Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 1.3e-143 513.1 263 100.0
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 3.4e-67 259.2 255 56.1
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 1.8e-65 253.4 260 53.5
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 6.6e-63 245.0 246 55.7
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 5.2e-60 235.3 260 50.8
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 5.2e-60 235.3 246 53.7
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 2.6e-59 233.0 245 55.5
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 2.6e-59 233.0 252 51.2
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 4.9e-58 228.8 263 48.3
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 1.8e-57 226.9 249 51.8
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 1.6e-56 223.8 242 51.7
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 2.3e-55 219.9 255 49.8
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.1e-54 217.6 235 51.9
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 1.8e-52 210.3 241 49.0
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 3.1e-52 209.5 230 50.9
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 8.9e-52 208.0 241 49.8
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 1.5e-51 207.2 195 57.4
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 4.4e-51 205.7 235 50.2
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 8.3e-50 201.4 242 51.2
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 1.4e-49 200.7 241 49.0
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 2.4e-49 199.9 246 46.3
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 7.0e-49 198.4 250 48.8
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 9.2e-49 198.0 232 50.9
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 5.6e-46 188.7 242 44.6
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 5.6e-46 188.7 230 50.4
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 6.8e-44 181.8 276 38.4
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 1.2e-43 181.0 195 51.8
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 3.4e-43 179.5 266 39.8
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 5.8e-43 178.7 209 44.5
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 7.5e-43 178.3 284 38.0
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 9.9e-43 177.9 214 44.9
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 9.9e-43 177.9 271 44.3
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 1.1e-41 174.5 169 59.2
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 4.1e-41 172.6 277 38.3
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 5.4e-41 172.2 275 38.2
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 5.4e-41 172.2 275 38.2
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 7.1e-41 171.8 243 42.0
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 3.5e-40 169.5 243 41.6
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.5e-40 169.5 239 40.2
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 6.0e-40 168.7 196 45.9
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 2.3e-39 166.8 258 38.0
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.0e-39 166.4 243 40.7
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 5.1e-39 165.6 263 38.4
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 6.6e-39 165.2 266 38.0
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 6.6e-39 165.2 263 38.0
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 6.6e-39 165.2 247 38.9
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 6.6e-39 165.2 236 43.6
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.4e-36 157.5 213 45.1
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 3.1e-36 156.4 200 45.0
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 2.6e-35 153.3 264 36.7
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 2.6e-35 153.3 193 47.2
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 5.8e-35 152.1 203 43.3
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 9.9e-35 151.4 203 42.9
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 1.3e-34 151.0 211 42.7
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 8.4e-34 148.3 126 62.7
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.1e-33 147.9 263 35.0
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 1.4e-33 147.5 243 39.5
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 2.4e-33 146.7 241 38.6
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 5.4e-33 145.6 221 39.4
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 7.1e-33 145.2 237 40.5
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 7.1e-33 145.2 210 43.8
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 1.7e-31 140.6 196 43.4
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 3.9e-31 139.4 333 34.8
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 5.6e-30 135.6 126 57.9
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 1.2e-29 134.4 209 39.2
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 5.2e-28 129.0 139 48.9
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 9.0e-28 128.3 243 35.8
CANSAT35G0336 Cannabis sativa HOM05D007839 ORTHO05D009924 2.0e-27 127.1 254 37.0
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 2.6e-27 126.7 120 55.8
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 3.8e-26 122.9 183 44.3
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 1.4e-25 120.9 132 48.5
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 1.0e-23 114.8 176 42.6
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.7e-23 114.0 155 49.0
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 2.8e-21 106.7 238 32.8
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.8e-18 96.3 136 41.9
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 5.4e-17 92.4 216 31.5
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 1.6e-16 90.9 135 40.7
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 5.1e-15 85.9 134 35.8
CANSAT35G1906 Cannabis sativa HOM05D007839 ORTHO05D009924 1.5e-14 84.3 247 29.1
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 2.1e-13 80.5 116 40.5
ATR1091G114 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.8e-13 80.1 125 40.0
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 3.7e-13 79.7 113 45.1
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 4.8e-13 79.3 103 41.7
Atru.chr10.1227 Acer truncatum HOM05D008587 ORTHO05D010485 4.5e-11 72.8 128 43.0
Cpa.g.sc166.5 Carica papaya HOM05D008587 ORTHO05D010485 2.2e-10 70.5 109 40.4
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 2.2e-10 70.5 118 41.5
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 8.4e-10 68.6 125 39.2
Potri.004G064900 Populus trichocarpa HOM05D008587 ORTHO05D010485 1.1e-09 68.2 207 30.4
Sabra04G0043200 Salix brachista HOM05D008587 ORTHO05D010485 2.1e-08 63.9 206 30.1
TWI73G0910 Tripterygium wilfordii HOM05D008587 ORTHO05D010485 6.0e-08 62.4 127 29.9
Cfa000946 Carpinus fangiana HOM05D008587 ORTHO05D010485 1.8e-07 60.8 118 35.6
FvH4_3g05550 Fragaria vesca HOM05D014465 ORTHO05D010485 1.8e-07 60.8 106 40.6
Sp4g16800 Schrenkiella parvula HOM05D008587 ORTHO05D010485 3.0e-07 60.1 115 37.4
AL4G30510 Arabidopsis lyrata HOM05D008587 ORTHO05D010485 5.1e-07 59.3 115 37.4
BcaC02g11516 Brassica carinata HOM05D008587 ORTHO05D010485 5.1e-07 59.3 115 38.3
C04p14490 Brassica napus HOM05D008587 ORTHO05D010485 5.1e-07 59.3 115 38.3
BolC4t23032H Brassica oleracea HOM05D008587 ORTHO05D010485 5.1e-07 59.3 115 38.3
FAN11G1722 Fragaria x ananassa HOM05D014465 ORTHO05D010485 5.1e-07 59.3 104 40.4
FAN16G1258 Fragaria x ananassa HOM05D014465 ORTHO05D010485 5.1e-07 59.3 104 39.4
THA.LOC104814298 Tarenaya hassleriana HOM05D008587 ORTHO05D010485 5.1e-07 59.3 109 39.4
Thhalv10017034m.g Eutrema salsugineum HOM05D008587 ORTHO05D010485 6.7e-07 58.9 104 36.5
A05p11130 Brassica napus HOM05D008587 ORTHO05D010485 8.7e-07 58.5 115 38.3
BraA05t20060Z Brassica rapa HOM05D008587 ORTHO05D010485 8.7e-07 58.5 115 38.3
Carub.0004s1621 Capsella rubella HOM05D008587 ORTHO05D010485 1.1e-06 58.2 115 36.5
Cfa000945 Carpinus fangiana HOM05D008587 ORTHO05D010485 1.1e-06 58.2 114 31.6
AT2G34540 Arabidopsis thaliana HOM05D008587 ORTHO05D010485 1.5e-06 57.8 115 36.5
BcaB02g09532 Brassica carinata HOM05D008587 ORTHO05D010485 1.9e-06 57.4 115 37.4
QL05p058118 Quercus lobata HOM05D008587 ORTHO05D010485 2.5e-06 57.0 110 36.4
QL05p058149 Quercus lobata HOM05D008587 ORTHO05D010485 2.5e-06 57.0 150 34.7
Prupe.4G080600 Prunus persica HOM05D008587 ORTHO05D010485 3.3e-06 56.6 127 36.2
VMungo0540G1711 Vigna mungo HOM05D007839 ORTHO05D009924 4.3e-06 56.2 162 32.7
CANSAT35G0142 Cannabis sativa HOM05D008587 ORTHO05D010485 5.6e-06 55.8 92 37.0
Aa31LG10G6860 Aethionema arabicum HOM05D008587 ORTHO05D010485 9.6e-06 55.1 115 34.8


User provided reference genes

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