Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 3.8e-109 398.3 215 100.0
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 1.2e-70 270.4 199 68.3
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 3.8e-69 265.4 197 68.0
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 9.2e-63 244.2 196 61.2
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 3.5e-62 242.3 195 59.5
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 2.3e-61 239.6 181 61.9
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.5e-60 236.9 174 63.2
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 1.6e-59 233.4 190 61.1
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 6.1e-59 231.5 178 61.2
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 6.1e-59 231.5 178 61.2
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 8.0e-59 231.1 188 59.0
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 3.0e-58 229.2 189 59.3
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 3.0e-58 229.2 173 61.3
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 1.2e-57 227.3 180 59.4
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 1.5e-57 226.9 189 59.8
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 2.0e-57 226.5 186 60.8
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 2.6e-57 226.1 180 62.2
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 4.4e-57 225.3 175 59.4
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 5.7e-57 224.9 176 60.8
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 7.5e-57 224.6 219 56.2
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 7.5e-57 224.6 192 59.9
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 1.3e-56 223.8 180 63.3
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 1.3e-56 223.8 187 60.4
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 1.3e-56 223.8 185 58.4
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 2.9e-56 222.6 187 58.3
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 3.7e-56 222.2 193 57.5
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 6.4e-56 221.5 188 56.9
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 1.8e-55 219.9 187 60.4
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 1.2e-54 217.2 192 57.8
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 1.2e-54 217.2 190 54.7
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 3.5e-54 215.7 189 60.8
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 5.9e-54 214.9 186 53.8
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 7.8e-54 214.5 187 61.0
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 1.0e-53 214.2 187 61.0
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 1.3e-53 213.8 185 56.2
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 1.1e-52 210.7 179 57.5
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 1.9e-52 209.9 183 57.4
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 5.6e-52 208.4 212 49.1
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 7.3e-52 208.0 210 49.0
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 9.5e-52 207.6 211 50.2
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.2e-51 207.2 186 55.4
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.2e-51 207.2 186 55.4
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 4.7e-51 205.3 181 55.2
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 1.0e-50 204.1 176 56.2
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 2.3e-50 203.0 212 49.5
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 8.9e-50 201.1 186 54.3
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 8.9e-50 201.1 194 52.6
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 4.4e-49 198.7 186 55.4
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 4.4e-49 198.7 213 48.8
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 5.8e-49 198.4 162 57.4
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 7.5e-49 198.0 198 48.0
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 1.3e-48 197.2 184 53.3
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 1.3e-48 197.2 194 53.1
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 3.7e-48 195.7 181 55.2
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 6.4e-48 194.9 187 54.0
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 6.4e-48 194.9 192 52.1
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 2.7e-46 189.5 184 49.5
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 4.6e-46 188.7 188 50.5
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 1.3e-45 187.2 179 53.6
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 1.7e-45 186.8 184 54.9
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 1.7e-45 186.8 190 50.0
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 2.3e-45 186.4 208 47.1
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 2.3e-45 186.4 208 48.1
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 2.3e-45 186.4 188 50.0
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 3.9e-45 185.7 190 50.5
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 5.0e-45 185.3 216 51.9
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 6.6e-45 184.9 208 46.6
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 6.6e-45 184.9 212 46.7
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 8.6e-45 184.5 188 50.0
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 8.6e-45 184.5 188 50.0
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 1.5e-44 183.7 211 48.3
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 1.5e-44 183.7 188 49.5
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 1.5e-44 183.7 188 50.0
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 2.5e-44 183.0 208 47.1
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 2.5e-44 183.0 188 49.5
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 2.5e-44 183.0 188 50.0
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 4.3e-44 182.2 186 49.5
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 7.3e-44 181.4 186 48.9
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 9.5e-44 181.0 163 54.0
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 3.6e-43 179.1 195 46.7
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 4.7e-43 178.7 187 50.3
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 4.7e-43 178.7 184 51.6
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 6.2e-43 178.3 177 53.7
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 2.3e-42 176.4 188 46.8
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 8.9e-42 174.5 195 46.2
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 2.6e-41 172.9 188 44.1
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 4.4e-41 172.2 188 48.4
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 4.9e-40 168.7 262 37.8
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.1e-39 167.5 185 49.7
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 9.2e-39 164.5 181 45.3
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 9.2e-39 164.5 195 43.1
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 9.2e-39 164.5 195 43.1
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 2.1e-38 163.3 185 49.2
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 3.5e-38 162.5 164 51.8
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 4.6e-38 162.2 214 43.9
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.3e-37 160.6 195 46.2
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 8.1e-35 151.4 125 61.6
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 2.9e-32 142.9 189 42.9
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 5.4e-31 138.7 186 40.3
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 1.6e-30 137.1 126 54.8
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 6.0e-30 135.2 153 50.3
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 7.8e-30 134.8 119 51.3
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 1.6e-27 127.1 127 52.8
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.4e-26 124.0 112 54.5
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 6.9e-26 121.7 115 55.7
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 7.6e-25 118.2 178 38.2
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 8.4e-24 114.8 83 66.3
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 4.6e-22 109.0 91 58.2
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 4.6e-22 109.0 180 38.3
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 4.6e-22 109.0 183 37.7
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 7.8e-22 108.2 180 38.3
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 8.7e-21 104.8 191 35.6
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 1.9e-20 103.6 134 39.6
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 3.5e-14 82.8 90 51.1
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 7.9e-14 81.6 136 40.4
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 3.6e-11 72.8 72 55.6
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 2.4e-10 70.1 50 66.0
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 3.1e-10 69.7 60 58.3
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 4.0e-10 69.3 70 54.3


User provided reference genes

Program Settings