Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 0.0e+00 1646.7 861 100.0
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 0.0e+00 1174.1 867 73.4
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 0.0e+00 1169.8 864 72.1
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 0.0e+00 1090.9 773 74.3
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 0.0e+00 1079.7 867 67.9
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 0.0e+00 1076.2 872 67.5
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 2.9e-311 1071.6 865 66.9
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 3.5e-307 1058.1 925 64.2
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 9.6e-305 1050.0 870 65.4
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 2.8e-304 1048.5 868 66.9
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.1e-303 1045.0 867 64.7
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 4.0e-303 1044.6 870 64.8
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 4.0e-303 1044.6 777 70.0
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 2.6e-302 1042.0 863 66.0
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 6.0e-299 1030.8 870 64.4
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 9.0e-295 1016.9 871 64.4
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 1.0e-293 1013.4 839 66.0
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 1.3e-293 1013.1 871 62.9
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.7e-293 1012.7 868 64.2
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 4.6e-291 1004.6 753 69.2
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.3e-289 998.4 881 62.9
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 4.3e-289 998.0 868 63.1
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 4.1e-287 991.5 808 66.6
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 3.2e-284 981.9 900 60.9
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.2e-284 980.7 770 68.1
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 1.6e-283 979.5 871 61.4
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 2.3e-282 975.7 866 61.8
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 3.0e-282 975.3 868 62.6
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.5e-278 963.0 867 62.2
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.3e-277 959.9 820 64.6
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.2e-276 954.9 864 60.1
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 2.7e-275 952.2 806 64.8
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 3.9e-274 948.3 864 61.3
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 6.7e-274 947.6 817 63.4
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 5.7e-273 944.5 773 65.1
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 1.7e-269 932.9 866 59.1
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.2e-268 928.7 769 64.8
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 3.6e-267 925.2 720 67.9
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 2.8e-264 915.6 800 63.0
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 7.7e-262 907.5 863 59.2
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 2.2e-261 906.0 854 57.0
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.2e-260 902.1 857 57.1
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 7.2e-260 901.0 770 64.0
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.2e-259 900.2 865 56.4
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.8e-258 896.3 800 61.0
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.7e-257 890.6 867 58.8
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 4.8e-256 888.3 769 60.1
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 1.4e-255 886.7 862 55.3
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 2.0e-254 882.9 870 57.7
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 5.5e-252 874.8 808 59.3
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 1.8e-250 869.8 781 62.1
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 1.8e-250 869.8 770 62.7
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 5.7e-249 864.8 838 56.3
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.8e-248 862.4 822 58.2
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 8.3e-248 860.9 759 61.9
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 2.4e-247 859.4 861 54.9
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 9.1e-247 857.4 757 62.2
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 9.1e-247 857.4 773 59.8
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 1.6e-246 856.7 822 57.1
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.3e-245 853.6 773 60.9
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 8.6e-245 850.9 700 64.4
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 1.5e-244 850.1 874 55.0
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 5.5e-244 848.2 841 56.5
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.2e-243 847.0 906 55.6
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.6e-243 846.7 918 52.7
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 8.0e-243 844.3 848 55.7
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 3.0e-242 842.4 877 56.3
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 3.0e-242 842.4 797 57.3
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 3.0e-242 842.4 860 55.3
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.0e-242 842.4 822 56.4
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.6e-241 839.3 804 59.2
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 7.5e-241 837.8 841 56.2
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 1.3e-240 837.0 846 54.3
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.7e-240 836.6 846 54.3
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 2.8e-240 835.9 844 53.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 9.2e-239 830.9 758 59.1
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.6e-238 830.1 770 59.7
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 7.8e-238 827.8 826 56.9
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.0e-237 827.4 849 54.3
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 1.5e-236 823.5 849 54.9
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.0e-230 803.1 806 55.5
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 1.2e-225 787.3 758 57.5
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.6e-211 740.3 864 49.5
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 9.3e-207 724.5 804 51.5
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 2.7e-206 723.0 750 53.1
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 6.4e-200 701.8 792 47.7
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 4.9e-192 675.6 584 63.0
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 6.2e-187 658.7 875 48.1
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.9e-186 655.2 491 69.7
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-185 654.4 860 45.9
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 3.5e-182 642.9 599 59.3
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 7.6e-177 625.2 759 49.1
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 7.9e-174 615.1 599 57.6
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.9e-172 610.5 603 57.7
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 4.1e-170 602.8 570 58.9
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 1.4e-167 594.3 449 68.2
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 8.8e-165 585.1 636 52.8
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.3e-157 560.5 589 55.0
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.7e-152 544.3 496 58.9
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 6.5e-152 542.3 496 58.5
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 1.2e-134 485.0 871 40.0
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 7.5e-116 422.5 820 34.1
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 9.9e-100 369.0 793 35.3
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.4e-93 348.6 277 67.1
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 4.3e-87 327.0 366 47.3
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 3.2e-82 310.8 282 61.0
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.5e-79 302.0 309 56.3
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.4e-77 294.7 621 33.8
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.6e-73 282.0 207 68.1
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 3.5e-73 280.8 280 55.4
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 6.2e-70 270.0 267 56.9
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 6.0e-65 253.4 872 29.1
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 8.2e-54 216.5 853 24.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.7e-27 129.0 156 48.1
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.5e-20 104.8 145 44.8
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 2.6e-15 88.6 110 49.1
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 3.7e-14 84.7 93 54.8
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 1.8e-13 82.4 68 58.8
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 5.0e-11 74.3 125 39.2
SEGI_29821 Sequoiadendron giganteum HOM05D000716 ORTHO05D004822 3.4e-07 61.6 196 26.5
Lalb_Chr23g0268271 Lupinus albus HOM05D002086 ORTHO05D004968 2.9e-06 58.5 298 22.5


User provided reference genes

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