Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 0.0e+00 1154.4 667 100.0
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.1e-182 643.3 522 64.6
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 5.0e-168 595.5 636 63.4
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 2.1e-166 590.1 648 61.1
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.8e-165 587.0 664 61.1
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 9.8e-164 581.3 634 61.2
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 9.5e-159 564.7 668 57.9
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 8.0e-158 561.6 636 61.3
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 2.3e-157 560.1 660 59.8
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 3.1e-157 559.7 643 59.4
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 2.2e-155 553.5 664 57.7
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 3.7e-155 552.7 633 60.2
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.9e-154 550.4 650 58.3
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 1.2e-153 547.7 633 58.3
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.7e-152 543.9 665 57.9
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.0e-152 542.3 633 58.3
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 5.0e-152 542.3 637 59.7
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 6.6e-152 542.0 542 69.0
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 4.4e-148 529.3 634 59.0
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 2.2e-147 526.9 762 51.4
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.6e-143 512.3 633 57.8
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.6e-142 510.8 633 56.2
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 6.2e-142 508.8 635 56.1
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.5e-140 504.2 636 57.2
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.0e-140 503.8 658 56.1
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 7.6e-140 501.9 656 54.6
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 9.9e-140 501.5 640 55.8
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 5.1e-136 489.2 636 55.3
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 4.3e-135 486.1 637 56.0
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 3.1e-133 479.9 639 55.9
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 1.2e-132 478.0 637 55.1
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 8.4e-131 471.9 654 55.4
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.3e-128 464.5 546 48.5
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 5.1e-128 462.6 470 51.9
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.5e-127 461.1 528 47.0
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.1e-125 454.9 655 53.4
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 9.0e-125 451.8 655 53.4
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 3.4e-124 449.9 635 54.2
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 6.4e-123 445.7 633 51.0
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.7e-121 440.3 546 46.9
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 1.0e-120 438.3 654 52.1
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.1e-119 434.9 526 47.0
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 5.6e-119 432.6 650 52.5
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 2.1e-118 430.6 677 48.2
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 4.8e-118 429.5 688 50.9
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.0e-117 426.4 673 47.4
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.2e-116 424.9 642 43.0
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 3.4e-116 423.3 540 46.7
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 3.4e-116 423.3 540 46.5
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 3.4e-116 423.3 639 51.0
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 4.5e-116 422.9 545 46.2
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 7.9e-113 412.1 635 51.0
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.3e-112 411.4 579 56.1
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 2.3e-112 410.6 484 48.8
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 3.0e-112 410.2 525 46.1
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 7.4e-111 405.6 635 51.7
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 7.4e-111 405.6 655 50.2
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 2.1e-110 404.1 638 48.9
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 2.8e-110 403.7 634 51.9
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.8e-109 401.0 641 49.8
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 6.9e-109 399.1 637 48.2
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.2e-108 398.3 640 49.7
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.5e-108 397.9 633 51.8
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 2.0e-108 397.5 636 50.6
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.7e-107 394.4 640 49.2
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 1.7e-107 394.4 644 49.8
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 2.9e-107 393.7 634 50.2
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 4.9e-107 392.9 636 47.6
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 4.2e-106 389.8 549 42.3
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 5.5e-106 389.4 639 51.2
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 2.1e-105 387.5 633 51.3
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 4.6e-105 386.3 634 52.1
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.8e-104 384.4 638 51.1
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 2.5e-103 380.6 635 51.8
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 4.3e-103 379.8 633 49.8
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 4.3e-103 379.8 644 50.3
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 2.8e-102 377.1 648 49.2
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 3.7e-102 376.7 637 48.8
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 6.9e-101 372.5 653 47.3
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 6.5e-99 365.9 642 47.2
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 3.9e-96 356.7 659 49.3
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 5.3e-93 346.3 634 45.0
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 1.8e-88 331.3 587 49.2
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 4.8e-86 323.2 579 45.4
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 6.1e-81 306.2 546 46.3
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 2.6e-71 274.2 530 36.2
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 3.7e-70 270.4 432 53.5
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.5e-66 258.5 642 43.0
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.5e-66 256.5 456 53.1
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.1e-61 240.7 215 55.3
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 2.9e-59 234.2 618 36.1
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 9.5e-58 229.2 345 41.2
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 1.7e-54 218.4 635 36.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 4.0e-48 197.2 510 31.6
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 1.5e-47 195.3 415 51.1
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 7.0e-45 186.4 466 32.8
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.0e-41 172.9 175 54.9
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 1.1e-34 152.5 559 28.1
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 8.1e-33 146.4 126 58.7
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 8.3e-30 136.3 298 34.6
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 8.1e-25 119.8 179 38.5
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-24 119.4 228 39.9
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 5.8e-23 113.6 134 50.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 2.3e-19 101.7 164 39.6
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 4.3e-18 97.4 76 65.8
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 8.4e-14 83.2 81 53.1
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.9e-13 82.0 257 29.2
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.2e-13 81.3 46 76.1
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 1.0e-11 76.3 81 49.4


User provided reference genes

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