Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.7e-169 598.2 315 100.0
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.9e-163 578.2 315 96.5
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.1e-69 267.7 316 54.7
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 7.3e-69 265.0 315 54.6
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.5e-66 257.3 321 53.0
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 4.2e-64 249.2 312 54.5
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 7.1e-64 248.4 315 52.7
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.6e-63 245.7 317 51.1
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 6.0e-63 245.4 319 52.4
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 4.3e-61 239.2 317 51.7
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 2.8e-60 236.5 304 51.6
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.8e-59 233.8 322 50.0
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 9.0e-59 231.5 306 51.6
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.2e-58 231.1 320 48.8
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.2e-58 231.1 318 48.4
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.8e-58 228.8 318 48.1
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 1.4e-56 224.2 292 50.3
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 1.9e-56 223.8 355 45.1
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 3.2e-56 223.0 275 52.4
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 9.3e-56 221.5 349 47.6
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.1e-55 220.3 320 46.2
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.8e-54 217.2 320 45.9
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 5.1e-54 215.7 307 48.5
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 8.7e-54 214.9 313 47.9
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 8.7e-54 214.9 312 46.8
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.5e-53 214.2 300 49.0
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 1.5e-53 214.2 346 44.2
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 4.3e-53 212.6 320 45.9
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 9.6e-53 211.5 310 45.5
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 2.8e-52 209.9 349 44.4
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.8e-51 207.2 317 45.4
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.8e-51 207.2 317 45.4
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.8e-51 207.2 317 45.7
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 1.7e-49 200.7 314 46.8
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.5e-49 198.7 307 47.9
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.2e-48 196.4 263 52.5
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.6e-47 194.1 303 48.5
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 1.6e-47 194.1 329 45.6
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.3e-46 190.3 316 45.9
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 5.1e-46 189.1 311 44.1
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 5.1e-46 189.1 311 44.1
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 5.1e-46 189.1 311 44.1
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 5.1e-46 189.1 311 43.1
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 1.1e-45 188.0 305 43.3
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.1e-45 188.0 305 43.3
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.9e-45 187.2 251 47.8
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 2.8e-44 183.3 169 62.7
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 3.7e-44 183.0 293 45.7
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 3.7e-44 183.0 314 44.9
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 4.8e-44 182.6 296 45.3
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 6.3e-44 182.2 268 45.5
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 1.8e-43 180.6 300 43.7
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 5.3e-43 179.1 256 48.8
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 6.9e-43 178.7 277 46.6
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 4.5e-42 176.0 312 41.7
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 4.5e-42 176.0 253 47.0
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 5.9e-42 175.6 310 43.2
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.7e-41 174.1 332 41.3
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.9e-40 170.6 279 45.5
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 2.5e-40 170.2 345 40.6
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 4.2e-40 169.5 292 42.5
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 7.2e-40 168.7 268 46.6
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 7.2e-40 168.7 298 47.0
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 2.1e-39 167.2 295 41.7
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.7e-39 166.8 306 41.2
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 4.6e-39 166.0 309 40.5
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 1.4e-38 164.5 303 40.6
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 3.9e-38 162.9 314 42.4
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 3.9e-38 162.9 297 43.8
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.1e-37 161.4 300 41.7
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 1.1e-37 161.4 295 43.1
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.1e-37 161.4 229 51.5
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 1.5e-37 161.0 228 48.2
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 4.3e-37 159.5 299 40.1
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 3.7e-36 156.4 288 42.4
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 4.8e-36 156.0 261 45.2
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 1.4e-35 154.5 257 43.6
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 1.8e-35 154.1 218 47.2
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.8e-35 154.1 300 38.0
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 2.4e-35 153.7 300 39.3
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 4.1e-35 152.9 255 45.1
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 5.3e-35 152.5 304 38.5
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 2.9e-33 146.7 310 40.3
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 3.8e-33 146.4 259 44.0
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 3.8e-33 146.4 157 59.2
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 5.0e-33 146.0 279 43.7
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.2e-32 142.9 195 52.8
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 7.2e-32 142.1 311 37.9
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 7.2e-32 142.1 292 43.5
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.1e-31 140.6 130 64.6
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 2.7e-31 140.2 155 55.5
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 3.6e-31 139.8 307 39.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.0e-30 136.7 258 43.8
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.0e-30 136.7 237 45.1
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 1.3e-28 131.3 221 43.0
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 3.1e-27 126.7 251 39.8
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 3.1e-27 126.7 190 46.8
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 4.1e-27 126.3 307 35.8
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 2.6e-26 123.6 243 43.2
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 4.5e-26 122.9 263 36.5
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 5.9e-26 122.5 341 34.6
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.0e-25 121.7 147 53.7
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.0e-25 121.7 319 37.3
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.0e-25 121.7 260 40.0
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.3e-25 121.3 259 38.6
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.9e-25 120.2 261 38.7
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.8e-25 119.8 145 53.8
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 8.5e-25 118.6 176 46.6
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.9e-24 117.5 219 40.2
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 7.2e-24 115.5 258 36.8
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 4.7e-23 112.8 225 40.9
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 2.3e-22 110.5 275 39.3
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 9.7e-21 105.1 321 34.6
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 9.1e-19 98.6 205 38.5
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.1e-15 85.9 61 70.5
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 2.0e-13 80.9 199 35.2
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 2.6e-13 80.5 78 61.5
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.1e-11 75.1 61 63.9
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.8e-11 74.3 69 58.0
Eucgr.C00650 Eucalyptus grandis HOM05D002094 ORTHO05D007260 9.4e-08 62.0 140 38.6
Eucgr.B00489 Eucalyptus grandis HOM05D002094 ORTHO05D007260 1.2e-07 61.6 140 38.6
Eucgr.B00488 Eucalyptus grandis HOM05D002094 ORTHO05D002113 2.7e-07 60.5 141 37.6
Atru.chr5.2858 Acer truncatum HOM05D064174 ORTHO05D007260 8.0e-07 58.9 105 42.9
Atru.chr5.2854 Acer truncatum HOM05D006245 ORTHO05D007260 1.8e-06 57.8 130 40.0
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 4.0e-06 56.6 52 61.5


User provided reference genes

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