Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G079666 Manihot esculenta HOM05D000002 ORTHO05D010521 6.4e-44 180.3 85 100.0
Manes.06G038551 Manihot esculenta HOM05D000002 ORTHO05D001544 4.9e-36 154.1 107 72.9
Manes.02G206750 Manihot esculenta HOM05D000002 ORTHO05D001544 1.3e-33 146.0 107 70.1
Manes.05G117018 Manihot esculenta HOM05D000002 ORTHO05D001544 3.9e-33 144.4 85 84.7
Manes.01G061550 Manihot esculenta HOM05D000002 ORTHO05D001544 1.5e-32 142.5 103 69.9
Manes.17G026082 Manihot esculenta HOM05D000002 ORTHO05D001544 2.5e-32 141.7 107 68.2
Manes.09G072919 Manihot esculenta HOM05D000002 ORTHO05D001544 2.1e-31 138.7 107 66.4
Manes.18G145866 Manihot esculenta HOM05D000002 ORTHO05D010521 4.0e-30 134.4 86 77.9
Manes.12G098649 Manihot esculenta HOM05D000002 ORTHO05D010521 9.9e-29 129.8 96 70.8
Manes.16G054725 Manihot esculenta HOM05D000002 ORTHO05D001544 3.8e-28 127.9 86 75.6
Manes.17G026099 Manihot esculenta HOM05D000002 ORTHO05D001544 2.4e-27 125.2 100 68.0
Manes.18G144104 Manihot esculenta HOM05D000002 ORTHO05D001544 3.9e-25 117.9 87 70.1
Manes.17G001425 Manihot esculenta HOM05D000002 ORTHO05D010521 9.6e-24 113.2 85 69.4
Manes.18G145651 Manihot esculenta HOM05D000002 ORTHO05D001544 1.4e-22 109.4 88 64.8
Manes.15G192930 Manihot esculenta HOM05D000002 ORTHO05D010521 2.6e-21 105.1 89 64.0
Manes.08G076237 Manihot esculenta HOM05D008076 ORTHO05D010521 2.3e-17 92.0 72 63.9
Manes.08G069850 Manihot esculenta HOM05D008076 ORTHO05D010521 6.7e-17 90.5 68 66.2
Manes.06G022851 Manihot esculenta HOM05D000002 ORTHO05D010521 9.7e-16 86.7 52 82.7
Manes.01G000217 Manihot esculenta HOM05D000002 ORTHO05D010521 3.7e-15 84.7 74 63.5
Manes.18G122902 Manihot esculenta HOM05D000002 ORTHO05D001544 1.4e-14 82.8 47 89.4
SHI35727 Sapria himalayana HOM05D000002 ORTHO05D001544 3.1e-14 81.6 98 49.0
SHI46719 Sapria himalayana HOM05D000002 ORTHO05D001544 3.1e-14 81.6 98 49.0
SHI26748 Sapria himalayana HOM05D000002 ORTHO05D001544 6.9e-14 80.5 104 44.2
SHI15516 Sapria himalayana HOM05D000002 ORTHO05D001544 1.5e-13 79.3 107 47.7
Manes.18G141045 Manihot esculenta HOM05D000002 ORTHO05D001544 1.0e-12 76.6 85 51.8
SHI24155 Sapria himalayana HOM05D000002 ORTHO05D001544 2.9e-12 75.1 99 44.4
SHI09750 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-12 73.6 93 47.3
SHI11803 Sapria himalayana HOM05D000002 ORTHO05D010521 8.5e-12 73.6 87 50.6
Manes.18G144108 Manihot esculenta HOM05D000002 ORTHO05D001544 3.2e-11 71.6 46 78.3
Manes.17G035197 Manihot esculenta HOM05D000002 ORTHO05D001544 1.6e-10 69.3 53 67.9
THA.LOC104803408 Tarenaya hassleriana HOM05D000002 ORTHO05D001544 1.6e-10 69.3 96 38.5
HanXRQChr11g0327471 Helianthus annuus HOM05D000002 ORTHO05D000001 4.6e-10 67.8 106 40.6
HanXRQChr03g0088901 Helianthus annuus HOM05D000002 ORTHO05D001544 6.1e-10 67.4 106 40.6
HanXRQChr04g0115101 Helianthus annuus HOM05D000002 ORTHO05D001544 6.1e-10 67.4 106 40.6
SHI26311 Sapria himalayana HOM05D000002 ORTHO05D010521 6.1e-10 67.4 96 43.8
ECA234G1927 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-09 66.2 112 40.2
ECA238G1432 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-09 65.9 113 36.3
HanXRQChr06g0164281 Helianthus annuus HOM05D000002 ORTHO05D001544 1.8e-09 65.9 98 41.8
HanXRQChr11g0329461 Helianthus annuus HOM05D000002 ORTHO05D001544 1.8e-09 65.9 98 41.8
HanXRQChr12g0375451 Helianthus annuus HOM05D000002 ORTHO05D001544 1.8e-09 65.9 98 41.8
HanXRQChr15g0494961 Helianthus annuus HOM05D000002 ORTHO05D001544 1.8e-09 65.9 98 41.8
ECA232G4978 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-09 65.5 113 37.2
HanXRQChr01g0025071 Helianthus annuus HOM05D000002 ORTHO05D001544 2.3e-09 65.5 97 42.3
HanXRQChr02g0036901 Helianthus annuus HOM05D000002 ORTHO05D001544 3.0e-09 65.1 98 41.8
ECA246G3924 Erigeron canadensis HOM05D000002 ORTHO05D001544 5.1e-09 64.3 113 36.3
SHI07408 Sapria himalayana HOM05D000002 ORTHO05D001544 1.1e-08 63.2 102 37.3
SHI17833 Sapria himalayana HOM05D000002 ORTHO05D001544 1.1e-08 63.2 106 39.6
ECA248G1621 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-08 62.8 113 36.3
SHI13106 Sapria himalayana HOM05D001098 ORTHO05D002527 1.5e-08 62.8 99 43.4
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 1.9e-08 62.4 92 41.3
Sabra13G0091600 Salix brachista HOM05D000002 ORTHO05D001544 1.9e-08 62.4 92 41.3
SHI17392 Sapria himalayana HOM05D000002 ORTHO05D001544 1.9e-08 62.4 103 39.8
ECA233G0399 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.5e-08 62.0 104 36.5
ECA248G1200 Erigeron canadensis HOM05D000002 ORTHO05D001544 2.5e-08 62.0 111 37.8
ECA233G1034 Erigeron canadensis HOM05D000002 ORTHO05D001544 3.3e-08 61.6 104 35.6
ECA240G4766 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-08 61.6 113 35.4
ECA247G2276 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-08 61.6 104 35.6
ECA248G1189 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-08 61.6 104 35.6
Sabra02G0093900 Salix brachista HOM05D000002 ORTHO05D001544 3.3e-08 61.6 102 39.2
Sabra10G0050700 Salix brachista HOM05D000002 ORTHO05D001544 3.3e-08 61.6 92 41.3
Sabra18G0125600 Salix brachista HOM05D000002 ORTHO05D001544 3.3e-08 61.6 102 39.2
ECA232G3098 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA232G4270 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA233G1311 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.3e-08 61.2 113 35.4
ECA233G1490 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA233G5329 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA234G0487 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA234G1360 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA234G4291 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA234G4634 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA240G0275 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA240G0584 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.3e-08 61.2 113 35.4
ECA240G3008 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA240G4019 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA246G0033 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA247G0962 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA248G2941 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.3e-08 61.2 113 35.4
ECA232G0182 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-08 60.8 113 35.4
ECA232G4563 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.7e-08 60.8 113 35.4
ECA246G3038 Erigeron canadensis HOM05D000002 ORTHO05D001544 5.7e-08 60.8 113 35.4
Sabra11G0023000 Salix brachista HOM05D000002 ORTHO05D001544 5.7e-08 60.8 102 39.2
Sabra15G0127600 Salix brachista HOM05D000002 ORTHO05D001544 5.7e-08 60.8 102 39.2
SHI12056 Sapria himalayana HOM05D000002 ORTHO05D014652 5.7e-08 60.8 34 70.6
ECA111G0001 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-08 60.5 113 35.4
ECA238G2637 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-08 60.5 109 35.8
ECA240G2127 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-08 60.5 104 37.5
ECA246G5251 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.4e-08 60.5 113 35.4
ECA236G0744 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-08 60.1 113 35.4
ECA236G3009 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-08 60.1 113 34.5
ECA240G4648 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.7e-08 60.1 112 38.4
Sabra05G0136100 Salix brachista HOM05D000002 ORTHO05D001544 9.7e-08 60.1 92 40.2
ECA195G0003 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.3e-07 59.7 113 34.5
ECA246G1170 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.7e-07 59.3 113 34.5
ECA247G0542 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.7e-07 59.3 83 42.2
SHI28699 Sapria himalayana HOM05D000002 ORTHO05D010521 1.7e-07 59.3 33 72.7
SHI34117 Sapria himalayana HOM05D000002 ORTHO05D001544 1.7e-07 59.3 103 43.7
ECA232G4257 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-07 58.9 113 38.1
SHI04365 Sapria himalayana HOM05D000002 ORTHO05D001544 2.2e-07 58.9 47 61.7
SHI17186 Sapria himalayana HOM05D000002 ORTHO05D001544 2.2e-07 58.9 92 40.2
ECA240G4345 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-07 58.2 113 33.6
SHI22185 Sapria himalayana HOM05D000002 ORTHO05D014652 3.7e-07 58.2 43 60.5
ECA247G3123 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-07 57.8 89 39.3
Sabra16G0242800 Salix brachista HOM05D000002 ORTHO05D001544 6.3e-07 57.4 102 38.2
SHI16195 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 56.6 39 64.1
SHI34110 Sapria himalayana HOM05D000002 ORTHO05D001544 1.1e-06 56.6 97 37.1
ECA240G1948 Erigeron canadensis HOM05D000014 ORTHO05D000093 1.8e-06 55.8 110 36.4
ECA240G2407 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 109 32.1
ECA248G2029 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 87 40.2
ECA248G3129 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 113 36.3
PGR042G1292 Punica granatum HOM05D000002 ORTHO05D001544 1.8e-06 55.8 95 38.9
SHI13170 Sapria himalayana HOM05D000002 ORTHO05D001544 1.8e-06 55.8 100 39.0
Ciclev10033628m.g Citrus clementina HOM05D000002 ORTHO05D001544 2.4e-06 55.5 90 41.1
ECA232G2406 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 55.1 113 34.5
ECA234G4775 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 55.1 88 42.0
ECA246G1853 Erigeron canadensis HOM05D000002 ORTHO05D001544 3.1e-06 55.1 70 45.7
ECA234G2681 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 54.7 113 36.3
ECA248G2339 Erigeron canadensis HOM05D000002 ORTHO05D001544 4.1e-06 54.7 110 34.5
Gorai.010G113500 Gossypium raimondii HOM05D000002 ORTHO05D001544 4.1e-06 54.7 84 38.1
SHI20100 Sapria himalayana HOM05D023977 ORTHO05D001544 4.1e-06 54.7 84 41.7
Ciclev10006890m.g Citrus clementina HOM05D000002 ORTHO05D001544 5.3e-06 54.3 90 41.1
SHI00193 Sapria himalayana HOM05D008076 ORTHO05D010521 5.3e-06 54.3 37 62.2
ECA238G1262 Erigeron canadensis HOM05D000711 ORTHO05D000545 6.9e-06 53.9 77 40.3
ECA247G0958 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 53.9 96 37.5
SHI02006 Sapria himalayana HOM05D000002 ORTHO05D001544 6.9e-06 53.9 100 39.0
SHI10736 Sapria himalayana HOM05D000002 ORTHO05D001544 6.9e-06 53.9 56 57.1
ECA233G1487 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 53.5 113 34.5
ECA240G4607 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 53.5 113 33.6
ECA246G3835 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 53.5 105 37.1
ECA248G0736 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.1e-06 53.5 110 38.2
SHI51043 Sapria himalayana HOM05D008076 ORTHO05D010521 9.1e-06 53.5 85 41.2


User provided reference genes

Program Settings