Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G055200 Manihot esculenta HOM05D005719 ORTHO05D007030 1.2e-280 969.1 496 100.0
Sabra02G0085500 Salix brachista HOM05D005719 ORTHO05D007030 8.2e-200 700.7 499 72.1
TWI56G1147 Tripterygium wilfordii HOM05D005719 ORTHO05D007030 6.1e-187 657.9 499 70.3
CiPaw.07G161600 Carya illinoinensis HOM05D005719 ORTHO05D007030 9.2e-183 644.0 464 70.3
Gohir.A05G217800 Gossypium hirsutum HOM05D005719 ORTHO05D007030 8.6e-181 637.5 499 68.1
Haze_22505 Corylus avellana HOM05D005719 ORTHO05D007030 3.6e-179 632.1 521 65.6
Gorai.009G226700 Gossypium raimondii HOM05D005719 ORTHO05D007030 6.1e-179 631.3 499 67.3
Duzib093G1837 Durio zibethinus HOM05D005719 ORTHO05D007030 1.4e-178 630.2 497 66.0
Prupe.1G540100 Prunus persica HOM05D005719 ORTHO05D007030 8.9e-178 627.5 503 65.6
QL12p040011 Quercus lobata HOM05D005719 ORTHO05D007030 1.2e-177 627.1 500 67.4
Gohir.D05G219700 Gossypium hirsutum HOM05D005719 ORTHO05D007030 1.5e-177 626.7 499 67.3
MD15G1392600 Malus domestica HOM05D005719 ORTHO05D007030 2.0e-177 626.3 503 65.4
CiPaw.08G058000 Carya illinoinensis HOM05D005719 ORTHO05D007030 3.4e-177 625.5 493 66.7
MD08G1208600 Malus domestica HOM05D005719 ORTHO05D007030 5.7e-177 624.8 509 64.6
Thecc.08G076500 Theobroma cacao HOM05D005719 ORTHO05D007030 3.2e-175 619.0 499 66.7
CANSAT21G2028 Cannabis sativa HOM05D005719 ORTHO05D007030 1.3e-173 613.6 502 63.7
Cfa013832 Carpinus fangiana HOM05D000446 ORTHO05D000321 5.6e-172 608.2 474 67.5
Ciclev10000979m.g Citrus clementina HOM05D005719 ORTHO05D007030 9.5e-172 607.4 495 64.2
Manes.05G187400 Manihot esculenta HOM05D005719 ORTHO05D007030 2.1e-171 606.3 392 79.1
TAR628G1450 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.0e-170 604.0 494 65.0
GSVIVG01009231001 Vitis vinifera HOM05D005719 ORTHO05D007030 2.3e-170 602.8 439 69.9
RcHm_v2.0_Chr7g0233191 Rosa chinensis HOM05D005719 ORTHO05D007030 3.1e-170 602.4 508 63.2
CSS0009932 Camellia sinensis var. sinensis HOM05D005719 ORTHO05D007030 1.5e-169 600.1 501 64.3
Actinidia19605 Actinidia chinensis HOM05D005719 ORTHO05D007030 3.5e-166 589.0 496 63.3
vmacro04622 Vaccinium macrocarpon HOM05D005719 ORTHO05D007030 3.9e-165 585.5 497 61.8
Phvul.009G145500 Phaseolus vulgaris HOM05D005719 ORTHO05D007030 1.5e-164 583.6 495 62.0
Duzib041G0544 Durio zibethinus HOM05D005719 ORTHO05D007030 5.6e-164 581.6 499 63.7
arahy.Tifrunner.gnm1.ann1.SLT0HR Arachis hypogaea HOM05D005719 ORTHO05D007030 2.1e-163 579.7 492 63.2
Glyma.06G092200 Glycine max HOM05D005719 ORTHO05D007030 8.1e-163 577.8 496 61.9
FvH4_5g33860 Fragaria vesca HOM05D005719 ORTHO05D007030 6.8e-162 574.7 503 60.4
arahy.Tifrunner.gnm1.ann1.I1WLRD Arachis hypogaea HOM05D005719 ORTHO05D007030 1.2e-161 573.9 492 62.8
Lalb_Chr11g0064791 Lupinus albus HOM05D005719 ORTHO05D007030 9.8e-161 570.9 492 60.6
Hma1.2p1_0010F.1_g006360 Hydrangea macrophylla HOM05D005719 ORTHO05D007030 1.3e-160 570.5 492 61.6
Psat5g018640 Pisum sativum HOM05D005719 ORTHO05D007030 2.2e-160 569.7 494 59.3
TAR381G0820 Trochodendron aralioides HOM05D005719 ORTHO05D007030 2.2e-160 569.7 495 61.2
Glyma.04G090400 Glycine max HOM05D005719 ORTHO05D007030 3.7e-160 568.9 494 61.5
Atru.chr13.942 Acer truncatum HOM05D005719 ORTHO05D007030 8.3e-160 567.8 503 62.0
Medtr3g111330 Medicago truncatula HOM05D005719 ORTHO05D007030 3.2e-159 565.8 507 58.6
Eucgr.F02170 Eucalyptus grandis HOM05D005719 ORTHO05D007030 3.5e-158 562.4 497 61.2
TPR.G12418 Trifolium pratense HOM05D005719 ORTHO05D007030 3.0e-157 559.3 493 58.8
Lj1g0010479 Lotus japonicus HOM05D005719 ORTHO05D007030 5.6e-156 555.1 493 59.6
PGR031G2819 Punica granatum HOM05D005719 ORTHO05D007030 5.6e-156 555.1 495 60.8
COL.COLO4_35322 Corchorus olitorius HOM05D005719 ORTHO05D007030 7.3e-156 554.7 496 62.3
ClCG11G014800 Citrullus lanatus HOM05D005719 ORTHO05D007030 9.5e-156 554.3 493 58.2
EL10Ac1g02246 Beta vulgaris HOM05D005719 ORTHO05D007030 6.2e-155 551.6 499 58.9
Thhalv10004086m.g Eutrema salsugineum HOM05D005719 ORTHO05D007030 6.2e-155 551.6 501 57.9
Sp2g17320 Schrenkiella parvula HOM05D005719 ORTHO05D007030 1.4e-154 550.4 497 58.4
VMungo1309G0989 Vigna mungo HOM05D005719 ORTHO05D007030 2.3e-154 549.7 466 61.8
Cc10_g08220 Coffea canephora HOM05D005719 ORTHO05D007030 6.8e-154 548.1 500 59.6
FAN08G1402 Fragaria x ananassa HOM05D005719 ORTHO05D007030 8.9e-154 547.7 571 53.6
Oeu035376.1 Olea europaea HOM05D005719 ORTHO05D007030 8.9e-154 547.7 494 58.7
PSO700G0171 Papaver somniferum HOM05D005719 ORTHO05D007030 2.0e-153 546.6 485 59.6
Cpa.g.sc177.3 Carica papaya HOM05D005719 ORTHO05D007030 2.6e-153 546.2 415 67.7
Sed0009724 Sechium edule HOM05D005719 ORTHO05D007030 4.4e-153 545.4 472 59.7
Nitab4.5_0001608g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 2.2e-152 543.1 497 58.8
Sc02g0008400 Simmondsia chinensis HOM05D005719 ORTHO05D007030 3.8e-152 542.3 502 57.6
BcaC06g30902 Brassica carinata HOM05D005719 ORTHO05D007030 1.4e-151 540.4 501 57.5
ECA240G4523 Erigeron canadensis HOM05D005719 ORTHO05D007030 2.7e-150 536.2 496 57.7
PSO761G0268 Papaver somniferum HOM05D005719 ORTHO05D007030 2.7e-150 536.2 450 60.7
Hund05222 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.5e-148 530.4 502 57.2
THA.LOC104823811 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 3.3e-148 529.3 493 56.6
Carub.0005s0719 Capsella rubella HOM05D005719 ORTHO05D007030 5.6e-148 528.5 493 57.2
HanXRQChr03g0065451 Helianthus annuus HOM05D005719 ORTHO05D007030 5.6e-148 528.5 490 56.9
TPR.G21947 Trifolium pratense HOM05D005719 ORTHO05D007030 7.3e-148 528.1 468 59.0
Migut.C00296 Erythranthe guttata HOM05D005719 ORTHO05D007030 1.6e-147 526.9 496 55.8
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 2.1e-147 526.6 487 57.9
CsaV3_3G048210 Cucumis sativus L. HOM05D005719 ORTHO05D007030 2.8e-147 526.2 493 56.4
AL5G18300 Arabidopsis lyrata HOM05D005719 ORTHO05D007030 8.1e-147 524.6 497 57.3
THA.LOC104805699 Tarenaya hassleriana HOM05D005719 ORTHO05D007030 5.8e-145 518.5 492 56.1
CARHR286650 Cardamine hirsuta HOM05D005719 ORTHO05D007030 2.2e-144 516.5 502 55.6
BcaC06g33632 Brassica carinata HOM05D005719 ORTHO05D007030 1.9e-143 513.5 501 55.7
AT3G28670 Arabidopsis thaliana HOM05D005719 ORTHO05D007030 2.4e-143 513.1 496 55.8
C07p37630 Brassica napus HOM05D005719 ORTHO05D007030 2.4e-143 513.1 501 55.7
A06p40410 Brassica napus HOM05D005719 ORTHO05D007030 5.4e-143 511.9 502 55.6
BraA06t26959Z Brassica rapa HOM05D005719 ORTHO05D007030 5.4e-143 511.9 502 55.6
Lsat_1_v5_gn_7_55820 Lactuca sativa HOM05D005719 ORTHO05D007030 9.3e-143 511.1 505 55.8
Aa31LG2G4530 Aethionema arabicum HOM05D005719 ORTHO05D007030 2.1e-142 510.0 497 55.3
FAN18G0583 Fragaria x ananassa HOM05D005719 ORTHO05D007030 2.1e-142 510.0 432 61.6
MSTRG.25002 Avicennia marina HOM05D005719 ORTHO05D007030 2.7e-142 509.6 499 55.9
BolC7t44279H Brassica oleracea HOM05D005719 ORTHO05D007030 6.0e-142 508.4 502 55.6
Sopen02g003330 Solanum pennellii HOM05D005719 ORTHO05D007030 7.8e-142 508.1 500 56.2
MBI16_g44752_MAGBIO Magnolia biondii HOM05D005719 ORTHO05D007030 1.7e-141 506.9 435 61.6
Solyc02g014380.3 Solanum lycopersicum HOM05D005719 ORTHO05D007030 8.7e-141 504.6 500 56.0
Dinv44886 Davidia involucrata HOM05D005719 ORTHO05D007030 2.4e-138 496.5 401 65.8
Nn1g05685 Nelumbo nucifera HOM05D005719 ORTHO05D007030 2.7e-134 483.0 495 54.1
CAN.G1751.8 Capsicum annuum HOM05D005719 ORTHO05D007030 2.8e-131 473.0 524 51.3
Ca_15541_v3 Cicer arietinum L. HOM05D005719 ORTHO05D007030 3.6e-131 472.6 494 53.0
Nitab4.5_0000681g0030 Nicotiana tabacum HOM05D005719 ORTHO05D007030 1.1e-127 461.1 498 53.6
unitig_749.g13864 Utricularia gibba HOM05D005719 ORTHO05D000442 3.2e-127 459.5 500 52.4
AUR62035419 Chenopodium quinoa HOM05D005719 ORTHO05D007030 5.5e-127 458.8 554 48.6
SGA_v2.0_scaffold14G07072 Striga asiatica HOM05D005719 ORTHO05D007030 2.7e-126 456.4 524 50.2
Rhsim07G0214600 Rhododendron simsii HOM05D005719 ORTHO05D007030 3.0e-125 453.0 370 64.6
CAN.G1921.11 Capsicum annuum HOM05D005719 ORTHO05D007030 1.9e-119 433.7 501 49.5
HPP92_028121 Vanilla planifolia HOM05D005719 ORTHO05D007030 6.0e-118 428.7 491 47.7
Peaxi162Scf01397g00011 Petunia axillaris HOM05D005719 ORTHO05D007030 1.0e-117 427.9 347 63.1
HPP92_020868 Vanilla planifolia HOM05D005719 ORTHO05D007030 1.3e-117 427.6 491 47.5
MELO3C003498.2 Cucumis melo HOM05D005719 ORTHO05D007030 3.3e-116 422.9 363 60.3
PGSC0003DMG400019103 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.1e-114 417.9 498 50.8
Potri.002G108700 Populus trichocarpa HOM05D005719 ORTHO05D007030 3.3e-108 396.4 254 79.5
Ah.00g000110 Amaranthus hybridus HOM05D005719 ORTHO05D007030 1.4e-106 391.0 403 53.3
CDE07G0720 Ceratophyllum demersum HOM05D005719 ORTHO05D007030 2.0e-105 387.1 496 45.8
Os08g0101400 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.4e-103 380.9 490 45.5
SalBow7G1913 Salvia bowleyana HOM05D005719 ORTHO05D007030 1.3e-99 367.9 400 51.2
Actinidia29649 Actinidia chinensis HOM05D005719 ORTHO05D007030 2.3e-93 347.1 362 54.7
PGSC0003DMG400019007 Solanum tuberosum HOM05D005719 ORTHO05D007030 1.0e-85 321.6 500 43.6
Mapoly0053s0027 Marchantia polymorpha HOM05D005719 ORTHO05D007030 2.4e-74 283.9 497 36.6
Pp3c26_6510 Physcomitrium patens HOM05D005719 ORTHO05D007030 1.9e-71 274.2 510 37.5
TAR381G1016 Trochodendron aralioides HOM05D005719 ORTHO05D007030 8.9e-69 265.4 193 72.0
AUR62035705 Chenopodium quinoa HOM05D005719 ORTHO05D007030 7.0e-66 255.8 291 48.1
Os10g0188900 Oryza sativa ssp. japonica HOM05D005719 ORTHO05D007030 1.6e-65 254.6 280 49.3
TAR381G0292 Trochodendron aralioides HOM05D005719 ORTHO05D007030 1.9e-63 247.7 237 57.4
HanXRQChr16g0499811 Helianthus annuus HOM05D005719 ORTHO05D007030 3.9e-56 223.4 351 40.5
Lju279A4T8 Lonicera japonica HOM05D005719 ORTHO05D007030 1.5e-55 221.5 173 64.2
SMO118G0237 Selaginella moellendorffii HOM05D005719 ORTHO05D007030 1.2e-54 218.4 433 35.6
Zm00001eb198670 Zea mays HOM05D005719 ORTHO05D007030 1.8e-53 214.5 283 45.6
BcaB04g19478 Brassica carinata HOM05D005719 ORTHO05D007030 1.2e-52 211.8 280 45.0
AUR62035707 Chenopodium quinoa HOM05D005719 ORTHO05D007030 1.8e-45 188.0 138 68.1
Duzib116G0315 Durio zibethinus HOM05D005719 ORTHO05D007030 2.0e-44 184.5 140 67.1
ATR0144G003 Amborella trichopoda HOM05D005719 ORTHO05D007030 8.6e-40 169.1 243 42.0
Lju170A15T23 Lonicera japonica HOM05D005719 ORTHO05D007030 2.5e-39 167.5 108 75.0
AagrBONN_evm.TU.Sc2ySwM_369.438 Anthoceros agrestis HOM05D005719 ORTHO05D007030 4.1e-34 150.2 278 34.2
ATR0800G070 Amborella trichopoda HOM05D005719 ORTHO05D007030 2.7e-33 147.5 136 58.1
CBR_g38241 Chara braunii HOM05D005719 ORTHO05D007030 2.7e-33 147.5 404 29.0
Hund16029 Selenicereus undatus HOM05D005719 ORTHO05D007030 1.2e-30 138.7 247 36.8
Oeu035375.1 Olea europaea HOM05D005719 ORTHO05D007030 3.6e-30 137.1 172 47.7
SEGI_36882 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 4.7e-30 136.7 140 55.0
Lju170A15T24 Lonicera japonica HOM05D005719 ORTHO05D007030 1.2e-28 132.1 109 65.1
COL.COLO4_23153 Corchorus olitorius HOM05D005719 ORTHO05D007030 9.9e-28 129.0 172 49.4
Peaxi162Scf01397g00010 Petunia axillaris HOM05D005719 ORTHO05D007030 4.5e-20 103.6 135 44.4
Lju279C4T1 Lonicera japonica HOM05D005719 ORTHO05D007030 3.3e-15 87.4 109 47.7
SEGI_23985 Sequoiadendron giganteum HOM05D005719 ORTHO05D007030 1.4e-13 82.0 105 38.1
Cre12.g551000 Chlamydomonas reinhardtii HOM05D005719 ORTHO05D007030 2.2e-11 74.7 438 20.5
C05p32060 Brassica napus HOM05D005719 ORTHO05D007030 9.3e-10 69.3 93 48.4
BolC5t31933H Brassica oleracea HOM05D005719 ORTHO05D007030 9.3e-10 69.3 93 48.4
Pp3c4_19380 Physcomitrium patens HOM05D005719 ORTHO05D007030 8.2e-06 56.2 117 30.8


User provided reference genes

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