Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 5.7e-248 860.5 452 100.0
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 2.6e-176 622.5 476 74.2
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 3.4e-152 542.3 492 64.6
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 2.1e-149 533.1 470 64.5
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 3.0e-148 529.3 477 63.9
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 2.5e-147 526.2 471 63.3
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 1.3e-146 523.9 482 64.5
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 1.8e-145 520.0 481 62.4
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 5.8e-144 515.0 503 60.6
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.4e-142 510.4 485 62.5
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 3.2e-142 509.2 481 60.9
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 6.7e-140 501.5 477 61.2
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 3.3e-139 499.2 480 61.0
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 1.6e-138 496.9 489 58.1
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 6.3e-138 495.0 481 60.1
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 2.4e-137 493.0 481 59.9
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 6.9e-137 491.5 493 58.8
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 1.0e-135 487.6 469 59.3
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 6.5e-135 485.0 485 57.7
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 6.5e-135 485.0 485 57.7
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 8.8e-132 474.6 475 58.9
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 1.9e-131 473.4 478 57.7
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 1.9e-131 473.4 482 57.9
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 2.5e-131 473.0 477 58.1
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 4.3e-131 472.2 472 59.3
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.3e-130 470.7 476 58.6
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 4.8e-130 468.8 475 57.5
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 8.2e-130 468.0 465 57.6
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 1.4e-129 467.2 481 57.0
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 1.4e-129 467.2 476 56.1
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 3.1e-129 466.1 469 56.9
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 5.3e-129 465.3 488 57.2
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 9.1e-129 464.5 469 58.0
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 9.1e-129 464.5 467 57.8
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 1.5e-128 463.8 474 56.5
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 2.6e-128 463.0 477 56.6
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 4.5e-128 462.2 466 58.4
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 4.5e-128 462.2 476 57.8
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 5.9e-128 461.8 478 57.5
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 5.9e-128 461.8 478 57.5
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 7.7e-128 461.5 462 54.5
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.0e-127 461.1 471 59.4
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 1.0e-127 461.1 476 57.6
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 1.0e-127 461.1 482 56.6
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 2.9e-127 459.5 515 52.4
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 3.8e-127 459.1 465 56.8
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 5.0e-127 458.8 470 56.2
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 2.5e-126 456.4 467 59.3
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 2.5e-126 456.4 500 55.0
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 2.5e-126 456.4 480 56.9
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 2.5e-126 456.4 484 56.4
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 3.2e-126 456.1 474 58.0
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 4.2e-126 455.7 465 58.3
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 4.2e-126 455.7 439 58.3
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 2.7e-125 453.0 483 56.3
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 3.6e-125 452.6 477 54.5
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 1.0e-124 451.1 460 59.1
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 3.9e-124 449.1 477 55.3
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 2.6e-123 446.4 468 54.1
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 5.7e-123 445.3 470 57.4
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 9.7e-123 444.5 465 55.1
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 9.7e-123 444.5 470 57.4
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 1.7e-122 443.7 478 55.0
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 1.7e-122 443.7 465 55.5
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 3.7e-122 442.6 485 54.6
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 4.8e-122 442.2 479 53.7
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 4.8e-122 442.2 465 54.6
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 6.3e-122 441.8 471 56.1
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 1.4e-121 440.7 487 54.2
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 1.8e-121 440.3 465 54.8
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 3.1e-121 439.5 478 54.6
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 1.5e-120 437.2 466 56.2
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 2.0e-120 436.8 473 53.5
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 2.0e-120 436.8 475 55.6
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 3.4e-120 436.0 501 53.9
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 5.9e-120 435.3 478 54.6
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 3.8e-119 432.6 504 52.8
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 5.0e-119 432.2 494 53.6
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 1.1e-118 431.0 412 63.8
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 3.2e-118 429.5 477 53.5
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 8.0e-117 424.9 476 54.2
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 1.5e-115 420.6 473 54.5
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 2.0e-115 420.2 471 52.4
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 4.4e-115 419.1 477 52.0
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 2.8e-114 416.4 470 53.2
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 4.8e-114 415.6 470 53.4
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 8.2e-114 414.8 474 52.7
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 1.4e-113 414.1 426 58.7
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 1.8e-113 413.7 399 61.4
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 3.8e-111 406.0 511 49.1
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 7.2e-110 401.7 476 51.7
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 1.2e-109 401.0 480 49.4
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 4.7e-109 399.1 431 57.1
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 2.0e-107 393.7 471 49.7
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 3.3e-107 392.9 475 49.5
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.7e-106 390.6 406 58.9
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 9.1e-105 384.8 410 57.6
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 7.7e-104 381.7 472 49.8
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 3.8e-103 379.4 479 47.8
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 1.2e-99 367.9 495 47.9
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 1.7e-98 364.0 476 47.9
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 1.9e-94 350.5 473 46.1
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 2.7e-88 330.1 484 46.5
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 2.5e-86 323.6 298 59.4
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 1.3e-82 311.2 378 48.4
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 1.7e-74 284.3 462 42.4
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 9.2e-73 278.5 312 51.6
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 6.2e-69 265.8 463 39.1
GSVIVG01011678001 Vitis vinifera HOM05D006041 ORTHO05D007473 9.9e-67 258.5 187 73.3
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 3.5e-64 250.0 299 51.8
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 1.3e-63 248.1 389 42.7
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 3.3e-62 243.4 302 49.3
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 3.1e-60 236.9 468 38.2
SGA_v2.0_scaffold151G36757 Striga asiatica HOM05D006041 ORTHO05D007473 1.2e-56 224.9 221 58.4
Aa31LG3G2990 Aethionema arabicum HOM05D006041 ORTHO05D007473 3.5e-56 223.4 228 58.3
HPP92_009644 Vanilla planifolia HOM05D006041 ORTHO05D007473 1.9e-54 217.6 237 50.2
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 1.6e-48 198.0 337 38.6
Os09g0401600 Oryza sativa ssp. japonica HOM05D006041 ORTHO05D007473 1.1e-46 191.8 222 50.0
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 7.3e-46 189.1 305 41.3
Aa31sc215G20 Aethionema arabicum HOM05D006041 ORTHO05D007473 7.4e-38 162.5 147 64.6
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 6.2e-37 159.5 322 34.8
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 9.3e-33 145.6 234 42.3
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 4.3e-30 136.7 283 35.3
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 2.7e-24 117.5 180 48.3
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 1.5e-22 111.7 136 44.9
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 2.8e-21 107.5 185 38.9
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 2.7e-16 90.9 110 54.5
SMO276G0024 Selaginella moellendorffii HOM05D006041 ORTHO05D007473 7.4e-14 82.8 94 47.9
Actinidia34031 Actinidia chinensis HOM05D006041 ORTHO05D007473 9.1e-12 75.9 72 56.9
MCO04G546 Micromonas commoda HOM05D006041 ORTHO05D007473 2.0e-11 74.7 239 27.2
COL.COLO4_15646 Corchorus olitorius HOM05D002747 ORTHO05D003069 3.9e-07 60.5 73 46.6
GSVIVG01003278001 Vitis vinifera HOM05D002747 ORTHO05D003069 4.4e-06 57.0 54 46.3
TWI18G0343 Tripterygium wilfordii HOM05D002747 ORTHO05D003069 5.7e-06 56.6 57 49.1


User provided reference genes

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