Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 1.3e-82 309.7 153 100.0
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 5.9e-32 141.4 127 61.4
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 9.5e-30 134.0 124 56.5
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 5.2e-28 128.3 134 56.0
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 1.5e-27 126.7 139 53.2
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 4.4e-27 125.2 112 63.4
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 2.2e-26 122.9 93 63.4
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 1.4e-25 120.2 122 61.5
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 5.4e-25 118.2 109 60.6
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 7.0e-25 117.9 131 53.4
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 1.6e-24 116.7 100 58.0
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 1.6e-24 116.7 106 59.4
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 4.6e-24 115.2 122 54.9
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 6.0e-24 114.8 114 57.0
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 7.8e-24 114.4 126 55.6
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.0e-23 114.0 106 52.8
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 1.0e-23 114.0 112 58.9
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.0e-23 114.0 98 58.2
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 1.3e-23 113.6 99 62.6
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 1.7e-23 113.2 110 57.3
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 1.7e-23 113.2 116 55.2
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 1.7e-23 113.2 126 55.6
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 2.3e-23 112.8 98 59.2
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 2.3e-23 112.8 105 58.1
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 3.0e-23 112.5 110 55.5
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 3.0e-23 112.5 110 57.3
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 3.0e-23 112.5 98 64.3
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 3.9e-23 112.1 107 57.9
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 5.0e-23 111.7 110 55.5
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 5.0e-23 111.7 103 58.3
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 6.6e-23 111.3 99 60.6
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 6.6e-23 111.3 99 60.6
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 6.6e-23 111.3 112 56.2
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 1.1e-22 110.5 104 55.8
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 1.1e-22 110.5 96 60.4
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 1.1e-22 110.5 122 56.6
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.1e-22 110.5 122 50.8
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.5e-22 110.2 114 54.4
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 2.5e-22 109.4 118 54.2
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.5e-22 109.4 82 67.1
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 3.3e-22 109.0 117 54.7
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 5.6e-22 108.2 119 54.6
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 5.6e-22 108.2 122 50.8
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 7.3e-22 107.8 83 68.7
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 7.3e-22 107.8 83 66.3
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 9.5e-22 107.5 93 58.1
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 9.5e-22 107.5 111 54.1
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 1.2e-21 107.1 106 56.6
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.2e-21 107.1 117 53.8
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 1.2e-21 107.1 123 54.5
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.2e-21 107.1 100 53.0
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.2e-21 107.1 118 53.4
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 1.6e-21 106.7 92 59.8
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 2.1e-21 106.3 116 55.2
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 2.8e-21 105.9 113 54.0
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 2.8e-21 105.9 96 59.4
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 2.8e-21 105.9 123 48.0
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 2.8e-21 105.9 110 58.2
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 3.6e-21 105.5 113 53.1
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 8.1e-21 104.4 113 53.1
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.1e-20 104.0 114 56.1
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 1.8e-20 103.2 113 52.2
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.8e-20 103.2 114 53.5
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 2.3e-20 102.8 104 53.8
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 4.0e-20 102.1 112 55.4
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 4.0e-20 102.1 112 55.4
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 4.0e-20 102.1 112 55.4
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 5.2e-20 101.7 128 49.2
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 6.8e-20 101.3 111 52.3
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 2.0e-19 99.8 112 51.8
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 2.0e-19 99.8 112 52.7
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 2.6e-19 99.4 98 55.1
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 2.6e-19 99.4 74 70.3
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 7.5e-19 97.8 57 78.9
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.3e-18 97.1 106 50.0
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 1.3e-18 97.1 94 53.2
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 1.7e-18 96.7 106 48.1
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 2.2e-18 96.3 56 82.1
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 3.7e-18 95.5 92 53.3
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 3.7e-18 95.5 114 51.8
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 1.4e-17 93.6 122 46.7
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 1.9e-17 93.2 94 52.1
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 2.4e-17 92.8 47 85.1
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 2.4e-17 92.8 108 48.1
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 2.4e-17 92.8 84 59.5
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 3.2e-17 92.4 119 44.5
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 4.1e-17 92.0 111 47.7
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 5.4e-17 91.7 117 47.9
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 5.4e-17 91.7 110 48.2
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 7.1e-17 91.3 121 47.1
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 7.1e-17 91.3 121 47.1
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 7.1e-17 91.3 96 51.0
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 1.6e-16 90.1 94 54.3
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 2.1e-16 89.7 66 62.1
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 2.7e-16 89.4 120 49.2
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.7e-16 89.4 54 72.2
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 7.8e-16 87.8 109 54.1
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 7.8e-16 87.8 109 54.1
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 1.3e-15 87.0 61 67.2
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 1.7e-15 86.7 61 65.6
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 3.0e-15 85.9 98 55.1
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 5.1e-15 85.1 61 67.2
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 5.1e-15 85.1 112 50.0
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 1.1e-14 84.0 95 48.4
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 1.1e-14 84.0 48 83.3
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 1.6e-13 80.1 58 69.0
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 2.1e-13 79.7 58 69.0
A03p08530 Brassica napus HOM05D006906 ORTHO05D008578 4.1e-09 65.5 115 43.5
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 5.4e-09 65.1 45 64.4
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 7.1e-09 64.7 78 50.0
BcaB05g23287 Brassica carinata HOM05D006906 ORTHO05D008578 1.6e-08 63.5 106 43.4
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 2.7e-08 62.8 46 65.2
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 8.6e-07 57.8 50 62.0
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 1.1e-06 57.4 57 54.4


User provided reference genes

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