D009459 2.2e-27 125.6 106 67.0
MELO3C023649.2 Cucumis melo HOM05D007473 ORTHO05D009459 3.7e-27 124.8 94 70.2
CsaV3_7G024330 Cucumis sativus L. HOM05D007473 ORTHO05D009459 3.7e-27 124.8 94 71.3
AT1G71865 Arabidopsis thaliana HOM05D007473 ORTHO05D009459 6.4e-27 124.0 99 69.7
Oeu017869.1 Olea europaea HOM05D007473 ORTHO05D009459 6.4e-27 124.0 98 70.4
Sp5g26890 Schrenkiella parvula HOM05D007473 ORTHO05D009459 6.4e-27 124.0 103 66.0
SpUn0020_0080 Schrenkiella parvula HOM05D007473 ORTHO05D009459 6.4e-27 124.0 103 66.0
AL2G31450 Arabidopsis lyrata HOM05D007473 ORTHO05D009459 8.3e-27 123.6 99 69.7
EL10Ac8g20095 Beta vulgaris HOM05D007473 ORTHO05D009459 8.3e-27 123.6 94 67.0
Thhalv10019351m.g Eutrema salsugineum HOM05D007473 ORTHO05D009459 8.3e-27 123.6 103 66.0
Carub.0002s1863 Capsella rubella HOM05D007473 ORTHO05D009459 1.1e-26 123.2 99 68.7
Peaxi162Scf00476g00621 Petunia axillaris HOM05D007473 ORTHO05D009459 1.1e-26 123.2 89 69.7
Phvul.004G085900 Phaseolus vulgaris HOM05D007473 ORTHO05D009459 1.1e-26 123.2 106 66.0
Lalb_Chr01g0009921 Lupinus albus HOM05D007473 ORTHO05D009459 1.4e-26 122.9 105 64.8
VMungo0464G1647 Vigna mungo HOM05D007473 ORTHO05D009459 1.4e-26 122.9 107 65.4
CiPaw.15G006600 Carya illinoinensis HOM05D007473 ORTHO05D009459 1.8e-26 122.5 99 67.7
SalBow7G0569 Salvia bowleyana HOM05D007473 ORTHO05D009459 1.8e-26 122.5 98 70.4
Haze_17885 Corylus avellana HOM05D007473 ORTHO05D009459 2.4e-26 122.1 95 68.4
TPR.G30581 Trifolium pratense HOM05D007473 ORTHO05D009459 2.4e-26 122.1 98 71.4
MD10G1044400 Malus domestica HOM05D007473 ORTHO05D009459 4.1e-26 121.3 93 68.8
Nn1g08531 Nelumbo nucifera HOM05D007473 ORTHO05D009459 5.4e-26 120.9 100 69.0
CARHR290890 Cardamine hirsuta HOM05D007473 ORTHO05D009459 9.2e-26 120.2 93 72.0
Psat6g188360 Pisum sativum HOM05D007473 ORTHO05D009459 1.2e-25 119.8 100 70.0
ATR0584G170 Amborella trichopoda HOM05D007473 ORTHO05D009459 1.6e-25 119.4 95 63.2
THA.LOC104800103 Tarenaya hassleriana HOM05D007473 ORTHO05D009459 1.6e-25 119.4 92 73.9
BolC6t39645H Brassica oleracea HOM05D007473 ORTHO05D009459 5.9e-25 117.5 98 67.3
BraA07t31366Z Brassica rapa HOM05D007473 ORTHO05D009459 5.9e-25 117.5 98 67.3
Lalb_Chr19g0129841 Lupinus albus HOM05D007473 ORTHO05D009459 5.9e-25 117.5 103 63.1
Sed0021533 Sechium edule HOM05D007473 ORTHO05D009459 5.9e-25 117.5 95 65.3
EL10Ac1g01496 Beta vulgaris HOM05D007473 ORTHO05D009459 1.0e-24 116.7 94 66.0
BcaC08g46619 Brassica carinata HOM05D007473 ORTHO05D009459 1.0e-24 116.7 98 65.3
A07p38010 Brassica napus HOM05D007473 ORTHO05D009459 1.0e-24 116.7 98 65.3
CSS0009978 Camellia sinensis var. sinensis HOM05D007473 ORTHO05D009459 3.9e-24 114.8 89 69.7
Lj5g0014701 Lotus japonicus HOM05D007473 ORTHO05D009459 8.6e-24 113.6 103 62.1
PSO017G2761 Papaver somniferum HOM05D007473 ORTHO05D009459 1.5e-23 112.8 98 60.2
Aa31LG4G8770 Aethionema arabicum HOM05D007473 ORTHO05D009459 1.9e-23 112.5 93 67.7
Os01g0871350 Oryza sativa ssp. japonica HOM05D007473 ORTHO05D009459 1.2e-22 109.8 100 59.0
A07p30540 Brassica napus HOM05D007473 ORTHO05D009459 2.8e-22 108.6 103 63.1
BcaC08g45751 Brassica carinata HOM05D007473 ORTHO05D009459 3.6e-22 108.2 103 63.1
BolC6t38636H Brassica oleracea HOM05D007473 ORTHO05D009459 3.6e-22 108.2 103 63.1
C06p35300 Brassica napus HOM05D007473 ORTHO05D009459 6.2e-22 107.5 97 66.0
BraA07t30689Z Brassica rapa HOM05D007473 ORTHO05D009459 1.8e-21 105.9 103 62.1
Zm00001eb289250 Zea mays HOM05D007473 ORTHO05D009459 4.0e-21 104.8 94 60.6
EL10Ac8g20080 Beta vulgaris HOM05D007473 ORTHO05D009459 1.4e-18 96.3 89 62.9
BcaC08g46617 Brassica carinata HOM05D007473 ORTHO05D009459 4.1e-18 94.7 105 57.1
Hund27069 Selenicereus undatus HOM05D007473 ORTHO05D009459 4.1e-18 94.7 81 60.5
Aa31LG7G6620 Aethionema arabicum HOM05D007473 ORTHO05D009459 9.2e-18 93.6 79 67.1
SEGI_38346 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 3.5e-17 91.7 92 57.6
EL10Ac7g17167 Beta vulgaris HOM05D007473 ORTHO05D009459 1.3e-16 89.7 63 74.6
EL10Ac4g08661 Beta vulgaris HOM05D007473 ORTHO05D009459 5.0e-16 87.8 92 54.3
EL10Ac8g20008 Beta vulgaris HOM05D007473 ORTHO05D009459 5.6e-15 84.3 64 70.3
Zm00001eb348670 Zea mays HOM05D007473 ORTHO05D009459 2.8e-14 82.0 82 58.5
BcaB03g15623 Brassica carinata HOM05D007473 ORTHO05D009459 5.4e-10 67.8 105 48.6
SEGI_24301 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 1.5e-07 59.7 104 37.5
SEGI_05572 Sequoiadendron giganteum HOM05D007473 ORTHO05D009459 6.2e-06 54.3 71 39.4


User provided reference genes

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