Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 8.7e-226 786.6 377 100.0
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.0e-170 603.6 353 80.7
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 8.8e-170 600.5 362 78.5
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.2e-169 600.1 353 79.9
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 5.7e-169 597.8 359 78.8
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 2.4e-167 592.4 355 80.6
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 7.0e-167 590.9 353 80.2
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 7.7e-166 587.4 353 77.3
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 7.7e-166 587.4 358 77.1
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 5.0e-165 584.7 356 77.0
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.5e-164 583.2 351 77.8
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 2.5e-164 582.4 354 76.6
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 7.2e-164 580.9 355 76.9
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.6e-163 579.7 353 77.1
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 2.7e-163 578.9 330 82.4
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 3.6e-163 578.6 353 78.2
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.2e-161 573.5 365 75.1
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 2.0e-161 572.8 356 74.7
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 5.7e-161 571.2 353 76.8
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 9.8e-161 570.5 356 74.4
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 6.3e-160 567.8 356 74.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 4.5e-158 561.6 353 73.9
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 5.9e-158 561.2 353 74.2
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 7.7e-158 560.8 361 72.6
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 2.9e-157 558.9 353 73.4
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 6.6e-157 557.8 353 72.8
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 6.6e-157 557.8 370 70.8
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 8.6e-157 557.4 353 73.9
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 1.9e-156 556.2 353 73.9
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.5e-156 555.8 353 72.2
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 3.3e-156 555.4 353 72.0
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 3.3e-156 555.4 459 62.1
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 5.6e-156 554.7 353 73.7
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.2e-155 553.5 363 71.6
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 2.1e-155 552.7 386 68.4
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 6.8e-154 547.7 358 70.7
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 3.4e-153 545.4 358 70.7
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 7.5e-153 544.3 354 70.6
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 3.7e-152 542.0 354 70.6
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 4.1e-151 538.5 417 63.3
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 5.4e-151 538.1 352 69.6
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 3.5e-150 535.4 353 70.8
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.7e-149 533.1 417 62.8
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 8.6e-149 530.8 353 70.0
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 1.9e-148 529.6 354 69.8
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 5.6e-148 528.1 353 69.4
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 6.2e-147 524.6 354 71.2
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 3.1e-146 522.3 370 67.3
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 6.8e-146 521.2 356 68.5
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 8.3e-144 514.2 354 68.4
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.4e-143 512.7 360 69.4
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 3.2e-143 512.3 354 65.8
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 9.5e-140 500.7 330 70.0
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 1.6e-139 500.0 354 66.4
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 1.4e-138 496.9 507 53.3
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 1.4e-138 496.9 354 67.5
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 1.4e-138 496.9 354 67.5
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 5.2e-138 495.0 354 67.2
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 4.4e-137 491.9 354 63.3
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 1.1e-135 487.3 354 65.5
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 7.3e-132 474.6 358 64.0
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 5.2e-130 468.4 458 53.9
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 3.5e-126 455.7 374 61.0
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 1.8e-122 443.4 286 72.4
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 4.5e-97 359.0 290 60.7
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 1.6e-91 340.5 240 67.5
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 6.9e-90 335.1 362 45.9
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 2.6e-89 333.2 193 78.8
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 5.9e-89 332.0 197 75.1
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 3.0e-85 319.7 360 45.0
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.4e-82 310.1 343 49.0
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 2.4e-82 310.1 215 67.9
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 9.4e-71 271.6 249 57.4
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 2.2e-67 260.4 162 71.6
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 1.9e-63 247.3 151 72.8
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 7.2e-63 245.4 233 50.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 1.2e-60 238.0 160 74.4
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 2.0e-60 237.3 140 75.0
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 6.1e-54 215.7 359 35.4
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 8.0e-46 188.7 116 76.7
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 4.5e-41 172.9 128 64.8
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 1.3e-40 171.4 442 28.3
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 1.5e-36 157.9 402 29.4
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 2.1e-30 137.5 102 65.7
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 1.8e-29 134.4 103 63.1
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.1e-29 133.7 109 57.8
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.7e-27 127.9 113 58.4
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-27 127.5 74 75.7
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 2.2e-27 127.5 74 75.7
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 3.7e-27 126.7 72 79.2
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 1.1e-26 125.2 108 51.9
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.7e-24 117.9 71 70.4
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 5.0e-24 116.3 70 80.0
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 6.6e-24 115.9 70 78.6
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.5e-23 114.0 70 77.1
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 7.3e-23 112.5 70 77.1
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 1.4e-21 108.2 64 73.4
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 5.8e-20 102.8 295 26.8
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.9e-19 100.5 160 40.6
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.9e-18 97.8 83 54.2
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 5.4e-18 96.3 74 59.5
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.2e-17 95.1 91 57.1
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 8.1e-14 82.4 51 68.6
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 4.9e-11 73.2 68 50.0
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 1.9e-10 71.2 57 56.1
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 2.4e-10 70.9 91 44.0
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.2e-09 68.6 93 44.1


User provided reference genes

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