Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G014200 Manihot esculenta HOM05D007355 ORTHO05D009343 3.1e-69 265.0 131 100.0
Manes.05G148200 Manihot esculenta HOM05D007355 ORTHO05D009343 4.0e-37 158.3 133 69.9
Thecc.08G043500 Theobroma cacao HOM05D007355 ORTHO05D009343 4.0e-37 158.3 130 68.5
QL02p011487 Quercus lobata HOM05D007355 ORTHO05D009343 1.5e-36 156.4 129 66.7
CiPaw.08G065900 Carya illinoinensis HOM05D007355 ORTHO05D009343 1.3e-35 153.3 132 63.6
COL.COLO4_26156 Corchorus olitorius HOM05D007355 ORTHO05D009343 1.6e-33 146.4 132 63.6
Gorai.009G194900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.0e-32 143.7 131 66.4
Potri.005G238400 Populus trichocarpa HOM05D007355 ORTHO05D009343 1.3e-32 143.3 129 63.6
Sabra05G0184200 Salix brachista HOM05D007355 ORTHO05D009343 6.6e-32 141.0 129 63.6
Gohir.D05G189650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 8.7e-32 140.6 131 65.6
Gohir.A05G186732 Gossypium hirsutum HOM05D007355 ORTHO05D009343 7.4e-31 137.5 131 64.9
Lalb_Chr14g0369841 Lupinus albus HOM05D007355 ORTHO05D009343 3.6e-30 135.2 132 54.5
Gorai.009G270200 Gossypium raimondii HOM05D007355 ORTHO05D009343 8.1e-30 134.0 90 75.6
Ciclev10003277m.g Citrus clementina HOM05D007355 ORTHO05D009343 1.1e-29 133.7 86 76.7
Gohir.D05G258650 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.4e-29 133.3 90 75.6
Gohir.A05G257150 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.4e-29 132.5 90 74.4
Duzib093G0416 Durio zibethinus HOM05D007355 ORTHO05D009343 5.3e-29 131.3 90 76.7
Hma1.2p1_0638F.1_g193820 Hydrangea macrophylla HOM05D007355 ORTHO05D009343 2.6e-28 129.0 132 56.1
Solyc04g081380.1 Solanum lycopersicum HOM05D007355 ORTHO05D009343 4.5e-28 128.3 138 53.6
Gohir.D06G000500 Gossypium hirsutum HOM05D007355 ORTHO05D009343 1.7e-27 126.3 102 70.6
Gorai.010G004900 Gossypium raimondii HOM05D007355 ORTHO05D009343 1.7e-27 126.3 102 70.6
PGSC0003DMG400009860 Solanum tuberosum HOM05D007355 ORTHO05D009343 1.7e-27 126.3 138 52.9
Gohir.A06G004700 Gossypium hirsutum HOM05D007355 ORTHO05D009343 2.2e-27 125.9 102 70.6
TAR625G0791 Trochodendron aralioides HOM05D007355 ORTHO05D009343 2.2e-27 125.9 129 56.6
PGR083G2600 Punica granatum HOM05D007355 ORTHO05D009343 1.1e-26 123.6 125 56.0
arahy.Tifrunner.gnm1.ann1.Y2NNQI Arachis hypogaea HOM05D007355 ORTHO05D009343 1.9e-26 122.9 136 55.1
Haze_22626 Corylus avellana HOM05D007355 ORTHO05D009343 1.9e-26 122.9 91 70.3
FAN20G0162 Fragaria x ananassa HOM05D007355 ORTHO05D009343 5.5e-26 121.3 115 53.0
Cpa.g.sc26.34 Carica papaya HOM05D007355 ORTHO05D009343 2.1e-25 119.4 131 55.7
arahy.Tifrunner.gnm1.ann1.PADY8Y Arachis hypogaea HOM05D007355 ORTHO05D009343 2.7e-25 119.0 142 52.1
Cfa013942 Carpinus fangiana HOM05D007355 ORTHO05D009343 3.5e-25 118.6 92 68.5
FAN15G2202 Fragaria x ananassa HOM05D007355 ORTHO05D009343 6.0e-25 117.9 118 52.5
FAN27G0012 Fragaria x ananassa HOM05D007355 ORTHO05D009343 6.0e-25 117.9 118 52.5
Glyma.04G024700 Glycine max HOM05D007355 ORTHO05D009343 2.3e-24 115.9 94 62.8
Glyma.06G024800 Glycine max HOM05D007355 ORTHO05D009343 2.3e-24 115.9 94 62.8
Lj5g0016063 Lotus japonicus HOM05D007355 ORTHO05D009343 6.7e-24 114.4 129 46.5
VMungo1309G0669 Vigna mungo HOM05D007355 ORTHO05D009343 6.7e-24 114.4 92 62.0
TPR.G26402 Trifolium pratense HOM05D007355 ORTHO05D009343 1.5e-23 113.2 96 64.6
MD15G1013100 Malus domestica HOM05D007355 ORTHO05D009343 3.3e-23 112.1 94 59.6
Peaxi162Scf00400g00042 Petunia axillaris HOM05D007355 ORTHO05D009343 5.6e-23 111.3 137 50.4
ClCG05G018320 Citrullus lanatus HOM05D007355 ORTHO05D009343 2.8e-22 109.0 101 56.4
Atru.chr13.303 Acer truncatum HOM05D007355 ORTHO05D009343 3.7e-22 108.6 76 68.4
Ca_13424_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 3.7e-22 108.6 88 67.0
Ca_13425_v3 Cicer arietinum L. HOM05D007355 ORTHO05D009343 3.7e-22 108.6 88 67.0
CSS0013130 Camellia sinensis var. sinensis HOM05D007355 ORTHO05D009343 4.8e-22 108.2 91 64.8
Lalb_Chr22g0354351 Lupinus albus HOM05D007355 ORTHO05D009343 6.2e-22 107.8 88 61.4
Phvul.009G016500 Phaseolus vulgaris HOM05D007355 ORTHO05D009343 6.2e-22 107.8 125 50.4
Sed0019478 Sechium edule HOM05D007355 ORTHO05D009343 6.2e-22 107.8 98 60.2
CiPaw.07G150900 Carya illinoinensis HOM05D007355 ORTHO05D009343 8.1e-22 107.5 115 58.3
Dinv39511 Davidia involucrata HOM05D007355 ORTHO05D009343 1.1e-21 107.1 115 55.7
Actinidia37930 Actinidia chinensis HOM05D007355 ORTHO05D009343 2.4e-21 105.9 118 52.5
DCAR_017465 Daucus carota HOM05D007355 ORTHO05D009343 4.0e-21 105.1 132 47.7
Nn1g05885 Nelumbo nucifera HOM05D007355 ORTHO05D009343 2.0e-20 102.8 130 50.8
Sc15g0005040 Simmondsia chinensis HOM05D007355 ORTHO05D009343 2.0e-20 102.8 93 57.0
Aqoxy5G01778 Aquilegia oxysepala HOM05D007355 ORTHO05D009343 2.6e-20 102.4 136 51.5
Lj1g0016145 Lotus japonicus HOM05D007355 ORTHO05D009343 2.6e-20 102.4 97 60.8
Nn5g30158 Nelumbo nucifera HOM05D007355 ORTHO05D009343 3.4e-20 102.1 134 51.5
CsaV3_3G045820 Cucumis sativus L. HOM05D007355 ORTHO05D009343 7.6e-20 100.9 97 57.7
Medtr1g025150 Medicago truncatula HOM05D007355 ORTHO05D009343 1.3e-19 100.1 85 62.4
Prupe.1G366200 Prunus persica HOM05D007355 ORTHO05D009343 3.8e-19 98.6 101 59.4
DCAR_013865 Daucus carota HOM05D007355 ORTHO05D009343 9.3e-18 94.0 132 42.4
MBI05_g15356_MAGBIO Magnolia biondii HOM05D007355 ORTHO05D009343 1.2e-17 93.6 117 51.3
Sed0024841 Sechium edule HOM05D007355 ORTHO05D009343 1.6e-17 93.2 85 61.2
C08p19840 Brassica napus HOM05D007355 ORTHO05D009343 6.0e-17 91.3 117 44.4
BolC8t49623H Brassica oleracea HOM05D007355 ORTHO05D009343 6.0e-17 91.3 117 44.4
Sp1g17750 Schrenkiella parvula HOM05D007355 ORTHO05D009343 6.0e-17 91.3 117 44.4
BcaC07g39013 Brassica carinata HOM05D007355 ORTHO05D009343 7.9e-17 90.9 117 44.4
ClCG08G014360 Citrullus lanatus HOM05D007355 ORTHO05D009343 7.9e-17 90.9 87 59.8
AL1G32690 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 1.0e-16 90.5 78 61.5
MELO3C011006.2 Cucumis melo HOM05D007355 ORTHO05D009343 2.3e-16 89.4 93 55.9
CsaV3_2G029470 Cucumis sativus L. HOM05D007355 ORTHO05D009343 2.3e-16 89.4 90 57.8
Lsat_1_v5_gn_2_9841 Lactuca sativa HOM05D007355 ORTHO05D009343 3.0e-16 89.0 98 51.0
A08p29560 Brassica napus HOM05D007355 ORTHO05D009343 5.1e-16 88.2 117 44.4
BraA08t34894Z Brassica rapa HOM05D007355 ORTHO05D009343 5.1e-16 88.2 117 44.4
CARHR020450 Cardamine hirsuta HOM05D007355 ORTHO05D009343 6.7e-16 87.8 113 48.7
Eucgr.F01645 Eucalyptus grandis HOM05D007355 ORTHO05D009343 6.7e-16 87.8 73 58.9
CAN.G311.23 Capsicum annuum HOM05D007355 ORTHO05D009343 8.7e-16 87.4 73 58.9
Carub.0001s1949 Capsella rubella HOM05D007355 ORTHO05D009343 1.5e-15 86.7 108 47.2
SalBow7G4291 Salvia bowleyana HOM05D007355 ORTHO05D009343 2.5e-15 85.9 90 54.4
Ah.11g039070 Amaranthus hybridus HOM05D007355 ORTHO05D009343 3.3e-15 85.5 84 57.1
BcaB03g14421 Brassica carinata HOM05D007355 ORTHO05D009343 4.3e-15 85.1 102 46.1
THA.LOC104814032 Tarenaya hassleriana HOM05D007355 ORTHO05D009343 4.8e-14 81.6 76 57.9
Rhsim07G0246800 Rhododendron simsii HOM05D007355 ORTHO05D009343 1.4e-13 80.1 82 56.1
Thhalv10009918m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 3.1e-13 79.0 76 56.6
Aa31LG4G5940 Aethionema arabicum HOM05D007355 ORTHO05D009343 4.1e-13 78.6 75 54.7
BcaB02g07039 Brassica carinata HOM05D007355 ORTHO05D009343 9.0e-13 77.4 79 54.4
C06p49660 Brassica napus HOM05D007355 ORTHO05D009343 1.5e-12 76.6 81 55.6
BolC6t40005H Brassica oleracea HOM05D007355 ORTHO05D009343 1.5e-12 76.6 81 55.6
BcaC08g47049 Brassica carinata HOM05D007355 ORTHO05D009343 2.0e-12 76.3 77 57.1
Migut.C00824 Erythranthe guttata HOM05D007355 ORTHO05D009343 2.6e-12 75.9 105 46.7
AT1G75717 Arabidopsis thaliana HOM05D007355 ORTHO05D009343 7.6e-12 74.3 76 57.9
Thhalv10019842m.g Eutrema salsugineum HOM05D007355 ORTHO05D009343 7.6e-12 74.3 77 57.1
A07p41240 Brassica napus HOM05D007355 ORTHO05D009343 2.9e-11 72.4 77 54.5
BraA07t31659Z Brassica rapa HOM05D007355 ORTHO05D009343 2.9e-11 72.4 77 54.5
CARHR069120 Cardamine hirsuta HOM05D007355 ORTHO05D009343 3.8e-11 72.0 75 57.3
Carub.0002s2256 Capsella rubella HOM05D007355 ORTHO05D009343 5.0e-11 71.6 77 58.4
DCAR_009926 Daucus carota HOM05D007355 ORTHO05D009343 5.0e-11 71.6 86 52.3
BcaB03g12886 Brassica carinata HOM05D007355 ORTHO05D009343 8.4e-11 70.9 113 42.5
BcaB03g14350 Brassica carinata HOM05D007355 ORTHO05D009343 8.4e-11 70.9 75 46.7
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 1.4e-10 70.1 85 47.1
AL2G35700 Arabidopsis lyrata HOM05D007355 ORTHO05D009343 5.5e-10 68.2 77 53.2
BcaC08g45561 Brassica carinata HOM05D007355 ORTHO05D009343 7.2e-10 67.8 79 50.6
C06p32480 Brassica napus HOM05D007355 ORTHO05D009343 1.6e-09 66.6 79 50.6
BolC6t38371H Brassica oleracea HOM05D007355 ORTHO05D009343 1.6e-09 66.6 79 50.6


User provided reference genes

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