Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G039100 Manihot esculenta HOM05D006480 ORTHO05D008072 6.1e-70 267.3 130 100.0
Manes.05G185600 Manihot esculenta HOM05D006480 ORTHO05D008072 7.0e-66 253.8 130 92.3
Potri.002G112700 Populus trichocarpa HOM05D006480 ORTHO05D008072 2.0e-65 252.3 128 94.5
Hma1.2p1_1068F.1_g253990 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 6.5e-64 247.3 130 90.0
Actinidia10245 Actinidia chinensis HOM05D006480 ORTHO05D008072 1.1e-63 246.5 130 90.0
CiPaw.15G154000 Carya illinoinensis HOM05D006480 ORTHO05D008072 1.9e-63 245.7 130 90.0
Duzib116G0020 Durio zibethinus HOM05D006480 ORTHO05D008072 3.2e-63 245.0 130 88.5
Duzib116G0295 Durio zibethinus HOM05D006480 ORTHO05D008072 3.2e-63 245.0 130 88.5
Eucgr.F02200 Eucalyptus grandis HOM05D006480 ORTHO05D008072 4.2e-63 244.6 130 90.8
Ciclev10002836m.g Citrus clementina HOM05D006480 ORTHO05D008072 5.5e-63 244.2 130 89.2
PGR031G1285 Punica granatum HOM05D006480 ORTHO05D008072 5.5e-63 244.2 130 87.7
Thecc.08G081100 Theobroma cacao HOM05D006480 ORTHO05D008072 9.4e-63 243.4 130 87.7
TWI56G0589 Tripterygium wilfordii HOM05D006480 ORTHO05D008072 9.4e-63 243.4 130 87.7
Gohir.D06G025000 Gossypium hirsutum HOM05D006480 ORTHO05D008072 1.6e-62 242.7 128 87.5
Cpa.g.sc160.14 Carica papaya HOM05D006480 ORTHO05D008072 2.1e-62 242.3 130 87.7
Gohir.A05G213700 Gossypium hirsutum HOM05D006480 ORTHO05D008072 2.1e-62 242.3 130 86.9
Duzib093G0124 Durio zibethinus HOM05D006480 ORTHO05D008072 2.7e-62 241.9 130 86.2
MSTRG.25010 Avicennia marina HOM05D006480 ORTHO05D008072 4.7e-62 241.1 130 86.9
Cc10_g07920 Coffea canephora HOM05D006480 ORTHO05D008072 4.7e-62 241.1 130 88.5
Lalb_Chr11g0064651 Lupinus albus HOM05D006480 ORTHO05D008072 4.7e-62 241.1 130 87.7
CsaV3_3G048380 Cucumis sativus L. HOM05D006480 ORTHO05D008072 1.4e-61 239.6 130 86.2
Glyma.06G089400 Glycine max HOM05D006480 ORTHO05D008072 1.4e-61 239.6 130 86.9
Psat5g019760 Pisum sativum HOM05D006480 ORTHO05D008072 1.8e-61 239.2 129 86.0
Dinv01222 Davidia involucrata HOM05D006480 ORTHO05D008072 2.3e-61 238.8 127 88.2
Psat0s2525g0120 Pisum sativum HOM05D006480 ORTHO05D008072 2.3e-61 238.8 129 86.0
Glyma.04G087700 Glycine max HOM05D006480 ORTHO05D008072 8.8e-61 236.9 130 85.4
Gohir.D05G217100 Gossypium hirsutum HOM05D006480 ORTHO05D008072 8.8e-61 236.9 127 86.6
GSVIVG01009268001 Vitis vinifera HOM05D006480 ORTHO05D008072 8.8e-61 236.9 132 87.9
Nn5g30706 Nelumbo nucifera HOM05D006480 ORTHO05D008072 1.2e-60 236.5 126 87.3
Dinv16062 Davidia involucrata HOM05D006480 ORTHO05D008072 1.5e-60 236.1 122 91.0
SalBow7G2271 Salvia bowleyana HOM05D006480 ORTHO05D008072 2.0e-60 235.7 130 85.4
Sed0011969 Sechium edule HOM05D006480 ORTHO05D008072 2.0e-60 235.7 130 84.6
Lj1g0003564 Lotus japonicus HOM05D006480 ORTHO05D008072 4.4e-60 234.6 129 86.8
Medtr3g110600 Medicago truncatula HOM05D006480 ORTHO05D008072 4.4e-60 234.6 129 86.0
Phvul.009G113300 Phaseolus vulgaris HOM05D006480 ORTHO05D008072 4.4e-60 234.6 130 83.8
Aqoxy6G01530 Aquilegia oxysepala HOM05D006480 ORTHO05D008072 7.5e-60 233.8 122 90.2
Lsat_1_v5_gn_5_111841 Lactuca sativa HOM05D006480 ORTHO05D008072 9.8e-60 233.4 122 90.2
Sc15g0005270 Simmondsia chinensis HOM05D006480 ORTHO05D008072 9.8e-60 233.4 130 84.6
Ah.05g166870 Amaranthus hybridus HOM05D006480 ORTHO05D008072 2.2e-59 232.3 127 85.8
Rhsim07G0215700 Rhododendron simsii HOM05D006480 ORTHO05D008072 2.2e-59 232.3 140 81.4
Ca_30083_v3 Cicer arietinum L. HOM05D006480 ORTHO05D008072 2.8e-59 231.9 129 84.5
CAN.G416.48 Capsicum annuum HOM05D006480 ORTHO05D008072 6.3e-59 230.7 127 86.6
Migut.N02813 Erythranthe guttata HOM05D006480 ORTHO05D008072 6.3e-59 230.7 130 83.8
Nitab4.5_0001614g0080 Nicotiana tabacum HOM05D006480 ORTHO05D008072 6.3e-59 230.7 127 85.8
PGSC0003DMG400004956 Solanum tuberosum HOM05D006480 ORTHO05D008072 6.3e-59 230.7 127 85.0
TPR.G12422 Trifolium pratense HOM05D006480 ORTHO05D008072 8.3e-59 230.3 129 83.7
Solyc04g077150.3 Solanum lycopersicum HOM05D006480 ORTHO05D008072 1.1e-58 229.9 127 85.0
Sopen04g030760 Solanum pennellii HOM05D006480 ORTHO05D008072 1.1e-58 229.9 127 85.0
FvH4_2g03000 Fragaria vesca HOM05D006480 ORTHO05D008072 2.4e-58 228.8 122 87.7
FAN15G0464 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.4e-58 228.8 122 87.7
SGA_v2.0_scaffold152G36869 Striga asiatica HOM05D006480 ORTHO05D008072 2.4e-58 228.8 127 85.0
MBI16_g24165_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 5.4e-58 227.6 121 86.0
Hma1.2p1_2654F.1_g326220 Hydrangea macrophylla HOM05D006480 ORTHO05D008072 9.1e-58 226.9 126 84.1
MD05G1108500 Malus domestica HOM05D006480 ORTHO05D008072 9.1e-58 226.9 122 85.2
Prupe.8G152200 Prunus persica HOM05D006480 ORTHO05D008072 1.2e-57 226.5 122 86.1
AL1G20730 Arabidopsis lyrata HOM05D006480 ORTHO05D008072 1.6e-57 226.1 127 83.5
Os12g0633200 Oryza sativa ssp. japonica HOM05D006480 ORTHO05D008072 1.6e-57 226.1 129 82.9
Peaxi162Scf00628g00517 Petunia axillaris HOM05D006480 ORTHO05D008072 1.6e-57 226.1 127 83.5
AT1G10030 Arabidopsis thaliana HOM05D006480 ORTHO05D008072 2.0e-57 225.7 130 82.3
RcHm_v2.0_Chr6g0247791 Rosa chinensis HOM05D006480 ORTHO05D008072 2.7e-57 225.3 122 86.1
HPP92_019513 Vanilla planifolia HOM05D006480 ORTHO05D008072 2.7e-57 225.3 122 87.7
FAN20G1015 Fragaria x ananassa HOM05D006480 ORTHO05D008072 5.9e-57 224.2 122 86.1
MBI16_g31814_MAGBIO Magnolia biondii HOM05D006480 ORTHO05D008072 5.9e-57 224.2 121 85.1
THA.LOC104816778 Tarenaya hassleriana HOM05D006480 ORTHO05D008072 5.9e-57 224.2 130 80.8
HanXRQChr10g0293651 Helianthus annuus HOM05D006480 ORTHO05D008072 7.7e-57 223.8 122 87.7
arahy.Tifrunner.gnm1.ann1.2A26X2 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.7e-56 222.6 130 78.5
ECA234G4602 Erigeron canadensis HOM05D006480 ORTHO05D008072 1.7e-56 222.6 122 86.9
CARHR010140 Cardamine hirsuta HOM05D006480 ORTHO05D008072 2.3e-56 222.2 130 80.0
Gorai.009G223900 Gossypium raimondii HOM05D006480 ORTHO05D008072 2.9e-56 221.9 119 86.6
ClCG11G014970 Citrullus lanatus HOM05D006480 ORTHO05D008072 5.0e-56 221.1 166 67.5
Zm00001eb282130 Zea mays HOM05D006480 ORTHO05D008072 1.5e-55 219.5 123 82.1
Carub.0001s0945 Capsella rubella HOM05D006480 ORTHO05D008072 1.9e-55 219.2 130 80.8
Zm00001eb032930 Zea mays HOM05D006480 ORTHO05D008072 2.5e-55 218.8 119 84.9
PSO675G8575 Papaver somniferum HOM05D006480 ORTHO05D008072 3.3e-55 218.4 122 83.6
PSO541G2150 Papaver somniferum HOM05D006480 ORTHO05D008072 5.5e-55 217.6 122 83.6
EL10Ac1g02330 Beta vulgaris HOM05D006480 ORTHO05D008072 7.2e-55 217.2 127 78.7
Thhalv10009099m.g Eutrema salsugineum HOM05D006480 ORTHO05D008072 9.5e-55 216.9 130 80.0
BcaC05g24816 Brassica carinata HOM05D006480 ORTHO05D008072 1.2e-54 216.5 130 79.2
A06p06730 Brassica napus HOM05D006480 ORTHO05D008072 1.2e-54 216.5 130 79.2
BcaC05g24814 Brassica carinata HOM05D006480 ORTHO05D008072 4.7e-54 214.5 130 78.5
C05p08210 Brassica napus HOM05D006480 ORTHO05D008072 4.7e-54 214.5 130 78.5
Sp1g08680 Schrenkiella parvula HOM05D006480 ORTHO05D008072 8.0e-54 213.8 130 77.7
CANSAT25G0792 Cannabis sativa HOM05D006480 ORTHO05D008072 1.0e-53 213.4 122 82.0
BcaC07g38564 Brassica carinata HOM05D006480 ORTHO05D008072 1.4e-53 213.0 127 79.5
vmacro21395 Vaccinium macrocarpon HOM05D006480 ORTHO05D008072 6.8e-53 210.7 108 93.5
A08p34230 Brassica napus HOM05D006480 ORTHO05D008072 2.0e-52 209.1 127 78.7
BolC5t29573H Brassica oleracea HOM05D006480 ORTHO05D008072 2.0e-52 209.1 133 76.7
BraA08t35335Z Brassica rapa HOM05D006480 ORTHO05D008072 2.0e-52 209.1 127 78.7
Oeu000749.3 Olea europaea HOM05D006480 ORTHO05D008072 2.0e-52 209.1 111 90.1
Sabra02G0089000 Salix brachista HOM05D006480 ORTHO05D008072 2.6e-52 208.8 112 90.2
BolC8t48966H Brassica oleracea HOM05D006480 ORTHO05D008072 1.3e-51 206.5 129 77.5
Hund05252 Selenicereus undatus HOM05D006480 ORTHO05D008072 2.2e-51 205.7 111 89.2
Atru.chr13.908 Acer truncatum HOM05D006480 ORTHO05D008072 4.9e-51 204.5 108 91.7
Gorai.010G029400 Gossypium raimondii HOM05D006480 ORTHO05D008072 4.9e-51 204.5 108 89.8
FAN24G1468 Fragaria x ananassa HOM05D006480 ORTHO05D008072 1.1e-50 203.4 131 77.1
QL12p040680 Quercus lobata HOM05D006480 ORTHO05D008072 1.1e-50 203.4 112 88.4
MELO3C003481.2 Cucumis melo HOM05D006480 ORTHO05D008072 1.8e-50 202.6 108 89.8
Gohir.A06G027600 Gossypium hirsutum HOM05D006480 ORTHO05D008072 3.1e-50 201.8 107 89.7
FAN27G3220 Fragaria x ananassa HOM05D006480 ORTHO05D008072 2.0e-49 199.1 108 88.0
MD10G1112500 Malus domestica HOM05D006480 ORTHO05D008072 2.0e-49 199.1 125 74.4
C08p13360 Brassica napus HOM05D006480 ORTHO05D008072 5.9e-49 197.6 128 75.0
BraA06t23887Z Brassica rapa HOM05D006480 ORTHO05D008072 7.8e-49 197.2 165 61.8
VMungo1309G2678 Vigna mungo HOM05D006480 ORTHO05D008072 7.8e-49 197.2 142 69.7
Lj5A222T80 Lonicera japonica HOM05D006480 ORTHO05D008072 1.1e-47 193.4 109 87.2
arahy.Tifrunner.gnm1.ann1.27XHB7 Arachis hypogaea HOM05D006480 ORTHO05D008072 1.6e-46 189.5 119 74.8
Aa31LG1G4870 Aethionema arabicum HOM05D006480 ORTHO05D008072 1.8e-45 186.0 107 84.1
Mapoly0019s0092 Marchantia polymorpha HOM05D006480 ORTHO05D008072 3.1e-45 185.3 131 67.9
Dinv09524 Davidia involucrata HOM05D006480 ORTHO05D008072 1.5e-44 183.0 99 89.9
Thecc.02G032200 Theobroma cacao HOM05D006480 ORTHO05D008072 6.4e-43 177.6 121 68.6
SMO112G0018 Selaginella moellendorffii HOM05D006480 ORTHO05D008072 9.2e-42 173.7 110 74.5
Nitab4.5_0002415g0030 Nicotiana tabacum HOM05D006480 ORTHO05D008072 7.8e-41 170.6 92 88.0
CARHR010030 Cardamine hirsuta HOM05D006480 ORTHO05D008072 2.6e-36 155.6 92 76.1
AagrBONN_evm.TU.Sc2ySwM_228.4946 Anthoceros agrestis HOM05D006480 ORTHO05D008072 6.4e-35 151.0 129 55.0
Zm00001eb116080 Zea mays HOM05D006480 ORTHO05D008072 9.5e-31 137.1 120 56.7
Zm00001eb116100 Zea mays HOM05D006480 ORTHO05D008072 9.5e-31 137.1 120 56.7
Zm00001eb129300 Zea mays HOM05D006480 ORTHO05D008072 3.6e-30 135.2 120 54.2
Zm00001eb129140 Zea mays HOM05D006480 ORTHO05D008072 5.2e-29 131.3 120 54.2
Zm00001eb409710 Zea mays HOM05D006480 ORTHO05D008072 1.3e-27 126.7 119 51.3
Duzib041G0452 Durio zibethinus HOM05D006480 ORTHO05D008072 7.1e-26 120.9 75 76.0
Zm00001eb129210 Zea mays HOM05D006480 ORTHO05D008072 1.0e-24 117.1 108 53.7
Pp3c19_15780 Physcomitrium patens HOM05D006480 ORTHO05D008072 2.3e-24 115.9 87 59.8
CBR_g29820 Chara braunii HOM05D006480 ORTHO05D008072 1.9e-23 112.8 119 41.2
CBR_g8921 Chara braunii HOM05D001598 ORTHO05D002757 4.3e-23 111.7 119 42.9


User provided reference genes

Program Settings