Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 4.5e-101 371.3 194 100.0
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 2.0e-24 116.7 109 60.6
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 5.8e-24 115.2 109 58.7
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 9.9e-24 114.4 109 58.7
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 2.9e-23 112.8 109 57.8
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 4.9e-23 112.1 109 58.7
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 8.4e-23 111.3 109 59.6
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 4.1e-22 109.0 114 50.9
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 2.1e-21 106.7 111 54.1
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 2.7e-21 106.3 112 50.0
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.5e-21 105.9 108 56.5
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 4.6e-21 105.5 109 56.0
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 4.6e-21 105.5 109 55.0
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 6.0e-21 105.1 109 55.0
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 6.0e-21 105.1 112 50.9
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 6.0e-21 105.1 109 53.2
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 7.8e-21 104.8 112 50.0
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 1.3e-20 104.0 109 52.3
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.7e-20 103.6 112 50.9
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 1.7e-20 103.6 109 53.2
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 3.0e-20 102.8 112 50.9
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 3.0e-20 102.8 109 55.0
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 3.9e-20 102.4 109 53.2
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 3.9e-20 102.4 109 52.3
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 5.1e-20 102.1 118 50.8
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 5.1e-20 102.1 109 52.3
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 1.1e-19 100.9 110 55.5
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 1.1e-19 100.9 109 51.4
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 1.9e-19 100.1 109 51.4
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 1.9e-19 100.1 111 48.6
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 3.3e-19 99.4 104 55.8
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 3.3e-19 99.4 109 51.4
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 5.6e-19 98.6 109 52.3
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 5.6e-19 98.6 100 58.0
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 5.6e-19 98.6 109 51.4
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 5.6e-19 98.6 109 52.3
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 5.6e-19 98.6 109 52.3
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 7.3e-19 98.2 109 52.3
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 9.6e-19 97.8 109 50.5
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 1.2e-18 97.4 87 57.5
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.6e-18 97.1 113 47.8
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.6e-18 97.1 109 51.4
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.6e-18 97.1 109 51.4
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.1e-18 96.7 106 52.8
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 2.8e-18 96.3 109 51.4
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 4.7e-18 95.5 111 47.7
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 4.7e-18 95.5 95 58.9
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 4.7e-18 95.5 110 50.0
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 4.7e-18 95.5 109 50.5
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 6.2e-18 95.1 109 50.5
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 6.2e-18 95.1 111 47.7
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 8.1e-18 94.7 109 49.5
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 1.4e-17 94.0 109 46.8
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 1.8e-17 93.6 112 47.3
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.8e-17 93.6 109 48.6
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.8e-17 93.6 109 49.5
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.8e-17 93.6 109 48.6
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 2.4e-17 93.2 113 45.1
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 2.4e-17 93.2 109 46.8
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 3.1e-17 92.8 109 48.6
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 3.1e-17 92.8 109 46.8
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 5.2e-17 92.0 109 47.7
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 5.2e-17 92.0 107 46.7
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 6.9e-17 91.7 113 45.1
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 6.9e-17 91.7 109 47.7
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 1.2e-16 90.9 109 46.8
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 1.2e-16 90.9 109 46.8
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 1.2e-16 90.9 127 41.7
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 1.2e-16 90.9 134 44.8
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.5e-16 90.5 109 45.9
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 1.5e-16 90.5 109 45.9
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.5e-16 90.5 109 45.9
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.0e-16 90.1 109 45.9
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 3.4e-16 89.4 109 45.9
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 3.4e-16 89.4 109 45.9
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 7.6e-16 88.2 109 44.0
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.3e-15 87.4 104 48.1
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 2.2e-15 86.7 192 35.4
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 3.8e-15 85.9 109 45.0
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 1.1e-14 84.3 156 37.2
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.4e-14 84.0 70 62.9
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 2.4e-14 83.2 70 61.4
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 5.4e-14 82.0 71 60.6
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 5.4e-14 82.0 100 49.0
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 7.8e-13 78.2 70 61.4
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.7e-12 77.0 106 40.6
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.0e-12 76.3 100 46.0
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 3.9e-12 75.9 62 62.9
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 3.9e-12 75.9 100 46.0
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 5.1e-12 75.5 69 55.1
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 1.5e-11 73.9 110 39.1
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.5e-11 73.9 106 41.5
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 1.9e-11 73.6 100 46.0
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.9e-11 73.6 90 48.9
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.5e-11 73.2 70 55.7
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 2.5e-11 73.2 100 45.0
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 7.3e-11 71.6 55 65.5
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 9.0e-09 64.7 91 46.2
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 1.5e-08 63.9 103 36.9
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 9.9e-08 61.2 146 30.1
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 1.1e-06 57.8 111 33.3
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 2.4e-06 56.6 108 32.4


User provided reference genes

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