Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G022900 Manihot esculenta HOM05D008807 ORTHO05D010580 5.3e-47 190.7 95 100.0
Manes.05G157800 Manihot esculenta HOM05D008807 ORTHO05D010580 1.9e-28 129.0 96 74.0
Potri.005G228800 Populus trichocarpa HOM05D008807 ORTHO05D010580 9.1e-15 83.6 92 56.5
Haze_17940 Corylus avellana HOM05D008807 ORTHO05D010580 7.7e-14 80.5 72 62.5
Thecc.08G029700 Theobroma cacao HOM05D008807 ORTHO05D010580 1.5e-12 76.3 80 53.8
Potri.002G034300 Populus trichocarpa HOM05D008807 ORTHO05D010580 9.5e-12 73.6 103 48.5
Gohir.D06G004700 Gossypium hirsutum HOM05D008807 ORTHO05D010580 1.2e-11 73.2 69 58.0
Gorai.010G009300 Gossypium raimondii HOM05D008807 ORTHO05D010580 1.2e-11 73.2 69 58.0
Cpa.g.sc123.50 Carica papaya HOM05D008807 ORTHO05D010580 1.6e-11 72.8 74 51.4
Cfa018176 Carpinus fangiana HOM05D008807 ORTHO05D010580 1.0e-10 70.1 101 48.5
QL02p009078 Quercus lobata HOM05D008807 ORTHO05D010580 1.4e-10 69.7 68 58.8
Gohir.A06G009200 Gossypium hirsutum HOM05D008807 ORTHO05D010580 3.0e-10 68.6 69 55.1
Sabra05G0176700 Salix brachista HOM05D008807 ORTHO05D010580 6.8e-10 67.4 97 45.4
Prupe.1G377200 Prunus persica HOM05D008807 ORTHO05D010580 1.2e-09 66.6 81 51.9
Ciclev10002762m.g Citrus clementina HOM05D008807 ORTHO05D010580 2.0e-09 65.9 71 56.3
MD15G1024800 Malus domestica HOM05D008807 ORTHO05D010580 2.0e-09 65.9 80 47.5
Haze_17942 Corylus avellana HOM05D008807 ORTHO05D010580 4.4e-09 64.7 68 55.9
Glyma.04G031000 Glycine max HOM05D014928 ORTHO05D010580 4.4e-09 64.7 93 48.4
TAR376G0370 Trochodendron aralioides HOM05D008807 ORTHO05D010580 4.4e-09 64.7 56 58.9
MD08G1029300 Malus domestica HOM05D008807 ORTHO05D010580 1.3e-08 63.2 101 41.6
Nn5g29649 Nelumbo nucifera HOM05D008807 ORTHO05D010580 1.3e-08 63.2 65 50.8
TPR.G12350 Trifolium pratense HOM05D014928 ORTHO05D010580 2.2e-08 62.4 65 50.8
TAR625G0014 Trochodendron aralioides HOM05D008807 ORTHO05D010580 2.2e-08 62.4 56 62.5
GSVIVG01009733001 Vitis vinifera HOM05D008807 ORTHO05D010580 4.9e-08 61.2 66 53.0
arahy.Tifrunner.gnm1.ann1.08WRUD Arachis hypogaea HOM05D001173 ORTHO05D010580 6.3e-08 60.8 65 55.4
arahy.Tifrunner.gnm1.ann1.KF8GDN Arachis hypogaea HOM05D014928 ORTHO05D010580 6.3e-08 60.8 65 55.4
Lalb_Chr11g0062291 Lupinus albus HOM05D014928 ORTHO05D010580 1.1e-07 60.1 72 48.6
TWI56G1450 Tripterygium wilfordii HOM05D061360 ORTHO05D010580 1.1e-07 60.1 60 65.0
Phvul.009G059100 Phaseolus vulgaris HOM05D014928 ORTHO05D010580 1.4e-07 59.7 77 50.6
FAN15G1874 Fragaria x ananassa HOM05D008807 ORTHO05D010580 2.4e-07 58.9 57 61.4
FAN20G0471 Fragaria x ananassa HOM05D008807 ORTHO05D010580 2.4e-07 58.9 57 61.4
FAN27G2218 Fragaria x ananassa HOM05D008807 ORTHO05D010580 2.4e-07 58.9 57 61.4
CiPaw.15G081000 Carya illinoinensis HOM05D008807 ORTHO05D010580 3.1e-07 58.5 60 61.7
Lj1g0017273 Lotus japonicus HOM05D014928 ORTHO05D010580 5.4e-07 57.8 73 49.3
PGR083G1167 Punica granatum HOM05D008807 ORTHO05D010580 5.4e-07 57.8 76 47.4
MBI16_g07724_MAGBIO Magnolia biondii HOM05D008807 ORTHO05D010580 7.0e-07 57.4 55 54.5
Medtr3g112000 Medicago truncatula HOM05D014928 ORTHO05D010580 7.0e-07 57.4 75 45.3
Psat0s1058g0040 Pisum sativum HOM05D005598 ORTHO05D006587 7.0e-07 57.4 59 50.8
RcHm_v2.0_Chr6g0301311 Rosa chinensis HOM05D008807 ORTHO05D010580 7.0e-07 57.4 57 59.6
CiPaw.15G081100 Carya illinoinensis HOM05D008807 ORTHO05D010580 9.2e-07 57.0 71 56.3
Dinv36101 Davidia involucrata HOM05D010025 ORTHO05D010580 1.6e-06 56.2 73 49.3
Gorai.005G108400 Gossypium raimondii HOM05D008807 ORTHO05D010580 1.6e-06 56.2 70 50.0
Aqoxy6G01147 Aquilegia oxysepala HOM05D008807 ORTHO05D010580 2.0e-06 55.8 90 42.2
Glyma.06G030800 Glycine max HOM05D014928 ORTHO05D010580 2.0e-06 55.8 52 61.5
HPP92_008315 Vanilla planifolia HOM05D008807 ORTHO05D010580 2.0e-06 55.8 81 39.5
VMungo1309G1535 Vigna mungo HOM05D014928 ORTHO05D010580 2.7e-06 55.5 74 50.0
Gohir.A03G079200 Gossypium hirsutum HOM05D008807 ORTHO05D010580 3.5e-06 55.1 70 48.6
CSS0043815 Camellia sinensis var. sinensis HOM05D010025 ORTHO05D013126 4.5e-06 54.7 75 48.0
CDE06G2173 Ceratophyllum demersum HOM05D008807 ORTHO05D010580 4.5e-06 54.7 83 42.2
Gohir.D02G095100 Gossypium hirsutum HOM05D008807 ORTHO05D010580 4.5e-06 54.7 70 48.6
TWI36G0650 Tripterygium wilfordii HOM05D061360 ORTHO05D010580 5.9e-06 54.3 75 44.0
CANSAT25G2084 Cannabis sativa HOM05D008807 ORTHO05D010580 7.8e-06 53.9 73 50.7
THA.LOC104801916 Tarenaya hassleriana HOM05D012410 ORTHO05D014333 7.8e-06 53.9 76 44.7


User provided reference genes

Program Settings