Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 9.1e-96 353.6 182 100.0
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 9.5e-53 210.7 182 67.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 8.0e-52 207.6 182 64.8
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 2.3e-51 206.1 179 64.2
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 2.7e-47 192.6 182 62.1
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 5.0e-46 188.3 182 61.5
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 5.0e-46 188.3 182 62.1
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.1e-45 187.2 182 63.2
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 1.1e-45 187.2 182 63.2
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 1.5e-42 176.8 182 59.3
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 7.5e-42 174.5 190 58.9
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.7e-41 173.3 186 59.1
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 1.9e-40 169.9 186 57.5
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 3.2e-40 169.1 188 58.5
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 4.1e-40 168.7 178 60.1
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 7.1e-40 167.9 187 58.3
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 2.7e-39 166.0 182 54.4
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 3.9e-38 162.2 182 56.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 1.9e-37 159.8 186 56.5
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 3.6e-36 155.6 181 56.4
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.1e-35 154.1 186 53.8
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.4e-35 153.7 181 53.0
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 1.4e-35 153.7 188 53.2
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.4e-35 153.7 162 59.9
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 1.8e-35 153.3 191 51.3
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.3e-35 152.9 156 58.3
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 2.3e-35 152.9 183 52.5
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 3.1e-35 152.5 191 54.5
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 4.0e-35 152.1 186 50.5
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 4.4e-34 148.7 186 51.1
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 9.9e-34 147.5 181 51.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.2e-33 146.4 182 53.8
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 3.8e-33 145.6 180 53.9
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.8e-33 145.6 175 52.6
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 4.9e-33 145.2 180 53.9
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 4.9e-33 145.2 102 75.5
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 6.4e-33 144.8 102 74.5
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 8.4e-33 144.4 182 53.8
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.1e-32 144.1 184 51.6
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.4e-32 143.7 182 50.5
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.4e-32 143.7 182 53.3
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.4e-32 143.7 175 54.3
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 1.4e-32 143.7 173 55.5
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.4e-32 143.7 184 51.1
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.9e-32 143.3 184 53.8
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.4e-32 142.9 159 56.0
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 5.4e-32 141.7 182 52.7
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 9.2e-32 141.0 184 51.1
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.6e-31 140.2 104 75.0
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 4.6e-31 138.7 144 59.0
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 7.8e-31 137.9 185 50.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.3e-30 137.1 145 60.0
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.3e-30 137.1 145 58.6
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 1.7e-30 136.7 150 57.3
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.7e-30 136.7 145 58.6
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 2.3e-30 136.3 182 48.9
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 2.3e-30 136.3 182 49.5
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 3.0e-30 136.0 116 65.5
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 3.0e-30 136.0 172 51.2
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 5.1e-30 135.2 180 51.7
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 6.6e-30 134.8 105 68.6
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 6.6e-30 134.8 189 49.2
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 1.5e-29 133.7 103 73.8
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.5e-29 133.7 138 55.8
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.5e-29 133.7 138 55.8
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.5e-29 133.7 182 49.5
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 2.5e-29 132.9 145 57.9
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.5e-29 132.9 184 48.4
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.5e-29 132.9 184 48.4
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 2.5e-29 132.9 106 69.8
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 2.5e-29 132.9 107 68.2
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 2.5e-29 132.9 155 56.1
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 3.3e-29 132.5 148 58.1
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 4.3e-29 132.1 87 80.5
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 7.3e-29 131.3 145 58.6
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 9.6e-29 131.0 93 76.3
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 9.6e-29 131.0 99 70.7
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 9.6e-29 131.0 108 69.4
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 9.6e-29 131.0 136 58.8
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.2e-28 130.6 154 53.9
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.6e-28 130.2 87 81.6
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.6e-28 130.2 182 47.3
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.6e-28 130.2 86 82.6
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-28 129.8 122 60.7
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.1e-28 129.8 122 60.7
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 2.8e-28 129.4 186 47.3
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 2.8e-28 129.4 141 53.9
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 3.6e-28 129.0 107 66.4
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.6e-28 129.0 107 66.4
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 1.1e-27 127.5 183 49.7
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 1.1e-27 127.5 183 49.7
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.1e-27 127.5 183 49.7
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 1.1e-27 127.5 153 51.6
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.4e-27 127.1 118 61.0
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 4.0e-27 125.6 86 73.3
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.0e-27 125.6 87 77.0
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 4.0e-27 125.6 87 77.0
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 6.9e-27 124.8 182 48.9
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 2.0e-26 123.2 117 58.1
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 7.6e-26 121.3 87 67.8
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-25 120.6 174 46.0
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 2.9e-25 119.4 152 51.3
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 1.4e-24 117.1 169 46.7
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 2.1e-23 113.2 90 66.7
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 6.0e-23 111.7 81 72.8
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.0e-22 110.9 83 69.9
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 3.0e-22 109.4 87 72.4
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 7.3e-21 104.8 83 67.5
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.3e-20 104.0 88 63.6
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 8.1e-20 101.3 83 65.1
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.1e-19 100.9 65 81.5
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 1.2e-15 87.4 102 51.0
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 7.9e-15 84.7 90 53.3
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 7.9e-15 84.7 84 53.6
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.5e-13 80.5 87 54.0
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 8.1e-12 74.7 87 50.6
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.7e-09 67.0 56 62.5


User provided reference genes

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