Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 4.0e-134 481.5 251 100.0
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 3.9e-89 332.0 219 80.8
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 8.7e-89 330.9 219 77.6
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 2.6e-85 319.3 250 68.4
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 1.3e-84 317.0 219 75.3
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.9e-84 315.8 219 75.8
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 3.2e-83 312.4 219 75.3
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 4.2e-83 312.0 216 75.5
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.2e-82 310.5 219 74.9
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 2.1e-82 309.7 218 75.2
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 6.0e-82 308.1 231 71.4
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 1.8e-81 306.6 218 72.9
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 1.8e-81 306.6 216 75.5
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 3.9e-81 305.4 218 73.9
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 4.3e-80 302.0 217 72.4
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 5.6e-80 301.6 218 71.1
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 7.4e-80 301.2 216 74.1
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 1.6e-79 300.1 218 70.6
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 1.6e-79 300.1 206 75.2
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 2.8e-79 299.3 222 71.6
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 3.7e-79 298.9 220 72.3
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 4.8e-79 298.5 220 71.8
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 6.2e-79 298.1 220 72.3
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 1.1e-78 297.4 222 73.0
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 1.1e-78 297.4 226 69.9
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 1.1e-78 297.4 219 72.1
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 1.4e-78 297.0 213 73.2
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 2.4e-78 296.2 218 72.5
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.4e-78 296.2 218 72.9
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 2.4e-78 296.2 218 71.6
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 3.1e-78 295.8 246 66.7
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 3.1e-78 295.8 218 70.6
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 4.0e-78 295.4 194 77.3
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 6.9e-78 294.7 222 72.1
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 1.5e-77 293.5 222 70.7
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 2.0e-77 293.1 214 71.5
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 2.6e-77 292.7 213 72.8
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 3.4e-77 292.4 222 69.8
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 4.5e-77 292.0 216 71.8
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 5.8e-77 291.6 218 70.6
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 5.8e-77 291.6 218 71.1
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 5.8e-77 291.6 221 70.6
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 1.3e-76 290.4 221 70.6
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 1.7e-76 290.0 218 71.6
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 1.7e-76 290.0 218 71.6
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 2.9e-76 289.3 218 72.0
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 3.8e-76 288.9 218 70.2
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 4.9e-76 288.5 226 69.0
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 6.5e-76 288.1 218 69.7
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 6.5e-76 288.1 215 70.7
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 8.4e-76 287.7 213 70.9
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 8.4e-76 287.7 218 68.8
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 8.4e-76 287.7 218 70.6
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 1.9e-75 286.6 215 71.2
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 2.5e-75 286.2 215 69.8
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 2.5e-75 286.2 270 59.3
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 2.3e-73 279.6 222 68.0
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 3.9e-73 278.9 191 75.4
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.9e-72 276.6 219 67.1
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.9e-72 276.6 218 68.3
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.5e-72 276.2 220 69.1
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 9.6e-72 274.2 223 66.8
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 9.6e-72 274.2 214 68.7
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 2.1e-71 273.1 167 83.8
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.8e-70 270.0 218 66.1
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 1.8e-70 270.0 167 81.4
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 2.6e-69 266.2 220 67.7
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 3.4e-69 265.8 216 63.9
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 7.6e-69 264.6 217 63.6
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 3.8e-68 262.3 219 67.6
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 5.0e-68 261.9 167 79.0
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 1.1e-67 260.8 218 62.8
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 4.2e-67 258.8 218 66.1
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 5.5e-67 258.5 167 74.9
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 7.2e-67 258.1 218 62.4
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 1.2e-66 257.3 183 73.2
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 3.0e-65 252.7 242 57.9
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 6.7e-65 251.5 193 67.9
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 2.5e-64 249.6 183 69.9
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 3.3e-64 249.2 220 61.8
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 3.7e-63 245.7 155 81.3
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 6.9e-62 241.5 172 69.2
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 7.9e-58 228.0 225 56.4
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 3.0e-57 226.1 138 79.0
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 2.5e-56 223.0 156 77.6
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 1.3e-55 220.7 229 55.0
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 3.4e-53 212.6 218 56.0
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 3.0e-49 199.5 140 69.3
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.1e-48 197.6 155 72.3
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 2.5e-43 179.9 136 66.9
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 5.5e-43 178.7 147 70.7
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 7.2e-43 178.3 147 70.1
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 9.4e-43 177.9 218 50.5
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 2.5e-27 126.7 95 71.6
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.5e-24 117.5 80 77.5
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 1.5e-24 117.5 80 77.5
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 5.9e-21 105.5 220 37.3
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 5.6e-19 99.0 59 79.7
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 2.1e-18 97.1 72 70.8
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 2.0e-16 90.5 76 51.3
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 3.5e-13 79.7 196 34.2
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.3e-12 77.8 78 55.1
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 5.6e-11 72.4 161 35.4
Aa31LG6G10720 Aethionema arabicum HOM05D004815 ORTHO05D005742 1.1e-06 58.2 42 69.0


User provided reference genes

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