Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G053600 Manihot esculenta HOM05D001656 ORTHO05D005043 0.0e+00 1122.5 559 100.0
Potri.019G077600 Populus trichocarpa HOM05D001656 ORTHO05D005043 2.4e-280 968.4 556 84.4
Sabra19G0088700 Salix brachista HOM05D001656 ORTHO05D005043 1.4e-275 952.6 557 82.6
Cpa.g.sc160.9 Carica papaya HOM05D001656 ORTHO05D005043 5.7e-274 947.2 556 81.8
Thecc.08G080000 Theobroma cacao HOM05D001656 ORTHO05D005043 2.2e-273 945.3 559 82.3
QL12p040536 Quercus lobata HOM05D001656 ORTHO05D005043 2.9e-270 934.9 557 81.9
Duzib041G0753 Durio zibethinus HOM05D001656 ORTHO05D005043 5.5e-269 930.6 557 82.0
COL.COLO4_35356 Corchorus olitorius HOM05D001656 ORTHO05D005043 1.6e-268 929.1 567 80.4
Gohir.D05G217900 Gossypium hirsutum HOM05D001656 ORTHO05D005043 2.1e-268 928.7 557 81.0
Gorai.009G224700 Gossypium raimondii HOM05D001656 ORTHO05D005043 3.6e-268 927.9 557 81.0
GSVIVG01009259001 Vitis vinifera HOM05D001656 ORTHO05D005043 1.4e-267 926.0 559 80.0
Gohir.A05G214600 Gossypium hirsutum HOM05D001656 ORTHO05D005043 2.3e-267 925.2 557 80.8
Eucgr.F00471 Eucalyptus grandis HOM05D001656 ORTHO05D005043 4.8e-265 917.5 557 79.0
Lalb_Chr11g0064681 Lupinus albus HOM05D001656 ORTHO05D005043 8.2e-265 916.8 557 79.5
TWI56G0239 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 2.0e-263 912.1 557 78.3
Duzib093G1672 Durio zibethinus HOM05D001656 ORTHO05D005043 3.5e-263 911.4 543 82.0
Actinidia19273 Actinidia chinensis HOM05D001656 ORTHO05D005043 7.7e-263 910.2 557 79.5
Ciclev10000739m.g Citrus clementina HOM05D001656 ORTHO05D005043 7.7e-263 910.2 559 78.4
Glyma.04G088400 Glycine max HOM05D001656 ORTHO05D005043 1.3e-262 909.4 557 79.9
Actinidia10250 Actinidia chinensis HOM05D001656 ORTHO05D005043 1.5e-261 906.0 557 79.2
Sed0025136 Sechium edule HOM05D001656 ORTHO05D005043 5.5e-261 904.0 559 78.9
CANSAT25G3831 Cannabis sativa HOM05D001656 ORTHO05D005043 9.4e-261 903.3 557 79.5
Cfa020711 Carpinus fangiana HOM05D001656 ORTHO05D005043 1.6e-260 902.5 557 79.2
TPR.G12406 Trifolium pratense HOM05D001656 ORTHO05D005043 2.7e-260 901.7 560 78.2
Lj1g0025512 Lotus japonicus HOM05D001656 ORTHO05D005043 8.0e-260 900.2 559 78.7
TAR381G0234 Trochodendron aralioides HOM05D001656 ORTHO05D005043 1.0e-259 899.8 557 77.9
CAN.G1801.4 Capsicum annuum HOM05D001656 ORTHO05D005043 1.4e-259 899.4 557 78.3
Haze_19016 Corylus avellana HOM05D001656 ORTHO05D005043 3.0e-259 898.3 557 79.2
CsaV3_6G036230 Cucumis sativus L. HOM05D001656 ORTHO05D005043 5.2e-259 897.5 559 78.5
vmacro21383 Vaccinium macrocarpon HOM05D001656 ORTHO05D005043 5.2e-259 897.5 557 77.7
PGR083G1861 Punica granatum HOM05D001656 ORTHO05D005043 1.5e-258 896.0 559 77.3
Medtr3g110710 Medicago truncatula HOM05D001656 ORTHO05D005043 3.4e-258 894.8 559 77.8
Cc10_g08000 Coffea canephora HOM05D001656 ORTHO05D005043 9.8e-258 893.3 557 77.0
VMungo1309G0971 Vigna mungo HOM05D001656 ORTHO05D005043 9.8e-258 893.3 559 77.6
arahy.Tifrunner.gnm1.ann1.AQ9I9J Arachis hypogaea HOM05D001656 ORTHO05D005043 1.3e-257 892.9 558 77.1
Lsat_1_v5_gn_2_121140 Lactuca sativa HOM05D001656 ORTHO05D005043 1.3e-257 892.9 560 77.9
Atru.chr13.919 Acer truncatum HOM05D001656 ORTHO05D005043 2.2e-257 892.1 559 78.0
Ca_15555_v3 Cicer arietinum L. HOM05D001656 ORTHO05D005043 2.2e-257 892.1 560 77.5
arahy.Tifrunner.gnm1.ann1.UN376R Arachis hypogaea HOM05D001656 ORTHO05D005043 6.3e-257 890.6 558 76.9
Phvul.009G114000 Phaseolus vulgaris HOM05D001656 ORTHO05D005043 1.1e-256 889.8 560 76.8
TWI36G0349 Tripterygium wilfordii HOM05D001656 ORTHO05D005043 1.4e-256 889.4 557 77.9
PGSC0003DMG400004938 Solanum tuberosum HOM05D001656 ORTHO05D005043 2.4e-256 888.6 558 77.2
Solyc04g077040.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 4.1e-256 887.9 558 77.4
Nitab4.5_0006011g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.2e-255 886.3 574 76.0
CiPaw.15G153300 Carya illinoinensis HOM05D001656 ORTHO05D005043 2.0e-255 885.6 553 77.9
Rhsim06G0067500 Rhododendron simsii HOM05D001656 ORTHO05D005043 2.3e-254 882.1 557 77.0
Aqoxy5G02659 Aquilegia oxysepala HOM05D001656 ORTHO05D005043 5.0e-254 880.9 556 76.6
PSO447G0306 Papaver somniferum HOM05D001656 ORTHO05D005043 6.5e-254 880.6 557 76.8
Nitab4.5_0003791g0030 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.5e-253 879.4 558 77.1
MSTRG.915 Avicennia marina HOM05D001656 ORTHO05D005043 1.9e-253 879.0 557 76.1
SalBow7G3472 Salvia bowleyana HOM05D001656 ORTHO05D005043 3.3e-253 878.2 557 76.7
THA.LOC104799841 Tarenaya hassleriana HOM05D001656 ORTHO05D005043 7.2e-253 877.1 556 76.4
Manes.05G186400 Manihot esculenta HOM05D001656 ORTHO05D005043 1.2e-252 876.3 488 88.1
Hma1.2p1_1078F.1_g254805 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 4.7e-252 874.4 558 75.8
Nn6g32050 Nelumbo nucifera HOM05D001656 ORTHO05D005043 4.7e-252 874.4 557 76.8
MBI16_g26737_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 1.4e-251 872.8 553 75.9
ClCG08G008920 Citrullus lanatus HOM05D001656 ORTHO05D005043 3.0e-251 871.7 557 77.6
Lj4C747T6 Lonicera japonica HOM05D001656 ORTHO05D005043 6.8e-251 870.5 576 74.0
Ah.11g038980 Amaranthus hybridus HOM05D001656 ORTHO05D005043 1.5e-250 869.4 557 75.0
DCAR_020038 Daucus carota HOM05D001656 ORTHO05D005043 2.6e-250 868.6 557 76.3
FvH4_5g33550 Fragaria vesca HOM05D001656 ORTHO05D005043 3.4e-250 868.2 558 75.4
Dinv22032 Davidia involucrata HOM05D001656 ORTHO05D005043 4.9e-249 864.4 540 78.5
Migut.C00423 Erythranthe guttata HOM05D001656 ORTHO05D005043 4.9e-249 864.4 557 75.4
AL8G23490 Arabidopsis lyrata HOM05D001656 ORTHO05D005043 2.0e-247 859.0 556 75.4
Lj4A79T57 Lonicera japonica HOM05D001656 ORTHO05D005043 2.0e-247 859.0 557 74.5
SpUn0011_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 2.7e-247 858.6 556 75.4
SpUn0057_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 2.7e-247 858.6 556 75.4
SpUn0134_0020 Schrenkiella parvula HOM05D001656 ORTHO05D005043 2.7e-247 858.6 556 75.4
AT5G49650 Arabidopsis thaliana HOM05D001656 ORTHO05D005043 4.5e-247 857.8 556 74.8
Sopen00g004570 Solanum pennellii HOM05D001656 ORTHO05D005043 7.8e-247 857.1 537 77.5
AUR62035764 Chenopodium quinoa HOM05D001656 ORTHO05D005043 6.6e-246 854.0 557 75.0
Carub.0008s0951 Capsella rubella HOM05D001656 ORTHO05D005043 1.1e-245 853.2 556 75.0
Oeu035948.1 Olea europaea HOM05D001656 ORTHO05D005043 1.5e-245 852.8 557 74.7
AUR62034954 Chenopodium quinoa HOM05D001656 ORTHO05D005043 1.9e-245 852.4 557 74.9
ECA247G3818 Erigeron canadensis HOM05D001656 ORTHO05D005043 4.3e-245 851.3 556 74.8
RcHm_v2.0_Chr7g0232371 Rosa chinensis HOM05D001656 ORTHO05D005043 2.1e-244 849.0 558 74.0
Prupe.1G542700 Prunus persica HOM05D001656 ORTHO05D005043 2.8e-244 848.6 558 74.0
Thhalv10013140m.g Eutrema salsugineum HOM05D001656 ORTHO05D005043 4.7e-244 847.8 556 74.3
CAN.G1801.5 Capsicum annuum HOM05D001656 ORTHO05D005043 3.0e-243 845.1 559 73.7
MD15G1398600 Malus domestica HOM05D001656 ORTHO05D005043 6.8e-243 844.0 558 74.0
BcaC01g01862 Brassica carinata HOM05D001656 ORTHO05D005043 1.5e-242 842.8 556 74.3
Cc10_g08010 Coffea canephora HOM05D001656 ORTHO05D005043 3.4e-242 841.6 564 73.6
BcaB01g00958 Brassica carinata HOM05D001656 ORTHO05D005043 5.8e-242 840.9 557 74.1
HanXRQChr02g0046991 Helianthus annuus HOM05D001656 ORTHO05D005043 7.5e-242 840.5 556 74.6
Nitab4.5_0010814g0010 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.3e-241 839.7 584 71.1
FvH4_5g33570 Fragaria vesca HOM05D001656 ORTHO05D005043 2.9e-241 838.6 559 73.7
Aa31LG3G8940 Aethionema arabicum HOM05D001656 ORTHO05D005043 3.7e-241 838.2 569 72.9
Peaxi162Scf01174g00119 Petunia axillaris HOM05D001656 ORTHO05D005043 6.4e-241 837.4 514 79.0
Solyc04g077030.3 Solanum lycopersicum HOM05D001656 ORTHO05D005043 6.4e-241 837.4 575 72.0
MSTRG.914 Avicennia marina HOM05D001656 ORTHO05D005043 1.8e-240 835.9 557 72.7
BolC3t19406H Brassica oleracea HOM05D001656 ORTHO05D005043 3.2e-240 835.1 562 73.5
A06p20550 Brassica napus HOM05D001656 ORTHO05D005043 4.6e-239 831.2 562 73.1
C03p71250 Brassica napus HOM05D001656 ORTHO05D005043 1.3e-238 829.7 574 71.8
Sopen00g003720 Solanum pennellii HOM05D001656 ORTHO05D005043 6.2e-236 820.8 542 74.0
DCAR_009544 Daucus carota HOM05D001656 ORTHO05D005043 8.0e-236 820.5 557 72.7
Oeu046408.1 Olea europaea HOM05D001656 ORTHO05D005043 8.0e-236 820.5 532 75.8
Zm00001eb109880 Zea mays HOM05D001656 ORTHO05D005043 1.8e-235 819.3 557 70.9
MD08G1210700 Malus domestica HOM05D001656 ORTHO05D005043 6.8e-235 817.4 558 72.0
ATR0315G023 Amborella trichopoda HOM05D001656 ORTHO05D005043 2.0e-234 815.8 549 71.6
Os07g0640200 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 2.6e-234 815.5 559 70.7
Hund05241 Selenicereus undatus HOM05D001656 ORTHO05D005043 3.4e-234 815.1 600 68.8
CDE02G2348 Ceratophyllum demersum HOM05D001656 ORTHO05D005043 4.4e-234 814.7 552 72.1
MELO3C019781.2 Cucumis melo HOM05D001656 ORTHO05D005043 6.4e-233 810.8 564 73.0
RcHm_v2.0_Chr7g0232401 Rosa chinensis HOM05D001656 ORTHO05D005043 8.3e-233 810.4 540 73.0
RcHm_v2.0_Chr7g0232391 Rosa chinensis HOM05D001656 ORTHO05D005043 3.5e-231 805.1 562 71.0
SGA_v2.0_scaffold14G07067 Striga asiatica HOM05D001656 ORTHO05D005043 3.0e-230 802.0 563 70.7
EL10Ac1g02312 Beta vulgaris HOM05D001656 ORTHO05D005043 5.0e-230 801.2 549 70.7
ECA232G0787 Erigeron canadensis HOM05D001656 ORTHO05D005043 6.6e-230 800.8 553 70.3
Hund05240 Selenicereus undatus HOM05D001656 ORTHO05D005043 5.2e-227 791.2 553 71.2
FAN18G4580 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.3e-225 786.6 560 70.7
Nitab4.5_0003791g0040 Nicotiana tabacum HOM05D001656 ORTHO05D005043 1.2e-223 780.0 600 66.7
FAN18G2419 Fragaria x ananassa HOM05D001656 ORTHO05D003489 1.1e-221 773.5 542 71.4
SEGI_21864 Sequoiadendron giganteum HOM05D001656 ORTHO05D005043 8.1e-220 767.3 557 66.4
EL10Ac1g02313 Beta vulgaris HOM05D001656 ORTHO05D005043 1.5e-218 763.1 557 69.1
PSO210G2052 Papaver somniferum HOM05D001656 ORTHO05D005043 2.0e-218 762.7 488 75.6
FAN08G0520 Fragaria x ananassa HOM05D001656 ORTHO05D003489 2.4e-216 755.7 543 70.0
Nn5g30719 Nelumbo nucifera HOM05D001656 ORTHO05D005043 7.8e-215 750.7 442 81.0
Pp3c13_15890 Physcomitrium patens HOM05D001656 ORTHO05D005043 2.8e-212 742.3 556 63.8
Os12g0633000 Oryza sativa ssp. japonica HOM05D001656 ORTHO05D005043 5.2e-211 738.0 562 64.8
FAN08G2664 Fragaria x ananassa HOM05D001656 ORTHO05D005043 1.9e-200 703.0 563 64.3
Mapoly0152s0012 Marchantia polymorpha HOM05D001656 ORTHO05D005043 1.4e-187 660.2 545 59.3
Pp3c4_10480 Physcomitrium patens HOM05D001656 ORTHO05D005043 7.1e-184 647.9 550 57.5
Sc26g0004310 Simmondsia chinensis HOM05D001656 ORTHO05D005043 2.1e-183 646.4 403 77.7
Psat5g091440 Pisum sativum HOM05D001656 ORTHO05D005043 4.6e-183 645.2 391 79.3
MBI16_g05037_MAGBIO Magnolia biondii HOM05D001656 ORTHO05D005043 1.0e-182 644.0 431 74.0
SMO339G0045 Selaginella moellendorffii HOM05D001656 ORTHO05D005043 1.2e-170 604.0 569 56.1
Sc08g0003410 Simmondsia chinensis HOM05D001656 ORTHO05D005043 7.7e-170 601.3 391 74.9
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 7.9e-167 591.3 551 54.6
Pp3c4_10497 Physcomitrium patens HOM05D001656 ORTHO05D005043 2.1e-159 566.6 486 57.0
Dinv44906 Davidia involucrata HOM05D001656 ORTHO05D005043 6.7e-158 561.6 322 83.2
FAN04G1176 Fragaria x ananassa HOM05D001656 ORTHO05D005043 3.8e-137 492.7 336 71.1
Oeu034830.1 Olea europaea HOM05D001656 ORTHO05D005043 4.2e-136 489.2 308 78.6
Hma1.2p1_1281F.1_g272610 Hydrangea macrophylla HOM05D001656 ORTHO05D005043 5.5e-136 488.8 290 79.3
CARHR293240 Cardamine hirsuta HOM05D001656 ORTHO05D005043 1.8e-131 473.8 320 70.9
unitig_736.g22951 Utricularia gibba HOM05D001656 ORTHO05D005043 1.4e-123 447.6 321 66.7
AUR62034953 Chenopodium quinoa HOM05D001656 ORTHO05D005043 5.0e-121 439.1 292 72.9
Oeu035949.1 Olea europaea HOM05D001656 ORTHO05D005043 5.1e-113 412.5 268 74.3
HPP92_028451 Vanilla planifolia HOM05D001656 ORTHO05D005043 4.7e-111 406.0 273 72.5
SpUn0078_0010 Schrenkiella parvula HOM05D001656 ORTHO05D005043 1.0e-105 388.3 246 77.2
Oeu011631.2 Olea europaea HOM05D001656 ORTHO05D005043 3.4e-101 373.2 238 77.7
HPP92_019867 Vanilla planifolia HOM05D001656 ORTHO05D005043 2.3e-97 360.5 233 76.0
Glyma.06G090401 Glycine max HOM05D001656 ORTHO05D005043 2.8e-87 327.0 240 69.2
CBR_g40751 Chara braunii HOM05D001656 ORTHO05D005043 3.5e-82 310.1 263 59.7
Gorai.010G169800 Gossypium raimondii HOM05D001656 ORTHO05D005043 6.3e-55 219.5 138 77.5
Gohir.D06G145701 Gossypium hirsutum HOM05D001656 ORTHO05D005043 8.2e-55 219.2 137 76.6
Gorai.013G041400 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.1e-54 218.8 139 76.3
Gohir.D13G037000 Gossypium hirsutum HOM05D001656 ORTHO05D005043 6.9e-54 216.1 139 75.5
Atru.chr7.541 Acer truncatum HOM05D001656 ORTHO05D005043 6.5e-52 209.5 180 60.6
unitig_736.g22950 Utricularia gibba HOM05D001656 ORTHO05D005043 9.4e-51 205.7 140 72.1
Gorai.010G172000 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.5e-48 198.4 128 75.8
Dinv26408 Davidia involucrata HOM05D001656 ORTHO05D005043 2.4e-38 164.5 98 78.6
Dinv14696 Davidia involucrata HOM05D001656 ORTHO05D005043 3.8e-36 157.1 115 65.2
Atru.chr13.2595 Acer truncatum HOM05D001656 ORTHO05D005043 1.5e-27 128.6 107 63.6
Cc01_g04230 Coffea canephora HOM05D001656 ORTHO05D005043 3.7e-23 114.0 63 81.0
Cc04_g15120 Coffea canephora HOM05D001656 ORTHO05D005043 1.4e-22 112.1 63 79.4
Cc11_g07750 Coffea canephora HOM05D001656 ORTHO05D005043 7.0e-22 109.8 71 69.0
Cc02_g27750 Coffea canephora HOM05D001656 ORTHO05D005043 3.5e-21 107.5 63 76.2
MCO10G102 Micromonas commoda HOM05D001656 ORTHO05D014814 2.9e-20 104.4 434 26.0
Gorai.004G152700 Gossypium raimondii HOM05D001656 ORTHO05D005043 1.1e-19 102.4 63 74.6
Cre07.g321100 Chlamydomonas reinhardtii HOM05D001656 ORTHO05D014814 1.9e-19 101.7 493 25.2
Gohir.D08G147150 Gossypium hirsutum HOM05D001656 ORTHO05D005043 2.5e-19 101.3 63 74.6
HanXRQChr08g0210401 Helianthus annuus HOM05D001656 ORTHO05D005043 1.6e-18 98.6 56 75.0
CBR_g50937 Chara braunii HOM05D001656 ORTHO05D005043 1.2e-16 92.4 245 27.8
ECA247G1681 Erigeron canadensis HOM05D000257 ORTHO05D008527 1.7e-15 88.6 60 68.3
Cc08_g09760 Coffea canephora HOM05D001656 ORTHO05D005043 1.1e-14 85.9 54 74.1
PRCOL_00006907 Prasinoderma coloniale HOM05D013921 ORTHO05D014814 8.6e-12 76.3 516 23.6
RcHm_v2.0_Chr2g0168121 Rosa chinensis HOM05D004344 ORTHO05D021344 2.1e-10 71.6 54 55.6
FvH4_5g33600 Fragaria vesca HOM05D001656 ORTHO05D005043 8.3e-07 59.7 55 52.7
FAN18G3130 Fragaria x ananassa HOM05D001656 ORTHO05D005043 8.3e-07 59.7 55 52.7
Thecc.03G047200 Theobroma cacao HOM05D000075 ORTHO05D408647 1.9e-06 58.5 64 57.8


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