Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 9.4e-113 410.2 209 100.0
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 4.1e-84 315.1 201 80.6
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 1.2e-78 297.0 209 73.2
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.3e-77 293.5 210 70.5
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.1e-76 288.5 210 71.0
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 1.7e-74 283.1 202 72.3
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 6.6e-74 281.2 209 69.9
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 5.6e-73 278.1 211 71.6
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 1.6e-72 276.6 210 69.5
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 2.8e-72 275.8 211 68.7
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 4.7e-72 275.0 216 65.7
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 1.8e-71 273.1 216 65.7
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 3.1e-71 272.3 208 65.4
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 5.2e-71 271.6 211 67.3
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 5.2e-71 271.6 215 66.5
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 6.8e-71 271.2 211 64.9
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 8.9e-71 270.8 232 63.4
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 2.0e-70 269.6 208 64.9
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 4.4e-70 268.5 211 66.8
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 7.5e-70 267.7 208 63.9
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 1.7e-69 266.5 208 64.4
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.1e-68 263.8 211 65.4
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 7.0e-68 261.2 211 64.0
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 2.0e-67 259.6 208 63.5
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 3.5e-67 258.8 210 64.8
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 7.8e-67 257.7 208 63.5
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 1.7e-66 256.5 211 62.6
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 3.0e-66 255.8 210 63.8
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 3.9e-66 255.4 208 63.0
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 3.9e-66 255.4 207 64.3
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 6.6e-66 254.6 211 65.4
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.1e-65 253.8 209 62.2
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.5e-65 253.4 208 61.1
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 1.9e-65 253.1 210 63.8
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 5.6e-65 251.5 213 62.0
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 5.6e-65 251.5 209 65.1
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 7.3e-65 251.1 199 64.8
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 9.5e-65 250.8 209 62.7
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.2e-64 250.4 207 64.7
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.2e-64 250.4 208 62.5
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 3.1e-63 245.7 209 60.8
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 5.2e-63 245.0 213 61.0
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 6.8e-63 244.6 209 59.8
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 8.9e-63 244.2 209 60.3
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 3.4e-62 242.3 223 62.3
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 5.8e-62 241.5 209 61.2
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 7.5e-62 241.1 208 57.7
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.3e-61 240.4 210 56.2
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 2.9e-61 239.2 209 57.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 2.9e-61 239.2 180 65.6
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 4.9e-61 238.4 209 57.4
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 4.9e-61 238.4 205 60.0
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 6.4e-61 238.0 208 61.1
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 8.3e-61 237.7 236 58.1
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 1.4e-60 236.9 177 64.4
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 1.9e-60 236.5 208 59.1
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 3.2e-60 235.7 209 58.4
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 4.1e-60 235.3 195 61.5
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 4.1e-60 235.3 176 64.2
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 4.1e-60 235.3 168 66.7
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 9.2e-60 234.2 182 65.9
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 1.6e-59 233.4 202 61.4
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 2.7e-59 232.6 210 58.6
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 2.7e-59 232.6 184 60.9
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 3.5e-59 232.3 180 63.9
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 4.6e-59 231.9 208 60.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 3.9e-58 228.8 202 60.4
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 6.6e-58 228.0 197 62.4
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 6.6e-58 228.0 197 57.9
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 1.1e-57 227.3 204 55.4
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 4.3e-57 225.3 169 62.7
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 5.6e-57 224.9 221 57.9
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 5.6e-57 224.9 184 60.3
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 2.8e-56 222.6 176 61.9
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 6.2e-56 221.5 212 54.2
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 8.1e-56 221.1 174 62.6
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.1e-55 220.7 212 54.7
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 1.1e-55 220.7 211 56.9
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.4e-55 220.3 210 55.7
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 3.1e-55 219.2 166 66.3
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 5.2e-55 218.4 204 52.9
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 5.2e-55 218.4 205 51.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 6.8e-55 218.0 204 59.8
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 8.9e-55 217.6 211 57.8
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 8.9e-55 217.6 165 66.1
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 8.9e-55 217.6 165 66.1
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 8.9e-55 217.6 165 66.1
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.2e-54 217.2 212 58.5
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 2.0e-54 216.5 209 57.9
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 3.4e-54 215.7 213 56.8
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 4.4e-54 215.3 165 65.5
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 1.7e-53 213.4 166 61.4
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 2.2e-53 213.0 165 64.8
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.7e-53 212.2 201 54.2
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 6.4e-53 211.5 165 63.6
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.1e-52 210.7 213 55.4
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 5.4e-52 208.4 210 51.9
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 3.5e-51 205.7 160 61.9
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 3.5e-51 205.7 229 51.5
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 3.5e-51 205.7 190 55.8
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 1.3e-50 203.8 150 62.7
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 2.8e-48 196.1 208 52.9
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.1e-36 157.5 231 41.6
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 6.0e-35 151.8 208 43.8
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 3.0e-34 149.4 190 43.7
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 5.1e-34 148.7 198 43.4
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 1.1e-33 147.5 193 43.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 5.6e-33 145.2 150 56.7
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.2e-30 137.5 171 48.0
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.7e-29 133.7 249 37.3
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 2.3e-26 123.2 105 63.8
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 4.5e-22 109.0 90 57.8
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 1.3e-21 107.5 185 36.2
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.7e-21 107.1 207 36.2
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.9e-21 105.5 197 35.0
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 3.0e-18 96.3 102 52.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 1.4e-15 87.4 229 30.1
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 5.8e-14 82.0 101 47.5
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 5.0e-13 79.0 130 36.9
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 9.3e-12 74.7 105 40.0
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 8.7e-10 68.2 217 28.1
Sabra04G0096800 Salix brachista HOM05D000546 ORTHO05D000398 1.2e-06 57.8 45 60.0
Cfa020839 Carpinus fangiana HOM05D006662 ORTHO05D008378 3.4e-06 56.2 49 59.2


User provided reference genes

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