Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 3.5e-71 271.6 141 100.0
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 1.4e-56 223.0 141 80.9
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.4e-56 222.2 141 80.9
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 6.2e-52 207.6 140 79.3
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 2.0e-50 202.6 137 77.4
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 9.9e-50 200.3 144 74.3
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 1.1e-48 196.8 133 75.9
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 9.3e-48 193.7 147 71.4
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 9.3e-48 193.7 142 73.9
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 2.1e-47 192.6 142 71.8
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.1e-47 192.6 139 74.1
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 3.5e-47 191.8 133 72.9
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 3.5e-47 191.8 133 73.7
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 7.9e-47 190.7 139 73.4
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 1.0e-46 190.3 136 72.1
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.3e-46 189.9 139 73.4
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 1.8e-46 189.5 134 75.4
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 2.3e-46 189.1 142 72.5
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 5.1e-46 188.0 142 71.8
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 8.7e-46 187.2 142 71.8
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.5e-45 186.4 134 72.4
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.5e-45 186.4 143 73.4
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 2.5e-45 185.7 122 77.0
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 5.6e-45 184.5 146 70.5
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 5.6e-45 184.5 146 70.5
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 5.6e-45 184.5 140 69.3
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 7.4e-45 184.1 134 73.1
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 7.4e-45 184.1 134 73.9
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 7.4e-45 184.1 143 72.0
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 2.1e-44 182.6 139 70.5
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 3.7e-44 181.8 142 69.0
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 4.8e-44 181.4 136 71.3
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 4.8e-44 181.4 130 73.1
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 8.1e-44 180.6 136 71.3
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 8.1e-44 180.6 130 71.5
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 1.4e-43 179.9 123 72.4
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 3.1e-43 178.7 140 68.6
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 3.1e-43 178.7 123 71.5
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 4.0e-43 178.3 124 71.0
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 5.3e-43 177.9 136 66.2
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 6.9e-43 177.6 115 75.7
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 2.6e-42 175.6 134 69.4
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 3.4e-42 175.3 97 85.6
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 4.5e-42 174.9 142 69.0
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 5.8e-42 174.5 136 70.6
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 5.8e-42 174.5 101 84.2
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 6.5e-41 171.0 135 71.9
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 8.4e-41 170.6 125 69.6
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 1.1e-40 170.2 121 72.7
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 1.9e-40 169.5 143 63.6
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 2.5e-40 169.1 138 68.8
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 3.2e-40 168.7 133 66.9
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 5.5e-40 167.9 107 77.6
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 2.7e-39 165.6 114 72.8
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 3.5e-39 165.2 134 69.4
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 4.6e-39 164.9 129 70.5
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 6.0e-39 164.5 101 80.2
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 7.9e-39 164.1 115 71.3
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 1.3e-38 163.3 130 67.7
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 1.3e-38 163.3 125 68.0
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.9e-38 161.8 131 64.1
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 3.9e-38 161.8 110 75.5
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 3.9e-38 161.8 110 76.4
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 6.7e-38 161.0 101 79.2
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 6.7e-38 161.0 101 79.2
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 8.7e-38 160.6 105 78.1
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 2.5e-37 159.1 115 73.9
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 2.1e-36 156.0 126 66.7
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 2.1e-36 156.0 136 66.9
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 1.1e-35 153.7 109 68.8
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.4e-35 153.3 113 72.6
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 1.8e-35 152.9 114 67.5
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 1.8e-35 152.9 95 76.8
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 2.4e-35 152.5 121 67.8
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 3.1e-35 152.1 138 60.1
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 6.9e-35 151.0 108 73.1
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 6.9e-35 151.0 116 70.7
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 1.5e-34 149.8 142 53.5
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 2.0e-34 149.4 152 55.9
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 7.6e-34 147.5 136 58.1
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.3e-33 146.7 116 66.4
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.3e-33 146.7 139 56.8
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.2e-33 146.0 152 58.6
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 2.2e-33 146.0 134 58.2
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 8.5e-33 144.1 117 63.2
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 1.2e-31 140.2 120 65.8
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 2.1e-31 139.4 90 78.9
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 3.6e-31 138.7 114 65.8
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 4.6e-31 138.3 98 63.3
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 6.1e-31 137.9 118 65.3
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 6.1e-31 137.9 112 67.0
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.5e-29 133.3 105 64.8
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 7.4e-29 131.0 80 76.2
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 2.8e-28 129.0 95 65.3
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 3.1e-27 125.6 92 62.0
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 1.5e-26 123.2 63 87.3
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 4.5e-26 121.7 108 59.3
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 6.5e-25 117.9 104 59.6
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 5.5e-24 114.8 92 58.7
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 7.9e-23 110.9 63 76.2
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 3.0e-22 109.0 97 64.9
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 8.2e-20 100.9 100 54.0
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 5.5e-16 88.2 54 77.8
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 9.7e-13 77.4 42 81.0
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 1.7e-12 76.6 114 42.1
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 2.0e-10 69.7 85 47.1
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 4.5e-10 68.6 71 57.7


User provided reference genes

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