Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.4e-251 872.5 428 100.0
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 5.7e-181 637.9 429 73.7
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 1.4e-179 633.3 430 72.3
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 3.6e-175 618.6 429 70.4
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 6.7e-174 614.4 429 69.9
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 5.7e-173 611.3 428 69.4
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 2.8e-172 609.0 429 69.2
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 1.8e-171 606.3 456 66.2
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 3.1e-171 605.5 429 69.0
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 5.3e-171 604.7 428 69.6
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 6.9e-171 604.4 431 69.4
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 8.5e-169 597.4 429 67.1
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 2.7e-167 592.4 429 69.7
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 2.7e-167 592.4 431 68.2
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.7e-167 591.7 428 68.0
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 6.1e-167 591.3 428 67.3
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 3.9e-166 588.6 428 67.1
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 6.7e-166 587.8 429 68.3
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 1.3e-164 583.6 428 66.4
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 1.8e-163 579.7 426 65.3
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 2.6e-162 575.9 431 65.7
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 1.3e-161 573.5 430 65.3
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 3.6e-159 565.5 428 63.6
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 1.0e-158 563.9 429 64.8
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 6.7e-158 561.2 428 62.9
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 8.8e-158 560.8 429 64.3
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 3.3e-157 558.9 426 63.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 3.3e-157 558.9 428 62.9
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 4.4e-157 558.5 427 63.0
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 9.7e-157 557.4 427 63.2
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 1.7e-156 556.6 426 62.9
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 3.7e-156 555.4 428 64.0
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 2.4e-155 552.7 432 63.9
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 5.9e-154 548.1 430 63.0
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 2.2e-153 546.2 429 63.6
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 2.2e-153 546.2 429 63.6
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 8.5e-153 544.3 427 62.1
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.9e-152 543.1 431 61.5
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.9e-152 543.1 427 60.9
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 3.2e-152 542.3 429 60.8
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 4.2e-152 542.0 433 61.0
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 4.2e-152 542.0 429 60.6
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 7.2e-152 541.2 429 60.8
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 7.2e-152 541.2 429 59.2
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 9.4e-152 540.8 428 62.1
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.6e-151 538.9 427 62.3
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.4e-150 537.0 428 60.7
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.8e-150 536.6 429 60.4
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 5.2e-150 535.0 429 60.1
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 6.7e-150 534.6 431 59.9
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 7.5e-149 531.2 431 59.2
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.7e-148 530.0 427 60.9
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 1.8e-147 526.6 427 60.0
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 4.1e-147 525.4 461 56.8
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.1e-147 525.4 521 52.2
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 7.0e-147 524.6 431 58.5
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 2.7e-146 522.7 431 59.9
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 5.9e-146 521.5 428 60.7
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 7.7e-146 521.2 426 58.7
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.0e-145 520.8 429 59.4
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 2.2e-145 519.6 430 57.7
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 2.9e-145 519.2 429 60.6
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 2.1e-143 513.1 428 57.5
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.0e-142 510.8 428 57.2
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 3.0e-142 509.2 431 59.2
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 4.0e-142 508.8 427 58.8
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 5.2e-142 508.4 481 55.5
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 2.0e-141 506.5 430 58.8
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 2.6e-141 506.1 430 60.2
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 5.7e-141 505.0 428 59.8
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 7.5e-141 504.6 428 58.6
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 9.8e-141 504.2 430 58.6
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 2.2e-140 503.1 427 59.7
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 2.8e-140 502.7 426 58.2
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 3.7e-140 502.3 428 59.6
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 6.3e-140 501.5 427 59.5
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.8e-139 500.0 427 56.9
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 2.4e-139 499.6 428 58.2
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.1e-139 499.2 426 55.4
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 2.7e-138 496.1 427 60.2
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 4.5e-138 495.4 428 58.2
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.0e-137 494.2 427 54.8
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 6.6e-137 491.5 425 58.1
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 8.6e-137 491.1 429 56.4
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 5.2e-134 481.9 429 56.6
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 4.4e-133 478.8 448 58.0
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 5.7e-133 478.4 429 57.1
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 2.4e-131 473.0 432 56.9
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 2.0e-130 469.9 479 52.0
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 3.9e-129 465.7 425 56.0
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.3e-128 462.2 311 73.0
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 8.0e-127 458.0 318 70.1
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 3.6e-119 432.6 432 51.6
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 6.8e-118 428.3 436 50.9
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 2.4e-115 419.9 440 49.1
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 1.1e-112 411.0 358 55.0
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.6e-111 407.1 336 58.6
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.0e-106 388.7 442 48.4
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 6.0e-106 388.7 440 46.8
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 4.2e-83 312.8 442 39.1
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 4.6e-82 309.3 223 67.7
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.8e-78 297.4 417 39.3
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 1.8e-78 297.4 289 52.2
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.8e-76 289.7 443 37.7
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 1.1e-70 271.6 433 37.2
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.5e-69 267.7 335 43.6
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.2e-68 263.8 327 43.4
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 9.7e-64 248.4 208 57.7
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 3.6e-42 176.8 108 75.9
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.1e-35 155.2 196 45.9
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.6e-26 124.8 76 78.9
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 8.3e-23 112.5 119 43.7
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 2.0e-21 107.8 138 39.1
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 1.6e-18 98.2 109 53.2
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 3.0e-17 94.0 57 71.9
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 9.2e-14 82.4 69 62.3
MBI06_g37498_MAGBIO Magnolia biondii HOM05D002910 ORTHO05D030039 6.8e-09 66.2 98 38.8
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 8.9e-09 65.9 69 49.3
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 1.9e-06 58.2 188 26.1


User provided reference genes

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