Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G005201 Manihot esculenta HOM05D006313 ORTHO05D007853 1.3e-229 799.3 390 100.0
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 1.3e-213 746.1 375 97.1
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 4.2e-167 591.7 382 75.7
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 3.1e-162 575.5 372 75.3
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 5.9e-161 571.2 372 75.0
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.3e-160 570.1 372 73.9
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 1.7e-160 569.7 375 72.8
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 1.0e-157 560.5 388 70.1
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 1.2e-156 557.0 374 70.6
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.2e-155 552.7 372 72.8
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 2.8e-155 552.4 376 69.1
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 2.7e-153 545.8 372 71.0
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 5.9e-153 544.7 372 72.8
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 2.9e-152 542.3 373 71.3
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 3.9e-152 542.0 392 66.3
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 1.2e-150 537.0 372 68.0
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 1.4e-149 533.5 374 69.0
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 4.0e-149 531.9 372 67.7
Cpa.g.sc26.189 Carica papaya HOM05D006313 ORTHO05D007853 7.5e-148 527.7 373 67.8
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 1.7e-147 526.6 372 67.7
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 2.2e-147 526.2 372 68.3
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 6.4e-147 524.6 372 66.1
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 1.9e-146 523.1 384 68.5
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 3.2e-146 522.3 372 67.2
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 3.5e-145 518.8 374 67.4
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.1e-143 513.8 402 62.4
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 4.3e-143 511.9 374 65.2
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 2.1e-142 509.6 408 62.3
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 4.0e-141 505.4 375 63.7
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 6.8e-141 504.6 407 61.4
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 4.9e-139 498.4 374 66.3
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.1e-138 497.3 351 68.9
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 1.1e-138 497.3 373 66.0
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 1.4e-138 496.9 372 65.3
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 7.1e-138 494.6 375 63.7
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.0e-136 490.7 372 65.3
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 1.0e-136 490.7 374 64.4
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 1.3e-136 490.3 372 65.1
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 2.3e-136 489.6 374 64.2
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 3.0e-136 489.2 373 63.3
Sed0015221 Sechium edule HOM05D006313 ORTHO05D007853 3.9e-136 488.8 379 63.9
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 2.5e-135 486.1 373 62.7
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 3.3e-135 485.7 374 63.6
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 3.6e-134 482.3 372 64.5
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 2.3e-133 479.6 454 57.3
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 1.5e-132 476.9 372 63.7
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 3.4e-132 475.7 385 61.6
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 3.4e-132 475.7 374 62.3
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 7.6e-132 474.6 404 58.2
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 2.2e-131 473.0 371 62.0
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 1.1e-130 470.7 376 62.5
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 1.4e-130 470.3 371 61.7
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 1.4e-130 470.3 371 61.5
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 9.2e-130 467.6 365 64.7
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 2.1e-129 466.5 374 61.8
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 3.5e-129 465.7 374 61.0
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 1.0e-128 464.2 374 61.0
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 6.6e-128 461.5 374 61.8
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 6.6e-128 461.5 374 60.7
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 1.1e-127 460.7 372 61.0
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 1.9e-127 459.9 374 60.4
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 4.3e-127 458.8 372 60.2
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 5.6e-127 458.4 375 61.1
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 9.6e-127 457.6 371 60.4
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 1.2e-126 457.2 370 61.1
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 1.6e-126 456.8 372 60.5
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 2.1e-126 456.4 376 59.6
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 2.8e-126 456.1 372 60.5
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 1.8e-125 453.4 376 60.1
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 2.4e-125 453.0 373 60.1
Psat2g064920 Pisum sativum HOM05D006313 ORTHO05D007853 4.0e-125 452.2 376 59.8
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 5.2e-125 451.8 375 58.7
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 5.2e-125 451.8 406 57.4
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 1.5e-124 450.3 374 61.0
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 4.4e-124 448.7 372 58.3
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 4.4e-124 448.7 415 54.7
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 8.4e-123 444.5 376 59.0
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 1.1e-122 444.1 375 59.2
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 1.1e-122 444.1 375 59.2
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 5.4e-122 441.8 370 58.1
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.2e-121 440.7 374 58.6
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 1.6e-121 440.3 374 57.5
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 3.5e-121 439.1 371 60.1
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 6.0e-121 438.3 357 61.1
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 3.0e-120 436.0 415 54.2
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 6.6e-120 434.9 372 56.2
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 4.3e-119 432.2 423 53.2
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.6e-118 430.3 372 57.8
FvH4_2g37320 Fragaria vesca HOM05D006313 ORTHO05D007853 6.2e-118 428.3 319 64.6
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 9.0e-117 424.5 374 56.1
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 3.2e-114 416.0 359 56.8
Zm00001eb379580 Zea mays HOM05D006313 ORTHO05D007853 1.6e-113 413.7 369 53.9
COL.COLO4_05223 Corchorus olitorius HOM05D006313 ORTHO05D007853 1.7e-112 410.2 308 66.2
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 5.3e-109 398.7 292 67.5
SEGI_26691 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 3.7e-102 375.9 362 51.1
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 4.0e-101 372.5 375 52.8
Cfa012651 Carpinus fangiana HOM05D006313 ORTHO05D007853 2.1e-97 360.1 301 64.1
TPR.G38702 Trifolium pratense HOM05D006313 ORTHO05D007853 5.1e-96 355.5 319 57.1
Sabra05G0194400 Salix brachista HOM05D006313 ORTHO05D007853 3.4e-92 342.8 237 73.4
CSS0044355 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.4e-85 320.9 293 57.3
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 6.1e-81 305.4 260 56.2
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 1.3e-75 287.7 358 43.0
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 3.8e-75 286.2 353 43.3
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 1.5e-71 274.2 359 40.7
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 1.5e-71 274.2 366 40.2
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 2.7e-60 236.9 176 65.3
Sc02g0009120 Simmondsia chinensis HOM05D006313 ORTHO05D007853 3.3e-42 176.8 162 54.3
Solyc04g082420.3 Solanum lycopersicum HOM05D006313 ORTHO05D007853 2.1e-41 174.1 166 55.4
SEGI_14381 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 1.4e-37 161.4 131 58.8
Os05g0345500 Oryza sativa ssp. japonica HOM05D006313 ORTHO05D007853 7.8e-36 155.6 160 47.5
CBR_g18852 Chara braunii HOM05D006313 ORTHO05D007853 6.6e-19 99.4 135 40.7
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 1.9e-18 97.8 56 76.8
arahy.Tifrunner.gnm1.ann1.9M02QF Arachis hypogaea HOM05D000431 ORTHO05D007853 9.2e-13 79.0 80 48.8
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 7.3e-10 69.3 56 51.8
BcaC01g06849 Brassica carinata HOM05D001597 ORTHO05D001512 1.1e-08 65.5 228 28.5
C03p38940 Brassica napus HOM05D001597 ORTHO05D001512 1.1e-08 65.5 228 28.5
BolC3t16166H Brassica oleracea HOM05D001597 ORTHO05D001512 1.1e-08 65.5 228 28.5
Gohir.A11G093600 Gossypium hirsutum HOM05D001597 ORTHO05D001512 8.9e-08 62.4 269 27.9
Gorai.007G104800 Gossypium raimondii HOM05D001597 ORTHO05D001512 1.2e-07 62.0 268 27.2
A03p31920 Brassica napus HOM05D001597 ORTHO05D001512 1.5e-07 61.6 221 28.5
BraA03t12364Z Brassica rapa HOM05D001597 ORTHO05D001512 1.5e-07 61.6 221 28.5
Gohir.D11G098600 Gossypium hirsutum HOM05D001597 ORTHO05D001512 2.0e-07 61.2 268 27.2
Os06g0251200 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 2.0e-07 61.2 201 26.9
SMO367G0758 Selaginella moellendorffii HOM05D001597 ORTHO05D001512 2.6e-07 60.8 270 27.0
Sed0005870 Sechium edule HOM05D001597 ORTHO05D001512 3.4e-07 60.5 242 26.9
PSO478G0932 Papaver somniferum HOM05D002322 ORTHO05D002536 5.8e-07 59.7 189 27.5
PGSC0003DMG400004985 Solanum tuberosum HOM05D001597 ORTHO05D001512 9.9e-07 58.9 221 28.5
Sopen12g028640 Solanum pennellii HOM05D001597 ORTHO05D001512 1.3e-06 58.5 169 29.6
TPR.G4735 Trifolium pratense HOM05D001597 ORTHO05D001512 1.3e-06 58.5 242 28.1
MELO3C006051.2 Cucumis melo HOM05D001597 ORTHO05D001512 1.7e-06 58.2 229 28.8
CsaV3_6G000990 Cucumis sativus L. HOM05D001597 ORTHO05D001512 1.7e-06 58.2 221 28.1
PSO017G3258 Papaver somniferum HOM05D002322 ORTHO05D002536 1.7e-06 58.2 189 26.5
ClCG05G001010 Citrullus lanatus HOM05D001597 ORTHO05D001512 2.2e-06 57.8 229 28.8
CsaV3_3G008330 Cucumis sativus L. HOM05D001597 ORTHO05D001512 2.2e-06 57.8 229 28.8
Duzib138G1084 Durio zibethinus HOM05D001597 ORTHO05D001512 2.2e-06 57.8 268 26.1
QL04p059786 Quercus lobata HOM05D001597 ORTHO05D001512 2.9e-06 57.4 243 28.0
Solyc12g056130.2 Solanum lycopersicum HOM05D001597 ORTHO05D001512 2.9e-06 57.4 169 29.0
CiPaw.01G070500 Carya illinoinensis HOM05D001597 ORTHO05D001512 3.8e-06 57.0 269 27.1
Lj3g0026639 Lotus japonicus HOM05D001597 ORTHO05D001512 3.8e-06 57.0 247 27.9
Pp3c7_8560 Physcomitrium patens HOM05D001597 ORTHO05D001512 3.8e-06 57.0 270 26.3
PGR031G2434 Punica granatum HOM05D001597 ORTHO05D001512 3.8e-06 57.0 269 28.3
HPP92_019701 Vanilla planifolia HOM05D002322 ORTHO05D002536 3.8e-06 57.0 127 29.9
Zm00001eb305500 Zea mays HOM05D000563 ORTHO05D000536 3.8e-06 57.0 153 28.1
Atru.chr5.607 Acer truncatum HOM05D001597 ORTHO05D001512 4.9e-06 56.6 226 27.4
Actinidia40168 Actinidia chinensis HOM05D002203 ORTHO05D002647 4.9e-06 56.6 190 26.8
Ah.12g052180 Amaranthus hybridus HOM05D001597 ORTHO05D001512 4.9e-06 56.6 167 31.1
CiPaw.02G037700 Carya illinoinensis HOM05D001597 ORTHO05D001512 4.9e-06 56.6 220 26.8
COL.COLO4_06348 Corchorus olitorius HOM05D001597 ORTHO05D001512 4.9e-06 56.6 243 28.4
Mapoly0037s0107 Marchantia polymorpha HOM05D001597 ORTHO05D001512 4.9e-06 56.6 277 27.1
Medtr5g096700 Medicago truncatula HOM05D002322 ORTHO05D002536 4.9e-06 56.6 163 25.2
Medtr8g028190 Medicago truncatula HOM05D001597 ORTHO05D001512 4.9e-06 56.6 243 28.0
Cc05_g15470 Coffea canephora HOM05D002322 ORTHO05D002536 6.4e-06 56.2 152 28.9
Migut.E01225 Erythranthe guttata HOM05D001597 ORTHO05D001512 6.4e-06 56.2 223 29.1
Gohir.A12G110300 Gossypium hirsutum HOM05D001597 ORTHO05D001512 6.4e-06 56.2 242 27.7
Gohir.D12G113300 Gossypium hirsutum HOM05D001597 ORTHO05D001512 6.4e-06 56.2 242 27.7
Gorai.008G122900 Gossypium raimondii HOM05D001597 ORTHO05D001512 6.4e-06 56.2 242 27.7
HanXRQChr16g0523421 Helianthus annuus HOM05D001597 ORTHO05D001512 6.4e-06 56.2 286 24.1
Oeu063055.1 Olea europaea HOM05D001597 ORTHO05D001512 6.4e-06 56.2 220 26.8
Os06g0507400 Oryza sativa ssp. japonica HOM05D001597 ORTHO05D001512 6.4e-06 56.2 229 27.5
SMO364G0812 Selaginella moellendorffii HOM05D002203 ORTHO05D002647 6.4e-06 56.2 156 26.3
SEGI_24077 Sequoiadendron giganteum HOM05D001597 ORTHO05D001512 6.4e-06 56.2 167 30.5
THA.LOC104817329 Tarenaya hassleriana HOM05D001597 ORTHO05D001512 6.4e-06 56.2 269 26.0
ATR0751G123 Amborella trichopoda HOM05D002322 ORTHO05D002536 8.4e-06 55.8 186 29.0
CSS0034767 Camellia sinensis var. sinensis HOM05D002322 ORTHO05D002536 8.4e-06 55.8 152 30.9
Carub.0006s3622 Capsella rubella HOM05D001597 ORTHO05D001512 8.4e-06 55.8 251 28.3
ECA234G3782 Erigeron canadensis HOM05D002322 ORTHO05D002536 8.4e-06 55.8 96 34.4
Eucgr.F04351 Eucalyptus grandis HOM05D002322 ORTHO05D002536 8.4e-06 55.8 120 35.0
Potri.001G468700 Populus trichocarpa HOM05D002322 ORTHO05D002536 8.4e-06 55.8 155 28.4
TWI23G0118 Tripterygium wilfordii HOM05D001597 ORTHO05D001512 8.4e-06 55.8 220 27.7


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