Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 2.1e-169 599.0 315 100.0
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.8e-163 579.3 315 96.5
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 2.5e-69 266.5 316 54.7
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 7.3e-69 265.0 315 54.3
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.8e-67 260.4 321 52.6
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 5.4e-64 248.8 317 52.1
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 1.2e-63 247.7 315 52.4
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 3.5e-63 246.1 312 53.2
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 1.0e-62 244.6 319 52.0
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.1e-61 241.1 304 51.6
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 1.5e-61 240.7 322 50.3
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 2.5e-61 240.0 317 51.7
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.1e-59 234.6 320 49.1
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.1e-59 233.0 318 48.4
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.5e-58 230.7 318 48.1
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 2.6e-58 229.9 306 51.0
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 2.9e-57 226.5 278 51.4
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 3.8e-57 226.1 356 45.5
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 2.4e-56 223.4 318 47.8
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 3.2e-56 223.0 354 46.6
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 4.2e-56 222.6 292 49.0
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.6e-55 220.7 320 45.6
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.7e-55 219.9 313 48.6
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 3.5e-55 219.5 347 45.8
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.3e-54 217.6 320 45.3
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 1.8e-54 217.2 300 49.0
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.1e-54 215.7 312 46.2
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 1.9e-53 213.8 310 45.8
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 7.4e-53 211.8 320 45.9
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 1.6e-52 210.7 349 46.1
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 8.2e-52 208.4 317 44.8
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.2e-52 208.4 317 44.8
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.2e-52 208.4 317 45.1
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 1.5e-50 204.1 314 46.8
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.3e-49 201.1 308 48.1
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 3.8e-49 199.5 327 47.7
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.9e-49 199.1 264 52.7
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 6.5e-49 198.7 303 49.2
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 1.6e-47 194.1 311 43.7
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 2.1e-47 193.7 311 44.7
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 2.1e-47 193.7 311 44.7
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 2.1e-47 193.7 311 44.7
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.1e-47 193.7 316 45.6
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 3.5e-47 193.0 308 43.8
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 3.5e-47 193.0 308 43.8
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 6.0e-47 192.2 251 49.0
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 1.9e-45 187.2 263 50.2
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 3.3e-45 186.4 296 45.3
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 4.3e-45 186.0 268 47.0
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 5.7e-45 185.7 169 62.7
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.6e-44 184.1 314 44.6
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 2.2e-44 183.7 300 44.3
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 2.2e-44 183.7 260 48.5
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 3.7e-44 183.0 293 44.4
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 2.4e-43 180.3 310 42.9
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 2.4e-43 180.3 314 42.4
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 5.3e-43 179.1 275 46.5
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 5.3e-43 179.1 332 42.5
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.5e-42 177.6 292 43.2
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 3.4e-42 176.4 299 47.8
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 5.0e-41 172.6 310 41.9
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 6.5e-41 172.2 265 47.5
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 6.5e-41 172.2 304 41.4
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 6.5e-41 172.2 294 41.5
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.1e-40 171.4 279 44.4
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 1.9e-40 170.6 295 43.1
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 2.5e-40 170.2 345 40.6
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 2.7e-39 166.8 303 40.9
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 3.6e-39 166.4 300 42.0
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 4.6e-39 166.0 314 42.4
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.0e-38 164.9 297 42.4
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 5.1e-38 162.5 305 39.0
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 5.1e-38 162.5 288 43.4
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 6.7e-38 162.2 304 39.8
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 1.1e-37 161.4 227 48.0
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 7.4e-37 158.7 259 44.0
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 9.7e-37 158.3 229 49.8
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 2.8e-36 156.8 218 46.8
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.7e-36 156.4 300 40.0
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 6.3e-36 155.6 300 39.0
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 8.2e-36 155.2 310 41.3
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.4e-35 154.5 255 44.3
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 1.8e-35 154.1 261 43.7
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.2e-34 151.4 210 48.1
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.2e-34 151.4 259 44.4
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 5.9e-34 149.1 157 59.9
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.7e-33 147.5 292 43.8
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 1.7e-33 147.5 279 44.1
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.8e-33 146.4 195 54.4
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 1.4e-32 144.4 307 40.4
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.2e-32 143.3 130 65.4
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 5.5e-32 142.5 262 43.5
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 5.5e-32 142.5 241 44.8
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 2.1e-31 140.6 155 55.5
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 7.9e-31 138.7 228 44.3
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 5.7e-29 132.5 307 36.5
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.2e-28 130.6 253 41.5
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.8e-28 130.2 190 47.9
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 4.1e-27 126.3 259 39.4
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 5.3e-27 125.9 337 35.9
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 7.0e-27 125.6 147 55.1
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 7.0e-27 125.6 175 48.0
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 1.2e-26 124.8 263 36.9
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 1.2e-26 124.8 260 40.0
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 1.5e-26 124.4 243 43.6
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 1.5e-26 124.4 219 42.0
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 2.0e-26 124.0 261 39.5
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 2.0e-26 124.0 260 39.6
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.5e-26 122.9 145 54.5
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 3.8e-25 119.8 312 36.9
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 6.1e-23 112.5 225 40.0
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 8.0e-23 112.1 276 38.4
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 1.0e-22 111.7 322 35.1
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 4.1e-19 99.8 200 40.5
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.9e-16 90.9 61 75.4
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.2e-14 82.8 199 35.7
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 3.3e-13 80.1 78 60.3
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.3e-12 78.2 61 67.2
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 1.7e-12 77.8 69 60.9
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.1e-07 60.8 52 65.4
Eucgr.B00488 Eucalyptus grandis HOM05D002094 ORTHO05D002113 2.1e-07 60.8 139 38.1
Eucgr.C00650 Eucalyptus grandis HOM05D002094 ORTHO05D007260 3.6e-07 60.1 163 36.8
Eucgr.B00489 Eucalyptus grandis HOM05D002094 ORTHO05D007260 4.7e-07 59.7 163 36.8
Atru.chr5.2854 Acer truncatum HOM05D006245 ORTHO05D007260 8.0e-07 58.9 130 40.8
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 1.4e-06 58.2 172 32.6
Atru.chr5.2858 Acer truncatum HOM05D064174 ORTHO05D007260 1.8e-06 57.8 105 41.9
Eucgr.D01601 Eucalyptus grandis HOM05D000005 ORTHO05D011898 3.0e-06 57.0 58 41.4


User provided reference genes

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