Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 3.1e-96 355.1 183 100.0
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 2.3e-67 259.2 188 72.9
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.2e-63 246.9 188 71.3
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 5.0e-62 241.5 188 67.6
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 1.1e-59 233.8 184 70.7
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-59 233.4 191 68.6
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 4.0e-59 231.9 192 67.7
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 4.0e-59 231.9 188 69.1
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 6.8e-59 231.1 183 67.8
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 1.2e-58 230.3 187 66.3
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 5.8e-58 228.0 180 69.4
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.3e-57 226.9 188 67.0
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.2e-57 226.1 186 67.7
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 2.2e-57 226.1 189 68.3
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 3.7e-57 225.3 181 67.4
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 3.7e-57 225.3 187 65.2
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.1e-56 223.8 188 64.9
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.4e-56 223.4 188 66.5
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.4e-56 223.4 185 67.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 2.4e-56 222.6 193 65.3
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 2.4e-56 222.6 188 66.0
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.2e-55 220.3 185 65.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.1e-55 219.5 188 66.0
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 2.7e-55 219.2 183 66.1
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 3.5e-55 218.8 189 65.1
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 7.8e-55 217.6 181 65.7
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 7.8e-55 217.6 181 65.2
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 7.8e-55 217.6 184 65.8
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.0e-54 217.2 190 64.2
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 1.0e-54 217.2 185 63.8
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.3e-54 216.9 176 65.9
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 2.3e-54 216.1 173 67.6
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 3.9e-54 215.3 181 64.6
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 3.9e-54 215.3 176 64.8
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 6.6e-54 214.5 195 64.1
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 6.6e-54 214.5 184 62.0
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.6e-54 214.2 190 63.2
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.1e-53 213.8 167 66.5
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.1e-53 213.8 182 62.6
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.5e-53 213.4 182 62.6
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.5e-53 213.4 188 63.8
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.9e-53 213.0 179 64.8
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.9e-53 213.0 184 60.9
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.9e-53 213.0 190 62.6
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.9e-53 213.0 188 63.8
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 9.5e-53 210.7 188 63.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.2e-52 210.3 189 64.0
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.6e-52 209.9 180 64.4
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 4.7e-52 208.4 188 59.6
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 4.7e-52 208.4 190 63.7
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 6.2e-52 208.0 183 60.7
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 8.1e-52 207.6 182 60.4
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.8e-51 206.5 180 65.0
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.8e-51 206.5 176 64.2
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 3.1e-51 205.7 185 65.4
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 4.0e-51 205.3 186 59.7
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 8.9e-51 204.1 178 59.6
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 8.9e-51 204.1 174 60.9
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.5e-50 203.4 178 60.1
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.4e-50 202.2 171 64.3
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 4.4e-50 201.8 161 66.5
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 5.8e-50 201.4 174 60.3
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 5.8e-50 201.4 180 63.9
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 9.9e-50 200.7 175 63.4
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 1.3e-49 200.3 183 59.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 1.3e-49 200.3 174 60.3
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 1.7e-49 199.9 164 63.4
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 2.2e-49 199.5 175 62.9
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 2.9e-49 199.1 181 62.4
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 2.9e-49 199.1 164 62.2
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 3.8e-49 198.7 178 59.0
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 3.8e-49 198.7 163 62.0
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.8e-49 198.7 180 60.6
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.1e-48 197.2 164 60.4
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 1.1e-48 197.2 164 60.4
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.1e-48 197.2 178 61.2
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.4e-48 196.8 164 60.4
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 3.2e-48 195.7 137 78.1
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 4.1e-48 195.3 178 57.3
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 4.1e-48 195.3 178 57.3
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 9.2e-48 194.1 144 70.1
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.2e-47 193.7 178 57.9
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 1.6e-47 193.4 154 70.8
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 1.7e-46 189.9 181 56.9
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 3.0e-46 189.1 178 59.0
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 8.7e-46 187.6 238 49.2
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.1e-45 187.2 188 53.2
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.2e-44 183.7 177 57.6
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 8.1e-44 181.0 136 72.1
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 3.8e-41 172.2 136 68.4
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 4.2e-40 168.7 143 64.3
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 5.4e-40 168.3 188 53.2
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 4.6e-39 165.2 141 63.8
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 3.0e-38 162.5 187 48.1
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 4.8e-36 155.2 168 55.4
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.4e-35 152.9 163 50.3
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.2e-34 150.6 169 53.3
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.2e-32 142.1 198 44.9
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 7.9e-31 137.9 121 59.5
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 6.4e-25 118.2 101 66.3
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 3.5e-23 112.5 175 38.9
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 6.0e-23 111.7 71 78.9
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 8.2e-20 101.3 170 42.4
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 8.2e-20 101.3 80 61.2
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 1.1e-19 100.9 72 68.1
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.3e-19 98.6 87 64.4
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.5e-18 97.1 153 34.6
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 3.8e-17 92.4 133 40.6
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 7.9e-15 84.7 109 44.0
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.4e-11 73.9 66 60.6
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.1e-08 64.3 39 74.4
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.2e-08 61.6 58 55.2
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.4e-06 57.4 35 80.0


User provided reference genes

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