Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 1.9e-272 941.8 447 100.0
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.5e-187 659.8 441 71.7
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 1.8e-182 642.9 441 70.7
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.5e-163 580.1 461 63.3
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 4.4e-160 568.5 460 61.3
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 1.3e-159 567.0 460 62.0
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.2e-159 566.2 460 61.1
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.1e-158 562.0 459 60.6
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 1.2e-157 560.5 462 59.5
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.7e-157 559.3 461 60.5
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 6.0e-157 558.1 461 60.3
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.4e-153 547.0 465 59.8
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 3.1e-153 545.8 462 57.8
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 4.0e-153 545.4 456 58.8
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 5.2e-153 545.0 458 60.3
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.5e-152 541.2 463 59.8
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 9.8e-152 540.8 462 57.4
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 1.3e-151 540.4 458 58.7
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 2.9e-151 539.3 457 59.1
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 2.7e-149 532.7 459 56.4
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 3.5e-149 532.3 458 58.1
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 7.8e-149 531.2 453 58.3
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 1.0e-148 530.8 459 56.2
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 2.3e-148 529.6 457 58.9
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 1.1e-147 527.3 469 55.9
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 3.6e-146 522.3 455 57.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 6.2e-146 521.5 469 56.5
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 6.8e-145 518.1 459 57.5
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 2.6e-144 516.2 447 59.3
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 3.4e-144 515.8 463 56.2
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 9.9e-144 514.2 461 55.3
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.6e-141 506.9 459 56.6
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 3.5e-141 505.8 453 55.6
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 7.8e-141 504.6 444 56.3
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 2.3e-140 503.1 452 56.0
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 2.3e-140 503.1 444 57.2
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 2.3e-140 503.1 453 55.4
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 3.9e-140 502.3 445 56.0
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 5.1e-140 501.9 463 55.3
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.6e-140 501.1 452 55.8
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.1e-139 500.7 448 56.7
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.5e-139 499.6 452 55.8
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 9.5e-139 497.7 447 55.5
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 9.5e-139 497.7 452 56.4
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 2.1e-138 496.5 481 53.0
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.6e-138 495.7 450 56.0
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.1e-138 494.6 452 54.9
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 6.8e-137 491.5 447 54.8
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 1.2e-136 490.7 439 53.8
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 4.4e-136 488.8 453 55.8
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.6e-136 488.0 452 54.2
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.3e-135 487.3 453 53.9
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 3.8e-135 485.7 461 55.5
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 3.8e-135 485.7 455 53.2
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 4.9e-135 485.3 446 54.7
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 6.4e-135 485.0 467 55.2
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.4e-134 481.9 459 55.1
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 9.2e-134 481.1 445 55.3
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 1.2e-133 480.7 472 53.0
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.2e-133 480.7 464 55.2
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 6.6e-132 474.9 459 53.8
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 2.5e-131 473.0 464 54.5
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.6e-130 470.3 452 52.9
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 3.6e-130 469.2 447 54.6
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 4.0e-129 465.7 454 52.2
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 9.0e-129 464.5 447 54.1
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 3.4e-128 462.6 451 52.1
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 9.9e-128 461.1 454 53.1
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 3.3e-123 446.0 438 53.7
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 4.3e-123 445.7 455 51.4
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 9.0e-121 438.0 454 51.5
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 3.8e-119 432.6 451 50.1
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 3.2e-118 429.5 438 53.0
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.8e-116 423.7 440 53.2
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.3e-116 423.3 439 52.8
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.9e-115 420.2 464 49.6
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 4.3e-115 419.1 433 51.0
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.8e-114 416.4 435 49.7
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 1.7e-111 407.1 462 44.8
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 2.9e-111 406.4 413 52.5
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 6.4e-111 405.2 451 49.2
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 8.4e-111 404.8 440 50.7
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.9e-110 403.7 436 50.7
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 7.1e-110 401.7 439 50.6
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 7.1e-110 401.7 439 50.6
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 2.3e-108 396.7 440 50.5
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 5.1e-108 395.6 437 49.0
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 2.5e-107 393.3 492 45.5
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 7.4e-107 391.7 441 50.3
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 2.1e-106 390.2 438 49.5
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.8e-106 389.8 445 47.0
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 9.0e-105 384.8 440 49.5
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.7e-103 380.6 437 49.0
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 9.7e-99 364.8 447 45.9
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 2.8e-98 363.2 443 42.9
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 1.2e-96 357.8 438 47.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 1.2e-93 347.8 319 58.3
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 7.9e-93 345.1 300 57.3
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 9.1e-81 305.1 349 47.9
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.6e-77 294.3 312 53.2
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.3e-74 284.6 271 56.5
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 1.8e-68 264.2 493 34.1
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.8e-68 264.2 281 49.8
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 6.3e-66 255.8 239 53.1
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 6.3e-58 229.2 332 42.2
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.0e-52 211.8 520 29.2
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 1.7e-47 194.5 227 47.1
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.9e-46 191.0 438 31.5
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 9.5e-38 162.2 466 26.2
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 8.1e-37 159.1 150 52.7
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 2.1e-32 144.4 130 50.8
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 4.6e-32 143.3 191 44.5
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 3.3e-30 137.1 555 23.6
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 1.6e-29 134.8 119 54.6
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.1e-28 132.1 119 52.1
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 6.8e-28 129.4 104 55.8
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.2e-27 128.6 103 56.3
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 1.8e-20 104.8 227 32.6
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 3.1e-20 104.0 91 52.7
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 5.8e-19 99.8 95 53.7
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 9.9e-19 99.0 160 37.5
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.4e-18 95.9 65 61.5
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 5.4e-17 93.2 88 59.1
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 2.1e-16 91.3 84 60.7


User provided reference genes

Program Settings