Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G062550 Manihot esculenta HOM05D012182 ORTHO05D011238 5.6e-119 431.4 299 100.0
Manes.06G045801 Manihot esculenta HOM05D012182 ORTHO05D011238 3.8e-83 312.4 281 79.0
Manes.15G153266 Manihot esculenta HOM05D012182 ORTHO05D011238 5.7e-63 245.4 281 68.0
Manes.14G027972 Manihot esculenta HOM05D012182 ORTHO05D000014 2.3e-56 223.4 302 69.2
Manes.18G138854 Manihot esculenta HOM05D012182 ORTHO05D011238 5.7e-55 218.8 207 82.1
Manes.04G059132 Manihot esculenta HOM05D012182 ORTHO05D011238 1.1e-53 214.5 222 66.7
Manes.07G082254 Manihot esculenta HOM05D012182 ORTHO05D011238 1.8e-48 197.2 200 67.0
Manes.14G163433 Manihot esculenta HOM05D012182 ORTHO05D011238 2.3e-48 196.8 281 67.3
Manes.17G022697 Manihot esculenta HOM05D012182 ORTHO05D011238 6.8e-40 168.7 89 93.3
Manes.05G127901 Manihot esculenta HOM05D012182 ORTHO05D011238 7.0e-37 158.7 93 89.2
Manes.02G210140 Manihot esculenta HOM05D000023 ORTHO05D000014 3.6e-25 119.8 87 65.5
CSS0017579 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-20 102.4 66 66.7
CSS0044422 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 6.0e-20 102.4 66 66.7
CSS0045728 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.0e-19 101.7 66 65.2
CSS0004804 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.3e-19 101.3 66 66.7
CSS0006701 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.3e-19 101.3 66 65.2
CSS0026734 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-19 100.9 66 65.2
CSS0049353 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 5.1e-19 99.4 66 65.2
CSS0045108 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.6e-19 98.6 66 65.2
Hund10834 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.0e-15 87.4 105 46.7
Hund03452 Selenicereus undatus HOM05D000185 ORTHO05D000014 2.6e-15 87.0 89 50.6
Hund20069 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.4e-15 86.3 89 51.7
Ah.03g144780 Amaranthus hybridus HOM05D000023 ORTHO05D000014 5.8e-15 85.9 133 38.3
Ah.06g187040 Amaranthus hybridus HOM05D012182 ORTHO05D011238 7.6e-15 85.5 88 46.6
Hund00853 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-15 85.1 76 53.9
Hund04216 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-15 85.1 100 47.0
Hund08340 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-15 85.1 105 45.7
Hund09860 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.9e-15 85.1 100 47.0
Gohir.D08G172950 Gossypium hirsutum HOM05D001165 ORTHO05D001347 1.3e-14 84.7 88 50.0
Gorai.005G223300 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.3e-14 84.7 88 50.0
Gorai.010G071800 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.3e-14 84.7 88 50.0
Gorai.011G148700 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.3e-14 84.7 88 50.0
Hund22679 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-14 84.7 105 44.8
Hund01377 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.7e-14 84.3 100 46.0
AUR62017483 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.2e-14 84.0 76 51.3
TPR.G32077 Trifolium pratense HOM05D000023 ORTHO05D000014 2.2e-14 84.0 65 61.5
TPR.G40251 Trifolium pratense HOM05D008981 ORTHO05D011238 2.2e-14 84.0 66 62.1
Rhsim05G0096600 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.9e-14 82.8 98 44.9
Hund09827 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-14 82.8 89 48.3
Hund25537 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-14 82.8 89 48.3
Hund26432 Selenicereus undatus HOM05D000023 ORTHO05D000014 4.9e-14 82.8 107 43.0
Gohir.A01G142850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 6.4e-14 82.4 67 55.2
Hund15541 Selenicereus undatus HOM05D000023 ORTHO05D009195 6.4e-14 82.4 113 44.2
Gorai.002G161200 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.1e-13 81.6 88 48.9
Gorai.007G113800 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.1e-13 81.6 66 56.1
AUR62034279 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.4e-13 81.3 65 56.9
Psat1g136240 Pisum sativum HOM05D008981 ORTHO05D011238 1.4e-13 81.3 59 62.7
Hund17894 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.9e-13 80.9 105 43.8
Manes.09G075056 Manihot esculenta HOM05D012182 ORTHO05D011238 2.4e-13 80.5 298 36.9
Gorai.007G179100 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.4e-13 79.3 88 47.7
Hund19738 Selenicereus undatus HOM05D000023 ORTHO05D003407 2.1e-12 77.4 102 39.2
Gorai.002G112900 Gossypium raimondii HOM05D000023 ORTHO05D000014 2.7e-12 77.0 67 52.2
Hund17666 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.7e-12 77.0 114 36.8
Hund18171 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.0e-12 75.9 102 45.1
TAR500G0002 Trochodendron aralioides HOM05D000023 ORTHO05D000014 6.0e-12 75.9 76 55.3
Gohir.A06G098402 Gossypium hirsutum HOM05D000023 ORTHO05D000014 1.0e-11 75.1 67 50.7
Gorai.001G146900 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.0e-11 75.1 67 50.7
Hund00663 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.3e-11 74.7 68 47.1
Dinv15899 Davidia involucrata HOM05D013973 ORTHO05D011238 2.3e-11 73.9 94 41.5
Dinv21131 Davidia involucrata HOM05D013973 ORTHO05D011238 3.9e-11 73.2 51 60.8
PGR031G2426 Punica granatum HOM05D000023 ORTHO05D000014 8.7e-11 72.0 98 43.9
Dinv01017 Davidia involucrata HOM05D013973 ORTHO05D011238 1.3e-09 68.2 48 58.3
Gorai.011G164900 Gossypium raimondii HOM05D000023 ORTHO05D009195 1.3e-09 68.2 56 53.6
Cc09_g09560 Coffea canephora HOM05D000023 ORTHO05D000014 1.1e-08 65.1 64 51.6
Actinidia31591 Actinidia chinensis HOM05D013973 ORTHO05D011238 1.4e-08 64.7 56 57.1
Duzib063G0003 Durio zibethinus HOM05D053098 ORTHO05D011238 3.1e-08 63.5 69 43.5
Psat7g035080 Pisum sativum HOM05D008981 ORTHO05D011238 4.0e-08 63.2 49 61.2
Gorai.007G268400 Gossypium raimondii HOM05D000023 ORTHO05D000014 9.0e-08 62.0 88 43.2
Hund04619 Selenicereus undatus HOM05D000023 ORTHO05D000014 1.5e-07 61.2 68 45.6
MBI06_g29492_MAGBIO Magnolia biondii HOM05D008550 ORTHO05D000014 2.0e-07 60.8 89 43.8
Hund17738 Selenicereus undatus HOM05D000023 ORTHO05D000014 3.4e-07 60.1 68 45.6
Psat2g165840 Pisum sativum HOM05D008981 ORTHO05D011238 4.4e-07 59.7 47 59.6
MBI10_g11204_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 7.6e-07 58.9 68 44.1
Gorai.013G087500 Gossypium raimondii HOM05D000023 ORTHO05D000014 1.3e-06 58.2 48 54.2
MBI08_g14973_MAGBIO Magnolia biondii HOM05D008550 ORTHO05D000014 1.7e-06 57.8 68 45.6
Psat1g141520 Pisum sativum HOM05D008981 ORTHO05D011238 1.7e-06 57.8 49 57.1
Hund09996 Selenicereus undatus HOM05D000023 ORTHO05D009195 1.7e-06 57.8 51 51.0
MBI05_g34738_MAGBIO Magnolia biondii HOM05D008550 ORTHO05D000014 3.8e-06 56.6 63 49.2
Rhsim04G0084200 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.9e-06 56.2 45 53.3
MBI03_g25744_MAGBIO Magnolia biondii HOM05D008925 ORTHO05D009195 8.4e-06 55.5 84 39.3
MBI16_g36975_MAGBIO Magnolia biondii HOM05D008550 ORTHO05D000014 8.4e-06 55.5 71 43.7
Hund13352 Selenicereus undatus HOM05D000023 ORTHO05D001383 8.4e-06 55.5 77 40.3


User provided reference genes

Program Settings