Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 9.4e-59 229.9 113 100.0
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.0e-40 169.1 102 82.4
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 9.8e-40 166.8 102 80.4
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 2.8e-39 165.2 102 81.4
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.1e-38 163.3 94 86.2
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.1e-38 161.8 101 77.2
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 5.4e-38 161.0 106 76.4
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 5.4e-38 161.0 104 77.9
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 7.0e-38 160.6 101 76.2
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 9.1e-38 160.2 101 76.2
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 1.7e-36 156.0 102 79.4
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.2e-36 155.6 101 74.3
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 2.2e-36 155.6 102 77.5
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 2.5e-35 152.1 104 72.1
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 4.2e-35 151.4 101 75.2
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 4.2e-35 151.4 101 75.2
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.8e-34 148.7 103 72.8
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.4e-33 146.4 101 71.3
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.4e-33 146.4 103 70.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.4e-33 146.4 103 70.9
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 2.3e-33 145.6 101 74.3
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 2.3e-33 145.6 101 74.3
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 2.3e-33 145.6 104 70.2
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 3.0e-33 145.2 114 67.5
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 4.0e-33 144.8 103 69.9
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 3.4e-32 141.7 107 67.3
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 4.4e-32 141.4 103 66.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 9.8e-32 140.2 105 67.6
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 9.8e-32 140.2 105 65.7
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 9.8e-32 140.2 101 69.3
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 1.3e-31 139.8 102 70.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.3e-31 139.8 113 61.9
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.7e-31 139.4 97 72.2
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 2.2e-31 139.0 100 69.0
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 2.2e-31 139.0 109 65.1
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 3.7e-31 138.3 108 64.8
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 3.7e-31 138.3 104 70.2
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.9e-31 137.9 110 65.5
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-30 136.0 105 66.7
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 1.8e-30 136.0 105 67.6
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 2.4e-30 135.6 109 63.3
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 4.1e-30 134.8 102 68.6
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 5.4e-30 134.4 106 65.1
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 5.4e-30 134.4 102 66.7
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 7.0e-30 134.0 102 68.6
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 7.0e-30 134.0 107 64.5
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.2e-29 133.3 107 67.3
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.2e-29 133.3 102 68.6
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.0e-29 132.5 106 64.2
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.0e-29 132.5 106 64.2
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 2.7e-29 132.1 113 61.1
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.5e-29 131.7 119 57.1
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.5e-29 131.3 108 62.0
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 5.9e-29 131.0 116 59.5
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 5.9e-29 131.0 105 62.9
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 5.9e-29 131.0 113 60.2
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 5.9e-29 131.0 103 64.1
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 7.8e-29 130.6 116 59.5
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 7.8e-29 130.6 104 67.3
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 1.0e-28 130.2 106 62.3
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 1.3e-28 129.8 102 62.7
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 1.7e-28 129.4 101 63.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 2.3e-28 129.0 116 58.6
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 2.3e-28 129.0 113 60.2
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 2.9e-28 128.6 104 59.6
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 2.9e-28 128.6 116 57.8
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 2.9e-28 128.6 116 57.8
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 2.9e-28 128.6 116 57.8
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.9e-28 128.6 103 60.2
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 2.9e-28 128.6 110 61.8
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 3.8e-28 128.3 114 59.6
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 3.8e-28 128.3 103 63.1
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 5.0e-28 127.9 116 57.8
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 5.0e-28 127.9 119 57.1
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 6.6e-28 127.5 113 58.4
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.1e-27 126.7 102 62.7
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 1.1e-27 126.7 113 59.3
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 3.3e-27 125.2 111 55.9
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 3.3e-27 125.2 101 57.4
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 4.3e-27 124.8 116 57.8
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.6e-27 124.4 107 58.9
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 7.3e-27 124.0 105 61.9
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.2e-26 123.2 103 58.3
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 1.2e-26 123.2 107 60.7
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.6e-26 122.9 106 61.3
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 2.8e-26 122.1 111 54.1
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 2.8e-26 122.1 105 59.0
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 3.6e-26 121.7 117 56.4
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 3.6e-26 121.7 101 61.4
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 6.1e-26 120.9 107 56.1
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 6.1e-26 120.9 103 63.1
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 6.1e-26 120.9 108 57.4
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 1.0e-25 120.2 94 60.6
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.4e-25 119.8 106 58.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 1.8e-25 119.4 105 61.9
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 2.3e-25 119.0 105 55.2
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 3.0e-25 118.6 104 57.7
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 3.0e-25 118.6 114 55.3
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 4.0e-25 118.2 94 61.7
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 4.0e-25 118.2 111 55.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 5.2e-25 117.9 104 58.7
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 6.8e-25 117.5 104 60.6
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 1.2e-24 116.7 108 54.6
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.5e-24 116.3 114 52.6
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 1.5e-24 116.3 114 53.5
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 2.0e-24 115.9 99 60.6
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 5.7e-24 114.4 116 54.3
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 5.7e-24 114.4 116 54.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 2.2e-23 112.5 117 53.8
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 2.9e-23 112.1 102 53.9
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 6.4e-23 110.9 96 55.2
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 1.1e-22 110.2 108 54.6
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.4e-22 109.8 107 55.1
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 1.8e-22 109.4 115 51.3
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 3.2e-22 108.6 115 53.0
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 1.6e-21 106.3 112 50.0
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 4.6e-21 104.8 107 53.3
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 4.6e-21 104.8 105 52.4
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 7.8e-21 104.0 102 51.0
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 1.7e-20 102.8 105 51.4
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 5.0e-20 101.3 110 45.5
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 4.7e-18 94.7 112 44.6
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 2.0e-16 89.4 117 41.0
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 3.7e-15 85.1 108 47.2
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.1e-14 83.6 79 50.6
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 3.0e-12 75.5 61 62.3
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 6.2e-10 67.8 68 51.5
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.9e-08 60.5 56 57.1
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.9e-06 56.2 54 57.4


User provided reference genes

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