Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 5.3e-71 271.2 163 100.0
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 3.7e-48 195.3 163 76.1
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 6.3e-48 194.5 159 76.7
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.3e-48 194.5 161 78.9
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 6.3e-48 194.5 159 77.4
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 8.2e-48 194.1 158 75.9
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.1e-47 193.7 164 77.4
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.1e-47 193.7 159 77.4
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 9.1e-47 190.7 161 75.8
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.2e-46 190.3 159 77.4
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 2.0e-46 189.5 159 78.0
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.0e-46 189.5 161 74.5
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 3.5e-46 188.7 159 76.1
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.5e-46 188.3 161 77.0
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 5.9e-46 188.0 159 74.2
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 5.9e-46 188.0 161 74.5
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 7.7e-46 187.6 124 77.4
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 1.0e-45 187.2 161 75.2
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.7e-45 186.4 159 74.8
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.7e-45 186.4 159 74.8
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 2.9e-45 185.7 154 76.6
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 3.8e-45 185.3 161 76.4
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.5e-45 184.5 161 73.9
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 8.5e-45 184.1 159 75.5
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.5e-44 183.3 159 75.5
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 4.2e-44 181.8 158 71.5
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 5.5e-44 181.4 159 73.0
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.3e-42 176.0 124 73.4
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 2.3e-42 176.0 124 73.4
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 2.3e-42 176.0 129 72.1
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 4.0e-42 175.3 154 74.7
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 5.2e-42 174.9 155 75.5
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 1.2e-41 173.7 159 73.6
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.2e-41 173.7 153 74.5
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.2e-41 173.7 150 72.7
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.2e-41 173.7 159 71.7
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 4.4e-41 171.8 159 69.8
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 4.4e-41 171.8 124 75.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 5.7e-41 171.4 124 72.6
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 7.5e-41 171.0 159 69.2
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 9.7e-41 170.6 116 74.1
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 1.3e-40 170.2 170 69.4
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 4.8e-40 168.3 163 68.7
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 4.8e-40 168.3 159 68.6
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.4e-39 166.8 156 73.1
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.4e-39 166.0 159 71.7
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 2.4e-39 166.0 161 72.7
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 2.4e-39 166.0 160 70.6
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 3.1e-39 165.6 154 70.8
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 7.0e-39 164.5 163 68.1
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 7.0e-39 164.5 159 70.4
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 2.0e-38 162.9 148 73.0
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 2.7e-38 162.5 160 70.0
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 2.7e-38 162.5 162 69.8
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 4.5e-38 161.8 164 67.7
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 5.9e-38 161.4 153 69.3
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 7.7e-38 161.0 163 66.9
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.0e-37 160.6 159 69.8
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.3e-37 160.2 152 71.1
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.3e-37 160.2 162 67.9
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.7e-37 159.8 159 70.4
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.9e-37 159.1 198 59.1
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 3.8e-37 158.7 129 69.8
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 5.0e-37 158.3 150 70.0
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 6.5e-37 157.9 160 66.9
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 6.5e-37 157.9 148 69.6
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.5e-36 156.8 159 67.9
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.5e-36 156.8 128 68.0
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 2.5e-36 156.0 146 71.2
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 2.5e-36 156.0 154 67.5
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 4.2e-36 155.2 159 68.6
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 7.2e-36 154.5 129 62.0
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.2e-35 153.7 134 72.4
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.1e-35 152.9 146 69.9
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 8.0e-35 151.0 129 61.2
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 8.0e-35 151.0 124 62.9
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 8.0e-35 151.0 124 62.9
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 4.0e-34 148.7 192 46.4
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 5.2e-34 148.3 201 55.7
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.6e-33 146.0 123 76.4
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 4.4e-33 145.2 110 66.4
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 4.4e-33 145.2 151 64.2
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 5.7e-33 144.8 113 63.7
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 9.8e-33 144.1 110 66.4
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 2.2e-32 142.9 110 66.4
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 2.8e-32 142.5 137 71.5
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.8e-32 141.7 163 65.6
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 6.3e-32 141.4 115 63.5
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.4e-31 140.2 101 73.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.2e-30 137.1 115 62.6
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 2.0e-30 136.3 170 50.0
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.5e-30 135.6 156 53.8
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.9e-29 132.5 82 75.6
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 2.5e-28 129.4 118 68.6
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 2.8e-27 125.9 141 57.4
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.8e-26 123.2 127 62.2
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 8.9e-26 120.9 111 67.6
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 2.6e-25 119.4 121 55.4
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 2.6e-25 119.4 124 55.6
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 5.4e-23 111.7 116 60.3
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 7.3e-20 101.3 126 56.3
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 3.6e-19 99.0 101 59.4
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 1.4e-18 97.1 81 65.4
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 3.1e-18 95.9 94 53.2
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 3.1e-18 95.9 99 58.6
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 2.0e-14 83.2 163 39.9
EL10Ac4g08279 Beta vulgaris HOM05D007166 ORTHO05D009039 2.4e-07 59.7 67 56.7


User provided reference genes

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