Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 5.3e-119 431.0 216 100.0
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 4.1e-87 325.1 213 76.1
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.2e-85 319.3 204 77.9
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 1.9e-84 316.2 204 77.0
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.5e-84 315.8 204 77.5
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 1.2e-83 313.5 189 78.8
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 1.6e-83 313.2 185 81.1
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 8.0e-83 310.8 202 76.2
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.0e-82 310.5 200 74.0
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 2.3e-82 309.3 189 77.8
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 3.0e-82 308.9 213 70.9
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 6.8e-82 307.8 175 82.3
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 8.8e-82 307.4 219 70.8
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 8.8e-82 307.4 189 77.2
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 8.8e-82 307.4 189 77.8
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 8.8e-82 307.4 246 65.0
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 2.0e-81 306.2 175 81.7
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.0e-81 306.2 214 72.4
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 3.4e-81 305.4 197 75.6
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 4.4e-81 305.1 202 74.8
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 9.8e-81 303.9 210 68.6
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 2.8e-80 302.4 223 65.0
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 2.8e-80 302.4 222 67.1
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.4e-79 300.1 189 75.7
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.8e-79 299.7 188 76.6
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 1.8e-79 299.7 174 81.6
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.8e-79 299.7 176 81.2
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 2.4e-79 299.3 202 72.8
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 2.4e-79 299.3 172 80.8
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 4.1e-79 298.5 211 70.6
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 5.4e-79 298.1 223 64.1
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 5.4e-79 298.1 208 70.7
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 7.0e-79 297.7 198 72.2
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 1.2e-78 297.0 174 78.2
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 2.0e-78 296.2 174 81.0
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.5e-78 295.4 213 70.0
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 5.9e-78 294.7 172 80.2
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 7.7e-78 294.3 173 78.6
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.3e-77 293.5 209 67.9
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 2.3e-77 292.7 178 76.4
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 3.8e-77 292.0 179 77.1
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 1.9e-76 289.7 174 78.7
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 2.5e-76 289.3 173 79.8
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 2.5e-76 289.3 195 72.8
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 3.3e-76 288.9 202 69.3
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 3.3e-76 288.9 175 80.6
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 2.1e-75 286.2 177 75.1
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 2.8e-75 285.8 175 76.0
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 4.7e-75 285.0 198 69.7
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 6.1e-75 284.6 198 69.7
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 8.0e-75 284.3 171 77.8
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 1.4e-74 283.5 179 76.5
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 2.0e-73 279.6 200 71.5
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 3.4e-73 278.9 180 73.3
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 3.4e-73 278.9 180 73.3
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 5.7e-73 278.1 172 77.9
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 5.7e-73 278.1 175 74.3
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 3.7e-72 275.4 208 64.4
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 1.8e-71 273.1 174 74.7
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 3.2e-71 272.3 176 72.2
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 3.2e-71 272.3 208 66.3
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 3.2e-71 272.3 208 66.3
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 7.0e-71 271.2 208 65.9
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 7.0e-71 271.2 174 72.4
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 9.2e-71 270.8 173 74.6
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 2.7e-70 269.2 208 65.9
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 2.7e-70 269.2 208 65.9
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 2.7e-70 269.2 173 75.1
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 3.5e-70 268.9 172 75.0
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 7.8e-70 267.7 221 61.5
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 1.3e-69 266.9 180 69.4
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.3e-69 266.9 202 64.9
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-69 266.5 217 60.8
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 3.0e-69 265.8 173 72.8
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 3.9e-69 265.4 174 72.4
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 3.9e-69 265.4 179 71.5
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 6.6e-69 264.6 206 63.6
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 3.3e-68 262.3 215 64.7
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 1.6e-67 260.0 191 65.4
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 2.1e-67 259.6 180 68.3
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 4.7e-67 258.5 211 63.0
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.1e-66 255.8 176 72.2
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 5.2e-66 255.0 211 62.6
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 5.2e-66 255.0 174 66.1
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 7.5e-65 251.1 185 67.6
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 2.2e-64 249.6 184 67.9
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.7e-64 248.8 169 69.8
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.1e-63 247.3 158 72.8
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.2e-62 243.8 153 73.2
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 2.0e-62 243.0 175 67.4
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.1e-58 230.7 146 74.0
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 2.6e-57 226.1 137 75.2
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 2.6e-57 226.1 219 54.8
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 2.6e-57 226.1 223 58.3
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 2.6e-57 226.1 173 67.1
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.9e-52 209.9 142 72.5
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.6e-51 206.8 229 51.5
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.2e-49 200.7 167 59.3
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 2.0e-49 199.9 124 80.6
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 5.8e-49 198.4 146 65.8
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 7.6e-49 198.0 160 64.4
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.1e-46 189.9 165 53.3
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.7e-45 186.8 167 52.7
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.3e-44 182.2 189 52.4
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 9.6e-44 181.0 168 50.6
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 4.7e-43 178.7 175 54.9
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 5.2e-42 175.3 152 59.9
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 3.3e-36 156.0 106 65.1
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 5.6e-36 155.2 120 63.3
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 1.6e-35 153.7 123 62.6
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 2.4e-34 149.8 138 58.7
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 4.0e-34 149.1 105 66.7
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 5.3e-34 148.7 85 81.2
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 3.5e-30 136.0 84 75.0
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.1e-28 131.0 139 53.2
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 2.9e-24 116.3 126 48.4
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 3.8e-24 115.9 85 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 2.4e-23 113.2 113 49.6
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 4.2e-23 112.5 71 80.3
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 3.5e-22 109.4 63 76.2
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 6.7e-21 105.1 119 49.6
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 5.6e-20 102.1 99 58.6
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 1.1e-15 87.8 71 66.2
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 9.3e-15 84.7 54 72.2
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 2.3e-13 80.1 101 49.5
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 6.3e-11 72.0 109 33.0
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 1.1e-10 71.2 43 76.7
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 6.9e-10 68.6 36 88.9
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 9.0e-10 68.2 48 68.8
PRCOL_00005216 Prasinoderma coloniale HOM05D006215 ORTHO05D007719 1.0e-08 64.7 166 34.9


User provided reference genes

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