Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 3.8e-179 631.3 309 100.0
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 2.0e-156 555.8 310 85.2
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 2.0e-151 539.3 308 85.4
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.5e-146 522.3 309 79.0
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 6.2e-145 517.7 309 78.3
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 4.1e-141 505.0 310 77.7
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 7.1e-141 504.2 310 77.4
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.6e-140 503.1 309 76.1
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 1.6e-140 503.1 315 76.8
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 1.6e-140 503.1 309 77.7
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 3.9e-139 498.4 309 75.7
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.1e-138 496.9 308 75.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 3.3e-138 495.4 310 75.5
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 4.3e-138 495.0 309 76.7
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 4.3e-138 495.0 309 76.1
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 7.3e-138 494.2 309 76.1
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 1.2e-137 493.4 309 76.4
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.6e-137 491.9 309 75.7
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.4e-136 490.0 305 76.1
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 3.1e-136 488.8 309 75.7
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.5e-135 486.5 310 75.5
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.5e-135 486.5 305 73.4
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 2.6e-135 485.7 309 73.5
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 7.6e-135 484.2 309 74.4
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 9.9e-135 483.8 305 75.1
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 9.9e-135 483.8 310 73.5
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 3.7e-134 481.9 319 71.2
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 3.7e-134 481.9 309 74.8
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 8.3e-134 480.7 315 74.3
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.3e-134 480.7 309 73.5
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 1.1e-133 480.3 305 75.1
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 1.4e-133 479.9 310 74.2
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 2.4e-133 479.2 303 76.6
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 4.1e-133 478.4 309 73.1
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 7.1e-133 477.6 305 72.8
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 7.1e-133 477.6 303 75.2
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 9.2e-133 477.2 305 72.8
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 1.2e-132 476.9 308 73.1
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.2e-132 476.9 306 74.5
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 4.6e-132 474.9 305 74.8
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 4.6e-132 474.9 310 71.6
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 6.0e-132 474.6 281 80.8
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 7.8e-132 474.2 305 72.1
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.1e-131 471.5 303 73.9
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 6.6e-131 471.1 309 72.8
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.9e-130 469.5 305 71.1
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.5e-130 469.2 305 73.1
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 4.3e-130 468.4 340 67.6
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.6e-130 468.0 305 72.8
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 7.3e-130 467.6 309 72.5
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.6e-129 466.5 310 71.0
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.8e-129 465.7 298 74.2
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 4.7e-129 464.9 306 72.5
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.4e-128 463.4 305 73.1
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.8e-128 463.0 310 71.9
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 2.4e-128 462.6 305 72.8
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 2.4e-128 462.6 302 72.2
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 3.1e-128 462.2 305 72.8
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 2.6e-127 459.1 305 73.1
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.6e-127 459.1 298 70.8
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 4.4e-127 458.4 290 75.2
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 1.7e-126 456.4 280 75.7
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.9e-126 455.7 309 71.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 3.8e-126 455.3 307 69.4
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 4.9e-126 454.9 340 65.9
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 6.4e-126 454.5 305 71.8
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 8.4e-126 454.1 305 71.8
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.2e-124 450.3 309 69.9
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 2.1e-124 449.5 308 70.8
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 2.7e-124 449.1 310 70.3
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 3.5e-124 448.7 305 67.5
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 3.5e-124 448.7 305 71.1
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 4.6e-124 448.4 307 69.1
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 7.8e-124 447.6 307 69.1
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 7.3e-122 441.0 306 69.0
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 1.3e-121 440.3 315 68.3
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 2.1e-121 439.5 305 68.2
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.8e-121 439.1 334 65.6
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 6.2e-121 438.0 314 67.8
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 8.1e-121 437.6 305 68.9
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 9.0e-120 434.1 288 72.9
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 7.6e-119 431.0 302 66.2
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 7.6e-119 431.0 296 68.6
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.0e-115 420.6 329 63.8
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 1.3e-115 420.2 283 71.4
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 5.1e-115 418.3 282 72.7
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 1.9e-114 416.4 305 65.2
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 5.6e-114 414.8 345 59.7
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 7.3e-114 414.5 285 71.9
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 8.1e-113 411.0 282 71.6
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 5.8e-111 404.8 316 64.2
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 6.0e-108 394.8 369 55.6
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 9.0e-104 380.9 298 64.4
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 6.7e-99 364.8 320 57.5
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 3.3e-98 362.5 300 59.0
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 7.4e-98 361.3 314 60.2
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 1.3e-97 360.5 277 63.2
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 3.7e-97 359.0 308 59.7
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 3.1e-96 355.9 282 64.5
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 1.4e-93 347.1 302 57.0
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 3.2e-93 345.9 309 57.3
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.2e-92 344.0 222 73.0
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.5e-90 336.3 283 59.0
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 5.7e-90 335.1 224 69.6
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 1.4e-88 330.5 237 67.1
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 5.0e-86 322.0 305 53.4
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.2e-79 300.8 201 69.7
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.3e-75 286.6 315 47.9
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 2.0e-71 273.5 199 62.8
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 2.6e-71 273.1 198 65.2
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 4.5e-71 272.3 236 61.0
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 4.5e-71 272.3 200 66.5
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 5.0e-70 268.9 203 67.5
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.9e-69 266.9 167 76.6
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 6.1e-68 261.9 215 59.5
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 2.2e-57 226.9 137 78.8
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 1.3e-54 217.6 206 54.9
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 5.5e-53 212.2 309 41.1
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.6e-52 210.7 396 34.6
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 2.3e-51 206.8 225 50.7
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 3.4e-50 203.0 153 57.5
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.1e-44 182.2 131 69.5
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 7.8e-39 165.2 299 35.8
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 7.3e-37 158.7 111 65.8
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 6.4e-33 145.6 113 59.3
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 4.1e-32 142.9 306 32.0
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 2.7e-31 140.2 266 35.3
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.6e-28 131.0 83 73.5
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 1.2e-23 114.8 144 44.4
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 3.4e-18 96.7 63 68.3
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.4e-18 96.7 85 60.0
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 2.1e-12 77.4 53 66.0
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 4.7e-12 76.3 180 31.7
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 8.1e-12 75.5 74 54.1
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.8e-11 74.3 79 51.9
SEGI_02138 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 3.8e-09 66.6 62 48.4
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 1.4e-08 64.7 36 86.1


User provided reference genes

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