Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G011966 Manihot esculenta HOM05D007731 ORTHO05D008483 3.9e-134 481.5 249 100.0
Manes.05G145300 Manihot esculenta HOM05D007731 ORTHO05D008483 7.8e-74 281.2 258 68.2
Potri.002G019700 Populus trichocarpa HOM05D007731 ORTHO05D008483 1.2e-58 230.7 265 57.4
Potri.005G241800 Populus trichocarpa HOM05D007731 ORTHO05D008483 6.2e-55 218.4 262 56.5
Sabra02G0016000 Salix brachista HOM05D007731 ORTHO05D008483 1.8e-54 216.9 263 54.4
Thecc.08G047100 Theobroma cacao HOM05D007731 ORTHO05D008483 6.7e-49 198.4 264 53.4
Duzib093G0569 Durio zibethinus HOM05D007731 ORTHO05D008483 5.6e-48 195.3 262 53.4
Gohir.A05G185300 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.4e-43 180.6 269 50.9
Sabra05G0187200 Salix brachista HOM05D007731 ORTHO05D008483 3.2e-43 179.5 273 50.9
Cpa.g.sc26.305 Carica papaya HOM05D007731 ORTHO05D008483 1.2e-42 177.6 250 51.6
Prupe.1G363100 Prunus persica HOM05D007731 ORTHO05D008483 4.6e-42 175.6 268 50.7
QL02p012129 Quercus lobata HOM05D007731 ORTHO05D008483 1.0e-41 174.5 258 54.3
COL.COLO4_26124 Corchorus olitorius HOM05D007731 ORTHO05D008483 5.1e-41 172.2 281 47.7
RcHm_v2.0_Chr6g0303181 Rosa chinensis HOM05D007731 ORTHO05D008483 1.9e-40 170.2 215 54.4
Gorai.009G193400 Gossypium raimondii HOM05D007731 ORTHO05D008483 5.7e-40 168.7 265 49.8
TAR628G0423 Trochodendron aralioides HOM05D007731 ORTHO05D008483 9.7e-40 167.9 250 48.4
Hma1.2p1_0733F.1_g210180 Hydrangea macrophylla HOM05D007731 ORTHO05D008483 8.2e-39 164.9 258 49.2
TWI56G0526 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 8.2e-39 164.9 205 50.2
CiPaw.07G147300 Carya illinoinensis HOM05D007731 ORTHO05D008483 1.4e-38 164.1 264 47.3
Lj4P799T27 Lonicera japonica HOM05D007731 ORTHO05D008483 5.3e-38 162.2 290 45.9
TAR376G0482 Trochodendron aralioides HOM05D007731 ORTHO05D008483 9.0e-38 161.4 251 47.0
Ciclev10002425m.g Citrus clementina HOM05D007731 ORTHO05D008483 1.3e-36 157.5 258 48.8
Gohir.D05G188100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 8.5e-36 154.8 268 48.1
CSS0037397 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 3.2e-35 152.9 247 49.4
CiPaw.08G067400 Carya illinoinensis HOM05D007731 ORTHO05D008483 3.2e-35 152.9 258 46.1
Dinv39536 Davidia involucrata HOM05D007731 ORTHO05D008483 4.2e-35 152.5 182 53.3
CSS0046256 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 5.5e-35 152.1 258 48.1
TWI12G0892 Tripterygium wilfordii HOM05D007731 ORTHO05D008483 2.1e-34 150.2 233 46.4
Nn6g32002 Nelumbo nucifera HOM05D007731 ORTHO05D008483 6.1e-34 148.7 255 45.5
Gohir.A01G110400 Gossypium hirsutum HOM05D007731 ORTHO05D008483 5.1e-33 145.6 269 46.5
FAN27G0472 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.1e-32 144.4 258 43.8
CSS0005102 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 1.9e-32 143.7 258 46.9
Haze_22661 Corylus avellana HOM05D007731 ORTHO05D008483 1.9e-32 143.7 256 44.5
Cc00_g29330 Coffea canephora HOM05D007731 ORTHO05D008483 2.5e-32 143.3 274 43.4
FvH4_2g38210 Fragaria vesca HOM05D007731 ORTHO05D008483 5.7e-32 142.1 262 45.4
Cfa013976 Carpinus fangiana HOM05D007731 ORTHO05D008483 7.4e-32 141.7 256 44.5
Actinidia16998 Actinidia chinensis HOM05D007731 ORTHO05D008483 1.3e-31 141.0 249 48.6
FAN15G0282 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.8e-30 137.1 226 47.8
FAN20G0947 Fragaria x ananassa HOM05D007731 ORTHO05D008483 1.8e-30 137.1 262 44.3
MSTRG.25262 Avicennia marina HOM05D007731 ORTHO05D008483 5.3e-30 135.6 263 41.8
CANSAT25G3722 Cannabis sativa HOM05D007731 ORTHO05D008483 9.1e-30 134.8 238 46.6
Gohir.D01G097000 Gossypium hirsutum HOM05D007731 ORTHO05D008483 1.2e-29 134.4 269 44.6
Gorai.002G122700 Gossypium raimondii HOM05D007731 ORTHO05D008483 1.2e-29 134.4 269 44.6
CSS0031900 Camellia sinensis var. sinensis HOM05D007731 ORTHO05D008483 4.5e-29 132.5 248 46.0
Dinv31866 Davidia involucrata HOM05D000068 ORTHO05D000084 7.7e-29 131.7 181 50.8
Nn5g30769 Nelumbo nucifera HOM05D007731 ORTHO05D008483 7.7e-29 131.7 148 52.0
Actinidia15437 Actinidia chinensis HOM05D007731 ORTHO05D008483 4.2e-27 125.9 229 47.2
Gohir.D02G098500 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.9e-25 119.4 265 39.6
Eucgr.H00961 Eucalyptus grandis HOM05D007731 ORTHO05D008483 2.0e-24 117.1 286 38.1
ECA233G0921 Erigeron canadensis HOM05D007731 ORTHO05D008483 2.6e-24 116.7 244 41.0
Gorai.005G112400 Gossypium raimondii HOM05D007731 ORTHO05D008483 9.7e-24 114.8 266 39.1
Gohir.A02G083100 Gossypium hirsutum HOM05D007731 ORTHO05D008483 3.7e-23 112.8 257 38.9
Lsat_1_v5_gn_8_30081 Lactuca sativa HOM05D007731 ORTHO05D008483 1.4e-22 110.9 281 39.5
PGSC0003DMG400009876 Solanum tuberosum HOM05D007731 ORTHO05D008483 1.5e-21 107.5 271 38.0
Sed0013309 Sechium edule HOM05D007731 ORTHO05D008483 5.9e-21 105.5 216 41.7
Rhsim06G0016400 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.2e-20 103.6 251 36.3
ClCG08G014190 Citrullus lanatus HOM05D007731 ORTHO05D008483 2.5e-19 100.1 220 38.2
Aqoxy6G02285 Aquilegia oxysepala HOM05D007731 ORTHO05D008483 3.2e-19 99.8 260 37.3
Lj1g0026139 Lotus japonicus HOM05D007731 ORTHO05D008483 5.5e-19 99.0 270 37.4
Phvul.009G009600 Phaseolus vulgaris HOM05D007731 ORTHO05D008483 7.2e-19 98.6 201 41.3
Lalb_Chr23g0266081 Lupinus albus HOM05D007731 ORTHO05D008483 9.4e-19 98.2 202 39.6
VMungo1309G0548 Vigna mungo HOM05D007731 ORTHO05D008483 9.4e-19 98.2 218 39.9
PGR031G1853 Punica granatum HOM05D007731 ORTHO05D008483 2.7e-18 96.7 256 36.7
Rhsim06G0019700 Rhododendron simsii HOM05D007731 ORTHO05D008483 2.7e-18 96.7 240 35.4
CsaV3_2G024250 Cucumis sativus L. HOM05D007731 ORTHO05D008483 1.4e-17 94.4 173 43.4
Glyma.04G023500 Glycine max HOM05D007731 ORTHO05D008483 6.7e-17 92.0 254 37.4
TPR.G34549 Trifolium pratense HOM05D007731 ORTHO05D008483 1.7e-15 87.4 255 34.9
Psat0s2878g0040 Pisum sativum HOM05D007731 ORTHO05D008483 2.4e-14 83.6 180 40.6
PSO541G3821 Papaver somniferum HOM05D007731 ORTHO05D008483 4.1e-14 82.8 279 34.4
SGA_v2.0_scaffold92G28205 Striga asiatica HOM05D007731 ORTHO05D008483 5.3e-14 82.4 255 37.3
Medtr3g113660 Medicago truncatula HOM05D007731 ORTHO05D008483 9.1e-14 81.6 186 39.2
Ca_15482_v3 Cicer arietinum L. HOM05D007731 ORTHO05D008483 1.6e-13 80.9 127 47.2
Sopen04g035340 Solanum pennellii HOM05D007731 ORTHO05D008483 5.9e-13 79.0 119 47.9
Sc15g0004830 Simmondsia chinensis HOM05D007731 ORTHO05D008483 6.5e-12 75.5 191 36.6
arahy.Tifrunner.gnm1.ann1.3IU0NQ Arachis hypogaea HOM05D007731 ORTHO05D008483 1.1e-11 74.7 232 34.5
arahy.Tifrunner.gnm1.ann1.WY2XWP Arachis hypogaea HOM05D007731 ORTHO05D008483 1.9e-11 73.9 235 34.0
DCAR_013881 Daucus carota HOM05D007731 ORTHO05D008483 2.3e-09 67.0 167 37.7
Glyma.06G023400 Glycine max HOM05D007731 ORTHO05D008483 6.7e-09 65.5 245 31.4
ATR0712G013 Amborella trichopoda HOM05D007731 ORTHO05D008483 1.5e-08 64.3 162 35.8
Migut.C00858 Erythranthe guttata HOM05D007731 ORTHO05D008483 3.3e-08 63.2 179 35.2
Atru.chr13.259 Acer truncatum HOM05D007731 ORTHO05D008483 4.4e-08 62.8 110 46.4
A06p16220 Brassica napus HOM05D009961 ORTHO05D008483 1.7e-07 60.8 255 29.0
CsaV3_3G045970 Cucumis sativus L. HOM05D007731 ORTHO05D008483 2.2e-07 60.5 222 33.3
Lalb_Chr19g0131461 Lupinus albus HOM05D007731 ORTHO05D008483 2.2e-07 60.5 48 62.5
MBI18_g10965_MAGBIO Magnolia biondii HOM05D001921 ORTHO05D001784 2.8e-07 60.1 127 39.4
A07p16020 Brassica napus HOM05D009961 ORTHO05D008483 8.2e-07 58.5 251 29.9
BcaB07g32022 Brassica carinata HOM05D009961 ORTHO05D008483 1.4e-06 57.8 255 27.5
BraA07t29330Z Brassica rapa HOM05D009961 ORTHO05D008483 1.4e-06 57.8 251 27.9
MELO3C003742.2 Cucumis melo HOM05D007731 ORTHO05D008483 1.4e-06 57.8 216 32.4
THA.LOC104811421 Tarenaya hassleriana HOM05D009961 ORTHO05D008483 1.4e-06 57.8 175 32.6
BcaC05g25901 Brassica carinata HOM05D009961 ORTHO05D008483 4.1e-06 56.2 255 28.2
C05p18560 Brassica napus HOM05D009961 ORTHO05D008483 4.1e-06 56.2 255 28.2
BolC5t30567H Brassica oleracea HOM05D009961 ORTHO05D008483 4.1e-06 56.2 255 28.2
ClCG05G015580 Citrullus lanatus HOM05D007731 ORTHO05D008483 4.1e-06 56.2 45 68.9
HanXRQChr13g0387161 Helianthus annuus HOM05D007731 ORTHO05D008483 4.1e-06 56.2 142 35.9
AUR62041477 Chenopodium quinoa HOM05D007731 ORTHO05D008483 5.3e-06 55.8 96 43.8
BcaB03g14337 Brassica carinata HOM05D009961 ORTHO05D008483 9.1e-06 55.1 247 27.9


User provided reference genes

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