Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 3.1e-60 235.0 119 100.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 5.1e-47 191.0 113 85.0
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 4.8e-45 184.5 100 89.0
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.8e-45 184.5 111 81.1
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.1e-44 183.3 111 82.0
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.4e-44 183.0 110 80.9
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.0e-44 181.4 110 80.0
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 5.8e-43 177.6 103 82.5
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 7.6e-43 177.2 118 76.3
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 7.6e-43 177.2 111 80.2
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.7e-42 176.0 116 75.9
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.7e-42 176.0 109 80.7
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.8e-42 174.9 116 75.0
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 3.8e-42 174.9 118 76.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 4.9e-42 174.5 114 75.4
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 4.9e-42 174.5 114 75.4
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 6.4e-42 174.1 115 75.7
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 6.4e-42 174.1 99 84.8
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.1e-41 173.3 114 78.1
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.4e-41 172.9 119 72.3
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.4e-41 172.9 100 83.0
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.9e-41 172.6 119 73.9
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.9e-41 172.6 113 76.1
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 2.4e-41 172.2 102 81.4
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 3.2e-41 171.8 115 77.4
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 3.2e-41 171.8 116 74.1
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 4.2e-41 171.4 115 76.5
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 4.2e-41 171.4 104 83.7
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 4.2e-41 171.4 119 73.9
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 7.1e-41 170.6 114 75.4
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 7.1e-41 170.6 119 73.1
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.2e-40 169.9 119 71.4
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-40 169.9 114 73.7
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-40 169.5 114 73.7
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-40 169.5 114 73.7
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.6e-40 169.5 100 81.0
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.1e-40 169.1 108 77.8
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.1e-40 169.1 114 73.7
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.1e-40 169.1 114 73.7
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.1e-40 169.1 108 77.8
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 2.1e-40 169.1 116 74.1
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.7e-40 168.7 111 77.5
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 2.7e-40 168.7 96 85.4
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.7e-40 168.7 102 82.4
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 7.9e-40 167.2 101 80.2
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 1.0e-39 166.8 112 73.2
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.0e-39 166.8 93 84.9
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 1.3e-39 166.4 116 69.8
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.3e-39 166.4 115 72.2
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.8e-39 166.0 107 73.8
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.8e-39 166.0 99 79.8
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.8e-39 166.0 116 71.6
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 2.3e-39 165.6 108 75.0
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 2.3e-39 165.6 108 75.0
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 2.3e-39 165.6 108 75.0
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 3.0e-39 165.2 113 72.6
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 3.9e-39 164.9 116 69.8
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 6.7e-39 164.1 114 73.7
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 6.7e-39 164.1 111 73.0
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 6.7e-39 164.1 98 75.5
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.1e-38 163.3 110 71.8
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 1.1e-38 163.3 111 73.0
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 1.5e-38 162.9 116 71.6
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 4.3e-38 161.4 111 72.1
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 5.6e-38 161.0 102 76.5
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 9.6e-38 160.2 120 67.5
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 1.3e-37 159.8 102 75.5
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 1.3e-37 159.8 100 77.0
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.8e-37 158.7 102 74.5
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 6.2e-37 157.5 114 67.5
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.4e-36 156.4 102 71.6
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 1.8e-36 156.0 102 74.5
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 2.4e-36 155.6 102 74.5
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 4.0e-36 154.8 117 64.1
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 6.9e-36 154.1 87 81.6
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 9.0e-36 153.7 109 68.8
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 9.0e-36 153.7 100 71.0
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.5e-35 152.9 93 79.6
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.5e-35 152.9 107 70.1
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.0e-34 150.2 76 90.8
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 1.3e-34 149.8 104 67.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 4.9e-34 147.9 115 67.8
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 6.5e-34 147.5 117 62.4
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.1e-33 146.7 96 70.8
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.4e-33 146.4 113 60.2
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.5e-33 145.6 73 90.4
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.5e-32 141.7 102 69.6
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 7.9e-32 140.6 76 84.2
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.3e-31 139.8 77 83.1
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.8e-31 139.4 110 60.9
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.5e-30 135.6 90 68.9
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 7.4e-30 134.0 100 65.0
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 7.4e-30 134.0 93 68.8
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 9.6e-30 133.7 96 69.8
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 9.6e-30 133.7 103 64.1
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 2.1e-29 132.5 79 75.9
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 2.8e-29 132.1 84 73.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.4e-28 129.8 88 73.9
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.4e-28 129.8 76 80.3
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.7e-24 115.5 133 44.4
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 2.7e-24 115.5 98 59.2
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.3e-23 113.2 98 51.0
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 1.8e-20 102.8 96 51.0
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.0e-18 97.1 76 57.9
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 2.5e-17 92.4 55 78.2
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.0e-14 82.8 115 37.4
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 4.5e-11 71.6 92 43.5


User provided reference genes

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