Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G120501 Manihot esculenta HOM05D007804 ORTHO05D009828 4.3e-84 314.7 169 100.0
Manes.17G117500 Manihot esculenta HOM05D007804 ORTHO05D009828 1.0e-61 240.4 170 81.2
Manes.15G177500 Manihot esculenta HOM05D007804 ORTHO05D009828 3.9e-32 142.1 167 55.1
CiPaw.03G032600 Carya illinoinensis HOM05D007804 ORTHO05D009828 2.3e-21 106.3 161 44.7
Cfa007487 Carpinus fangiana HOM05D007804 ORTHO05D009828 2.2e-19 99.8 171 42.1
QL02p079311 Quercus lobata HOM05D007804 ORTHO05D009828 1.6e-17 93.6 169 42.6
RcHm_v2.0_Chr2g0169751 Rosa chinensis HOM05D007804 ORTHO05D009828 2.8e-14 82.8 149 42.3
FAN02G3435 Fragaria x ananassa HOM05D007804 ORTHO05D009828 3.6e-14 82.4 167 39.5
Thecc.04G069800 Theobroma cacao HOM05D007804 ORTHO05D009828 3.6e-14 82.4 164 40.9
FAN05G0497 Fragaria x ananassa HOM05D007804 ORTHO05D009828 8.1e-14 81.3 147 41.5
Prupe.3G275600 Prunus persica HOM05D007804 ORTHO05D009828 1.1e-13 80.9 173 40.5
Gohir.D09G022600 Gossypium hirsutum HOM05D007804 ORTHO05D009828 1.4e-13 80.5 154 44.2
COL.COLO4_36996 Corchorus olitorius HOM05D007804 ORTHO05D009828 1.8e-13 80.1 163 41.1
FvH4_6g49720 Fragaria vesca HOM05D007804 ORTHO05D009828 1.8e-13 80.1 167 38.3
FAN14G3729 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.8e-13 80.1 167 38.3
Ciclev10012771m.g Citrus clementina HOM05D007804 ORTHO05D009828 4.0e-13 79.0 164 40.2
Cpa.g.sc14.66 Carica papaya HOM05D007804 ORTHO05D009828 5.2e-13 78.6 162 43.2
Duzib147G0590 Durio zibethinus HOM05D007804 ORTHO05D009828 8.9e-13 77.8 160 41.2
FAN09G3343 Fragaria x ananassa HOM05D007804 ORTHO05D009828 1.2e-12 77.4 166 39.2
Gohir.A09G023300 Gossypium hirsutum HOM05D007804 ORTHO05D009828 7.5e-12 74.7 152 38.2
Medtr6g009320 Medicago truncatula HOM05D007804 ORTHO05D009828 7.5e-12 74.7 167 38.9
Psat1g077320 Pisum sativum HOM05D007804 ORTHO05D009828 1.3e-11 73.9 168 37.5
Gorai.006G026600 Gossypium raimondii HOM05D007804 ORTHO05D009828 3.7e-11 72.4 153 37.9
TWI36G0430 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 4.9e-11 72.0 144 42.4
Lj2g0027470 Lotus japonicus HOM05D007804 ORTHO05D009828 4.1e-10 68.9 161 37.3
Nitab4.5_0002265g0080 Nicotiana tabacum HOM05D007804 ORTHO05D009828 5.4e-10 68.6 155 40.0
Phvul.004G023300 Phaseolus vulgaris HOM05D007804 ORTHO05D009828 7.1e-10 68.2 172 34.3
TPR.G32605 Trifolium pratense HOM05D007804 ORTHO05D009828 1.2e-09 67.4 174 36.2
Glyma.19G017000 Glycine max HOM05D007804 ORTHO05D009828 2.1e-09 66.6 177 35.0
Peaxi162Scf00129g00628 Petunia axillaris HOM05D007804 ORTHO05D009828 3.5e-09 65.9 159 37.7
Sopen02g032190 Solanum pennellii HOM05D007804 ORTHO05D009828 3.5e-09 65.9 160 35.0
ClCG09G018550 Citrullus lanatus HOM05D007804 ORTHO05D009828 6.0e-09 65.1 166 36.1
Lalb_Chr21g0319161 Lupinus albus HOM05D007804 ORTHO05D009828 7.8e-09 64.7 183 35.0
VMungo0464G0276 Vigna mungo HOM05D007804 ORTHO05D009828 1.0e-08 64.3 168 34.5
Nitab4.5_0001239g0070 Nicotiana tabacum HOM05D007804 ORTHO05D009828 1.3e-08 63.9 158 37.3
Solyc02g087440.4 Solanum lycopersicum HOM05D007804 ORTHO05D009828 1.3e-08 63.9 160 36.2
PGSC0003DMG402001401 Solanum tuberosum HOM05D007804 ORTHO05D009828 3.0e-08 62.8 158 36.1
BcaB07g30130 Brassica carinata HOM05D007804 ORTHO05D009828 5.1e-08 62.0 183 38.3
CARHR292560 Cardamine hirsuta HOM05D007804 ORTHO05D009828 8.6e-08 61.2 183 35.5
Aa31LG2G4650 Aethionema arabicum HOM05D007804 ORTHO05D009828 1.1e-07 60.8 161 34.2
BraA06t26974Z Brassica rapa HOM05D007804 ORTHO05D009828 1.1e-07 60.8 180 36.7
Migut.K01348 Erythranthe guttata HOM05D007804 ORTHO05D009828 1.5e-07 60.5 158 36.7
A06p40550 Brassica napus HOM05D007804 ORTHO05D009828 1.9e-07 60.1 180 37.2
BcaC06g30917 Brassica carinata HOM05D007804 ORTHO05D009828 2.5e-07 59.7 159 35.2
TAR622G0153 Trochodendron aralioides HOM05D007804 ORTHO05D009828 2.5e-07 59.7 156 34.6
BcaC03g17515 Brassica carinata HOM05D007804 ORTHO05D009828 3.3e-07 59.3 183 36.6
C02p54770 Brassica napus HOM05D007804 ORTHO05D009828 3.3e-07 59.3 183 36.6
BolC2t11538H Brassica oleracea HOM05D007804 ORTHO05D009828 3.3e-07 59.3 183 36.6
Actinidia02723 Actinidia chinensis HOM05D007804 ORTHO05D009828 4.3e-07 58.9 137 38.0
AT3G28420 Arabidopsis thaliana HOM05D007804 ORTHO05D009828 4.3e-07 58.9 188 34.0
CAN.G206.83 Capsicum annuum HOM05D007804 ORTHO05D009828 4.3e-07 58.9 167 34.1
SGA_v2.0_scaffold135G34801 Striga asiatica HOM05D007804 ORTHO05D009828 4.3e-07 58.9 144 35.4
TWI12G0170 Tripterygium wilfordii HOM05D007804 ORTHO05D009828 5.6e-07 58.5 34 82.4
Sed0002452 Sechium edule HOM05D007804 ORTHO05D009828 7.3e-07 58.2 165 32.7
Glyma.13G067400 Glycine max HOM05D007804 ORTHO05D009828 1.6e-06 57.0 166 33.1
MELO3C021487.2 Cucumis melo HOM05D007804 ORTHO05D009828 2.1e-06 56.6 155 35.5
BcaC06g33740 Brassica carinata HOM05D007804 ORTHO05D009828 2.8e-06 56.2 162 36.4
C07p37470 Brassica napus HOM05D000068 ORTHO05D009828 3.6e-06 55.8 182 34.6
BolC7t44259H Brassica oleracea HOM05D000068 ORTHO05D009828 3.6e-06 55.8 182 34.6
CsaV3_5G037680 Cucumis sativus L. HOM05D007804 ORTHO05D009828 3.6e-06 55.8 166 33.7
Thhalv10004896m.g Eutrema salsugineum HOM05D007804 ORTHO05D009828 6.2e-06 55.1 197 31.0


User provided reference genes

Program Settings