Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G059650 Manihot esculenta HOM05D003122 ORTHO05D010195 1.6e-83 312.8 160 100.0
Manes.03G212950 Manihot esculenta HOM05D003122 ORTHO05D000002 6.0e-19 98.2 176 31.8
Manes.07G105102 Manihot esculenta HOM05D003122 ORTHO05D010195 5.6e-17 91.7 159 35.2
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 4.9e-13 78.6 62 54.8
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 8.4e-13 77.8 62 54.8
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.2e-12 75.5 62 51.6
Phvul.001G091900 Phaseolus vulgaris HOM05D003122 ORTHO05D000002 5.5e-12 75.1 157 30.6
Phvul.004G009341 Phaseolus vulgaris HOM05D007358 ORTHO05D009117 5.5e-12 75.1 157 30.6
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.1e-12 74.7 62 51.6
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 7.1e-12 74.7 62 51.6
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 1.6e-11 73.6 62 51.6
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.1e-11 73.2 62 53.2
Ca_14682_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.6e-11 72.0 62 48.4
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.1e-11 71.6 62 50.0
Ca_06552_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.9e-11 71.2 62 50.0
Ca_14374_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.3e-10 69.7 62 50.0
Ca_19227_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 3.0e-10 69.3 122 32.8
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 6.7e-10 68.2 63 44.4
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 6.7e-10 68.2 65 43.1
Ca_25971_v3 Cicer arietinum L. HOM05D001297 ORTHO05D001135 8.7e-10 67.8 122 32.0
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-09 67.0 122 31.1
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 1.5e-09 67.0 162 30.9
BcaC09g51720 Brassica carinata HOM05D000004 ORTHO05D000002 1.9e-09 66.6 67 43.3
Ca_16686_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 1.9e-09 66.6 63 47.6
Psat5g054960 Pisum sativum HOM05D003122 ORTHO05D000002 1.9e-09 66.6 163 31.9
Ca_27418_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.5e-09 66.2 161 29.2
VMungo0251G2087 Vigna mungo HOM05D009527 ORTHO05D010195 2.5e-09 66.2 63 39.7
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 2.5e-09 66.2 154 31.2
Ca_12199_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.7e-09 65.1 70 45.7
MELO3C028848.2 Cucumis melo HOM05D009641 ORTHO05D013069 5.7e-09 65.1 160 25.0
Thhalv10003066m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 5.7e-09 65.1 65 41.5
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 7.4e-09 64.7 63 44.4
VMungo1127G0760 Vigna mungo HOM05D012939 ORTHO05D010195 7.4e-09 64.7 70 37.1
Ca_25152_v3 Cicer arietinum L. HOM05D002770 ORTHO05D003011 1.3e-08 63.9 74 43.2
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.3e-08 63.9 68 36.8
VMungo1383G1247 Vigna mungo HOM05D000402 ORTHO05D010195 1.3e-08 63.9 63 41.3
Psat7g071040 Pisum sativum HOM05D003122 ORTHO05D000002 1.6e-08 63.5 71 39.4
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 1.6e-08 63.5 63 38.1
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 1.6e-08 63.5 63 44.4
Ca_03249_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.2e-08 63.2 76 38.2
Ca_12377_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.2e-08 63.2 108 37.0
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 2.2e-08 63.2 63 42.9
ECA238G2583 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.2e-08 63.2 63 38.1
Psat2g149640 Pisum sativum HOM05D003122 ORTHO05D000002 2.2e-08 63.2 63 39.7
arahy.Tifrunner.gnm1.ann1.K49PTT Arachis hypogaea HOM05D000004 ORTHO05D000002 2.8e-08 62.8 163 25.2
Ca_10305_v3 Cicer arietinum L. HOM05D001134 ORTHO05D000002 2.8e-08 62.8 121 29.8
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 2.8e-08 62.8 85 34.1
TPR.G21966 Trifolium pratense HOM05D001021 ORTHO05D000894 2.8e-08 62.8 63 39.7
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 2.8e-08 62.8 66 39.4
Carub.0001s3392 Capsella rubella HOM05D000004 ORTHO05D000002 4.8e-08 62.0 65 41.5
Ca_07639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.8e-08 62.0 142 26.1
Psat7g163640 Pisum sativum HOM05D003122 ORTHO05D000002 4.8e-08 62.0 161 28.0
VMungo0251G0341 Vigna mungo HOM05D000660 ORTHO05D010195 4.8e-08 62.0 64 39.1
VMungo0331G1449 Vigna mungo HOM05D009527 ORTHO05D010195 4.8e-08 62.0 64 39.1
VMungo0647G0580 Vigna mungo HOM05D000660 ORTHO05D010195 4.8e-08 62.0 64 37.5
CANSAT35G0070 Cannabis sativa HOM05D000004 ORTHO05D000002 6.3e-08 61.6 61 37.7
Ca_22816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.3e-08 61.6 80 40.0
Psat0s2139g0080 Pisum sativum HOM05D003122 ORTHO05D000002 6.3e-08 61.6 167 30.5
VMungo0647G0036 Vigna mungo HOM05D001600 ORTHO05D001502 6.3e-08 61.6 62 38.7
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 8.2e-08 61.2 121 27.3
Ca_23687_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 8.2e-08 61.2 75 44.0
VMungo0251G0994 Vigna mungo HOM05D002797 ORTHO05D010195 8.2e-08 61.2 161 25.5
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 8.2e-08 61.2 64 42.2
Ca_16100_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.1e-07 60.8 63 41.3
Sp4g05780 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-07 60.8 162 27.2
TPR.G27313 Trifolium pratense HOM05D000004 ORTHO05D000002 1.1e-07 60.8 61 36.1
ClCG06G010650 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.4e-07 60.5 66 36.4
TPR.G11444 Trifolium pratense HOM05D000004 ORTHO05D000002 1.4e-07 60.5 61 39.3
Psat0s2745g0200 Pisum sativum HOM05D003122 ORTHO05D000002 1.8e-07 60.1 167 30.5
Sp6g11780 Schrenkiella parvula HOM05D011239 ORTHO05D000002 1.8e-07 60.1 64 39.1
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 1.8e-07 60.1 62 38.7
VMungo0720G2490 Vigna mungo HOM05D012939 ORTHO05D010195 1.8e-07 60.1 134 26.1
Ca_20328_v3 Cicer arietinum L. HOM05D000004 ORTHO05D010195 2.4e-07 59.7 123 30.1
VMungo1080G0003 Vigna mungo HOM05D005948 ORTHO05D007689 3.1e-07 59.3 63 36.5
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 3.1e-07 59.3 64 39.1
Hma1.2p1_0812F.1_g222280 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.1e-07 58.9 116 29.3
TWI81G0970 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.1e-07 58.9 62 38.7
VMungo0540G2200 Vigna mungo HOM05D009527 ORTHO05D010195 4.1e-07 58.9 67 35.8
VMungo1309G2709 Vigna mungo HOM05D000618 ORTHO05D010195 4.1e-07 58.9 61 39.3
AT1G67020 Arabidopsis thaliana HOM05D010730 ORTHO05D000002 5.3e-07 58.5 127 29.1
Psat5g253800 Pisum sativum HOM05D000004 ORTHO05D000002 5.3e-07 58.5 61 36.1
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.9e-07 58.2 123 31.7
TPR.G34991 Trifolium pratense HOM05D009527 ORTHO05D013850 6.9e-07 58.2 72 38.9
VMungo0464G1634 Vigna mungo HOM05D012939 ORTHO05D010195 6.9e-07 58.2 70 34.3
VMungo1127G2266 Vigna mungo HOM05D009527 ORTHO05D010195 6.9e-07 58.2 158 25.3
Atru.chr4.870 Acer truncatum HOM05D000004 ORTHO05D000002 9.0e-07 57.8 62 38.7
ClCG09G014290 Citrullus lanatus HOM05D000004 ORTHO05D000002 9.0e-07 57.8 165 30.9
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 9.0e-07 57.8 161 26.7
Sopen00g004920 Solanum pennellii HOM05D000004 ORTHO05D000002 9.0e-07 57.8 156 25.6
SGA_v2.0_scaffold59G20758 Striga asiatica HOM05D000004 ORTHO05D000002 9.0e-07 57.8 137 29.2
Atru.chr11.883 Acer truncatum HOM05D000004 ORTHO05D000002 1.2e-06 57.4 61 42.6
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-06 57.4 62 33.9
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 1.2e-06 57.4 127 30.7
TPR.G6049 Trifolium pratense HOM05D012325 ORTHO05D013858 1.2e-06 57.4 58 37.9
Ca_08465_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-06 57.0 75 30.7
Ca_23727_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.5e-06 57.0 75 30.7
Ca_27173_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 1.5e-06 57.0 71 36.6
Manes.12G088990 Manihot esculenta HOM05D000004 ORTHO05D000002 1.5e-06 57.0 66 37.9
PSO675G7897 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 57.0 162 25.3
VMungo0647G1598 Vigna mungo HOM05D002051 ORTHO05D002041 1.5e-06 57.0 157 22.9
VMungo1383G1168 Vigna mungo HOM05D000140 ORTHO05D010195 1.5e-06 57.0 66 36.4
BcaB07g31748 Brassica carinata HOM05D000004 ORTHO05D000002 2.0e-06 56.6 61 41.0
Ca_03006_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.0e-06 56.6 63 36.5
ClCG03G010050 Citrullus lanatus HOM05D016213 ORTHO05D000002 2.0e-06 56.6 152 26.3
PSO063G4877 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-06 56.6 52 40.4
Psat0s3835g0040 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-06 56.6 61 34.4
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 2.0e-06 56.6 61 32.8
SHI02827 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-06 56.6 145 25.5
VMungo0251G1446 Vigna mungo HOM05D012939 ORTHO05D010195 2.0e-06 56.6 63 36.5
VMungo0720G0378 Vigna mungo HOM05D012939 ORTHO05D010195 2.0e-06 56.6 164 26.2
VMungo1080G1583 Vigna mungo HOM05D001060 ORTHO05D010195 2.0e-06 56.6 169 25.4
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 2.6e-06 56.2 63 34.9
PSO832G0807 Papaver somniferum HOM05D000004 ORTHO05D000002 2.6e-06 56.2 58 36.2
Psat6g169440 Pisum sativum HOM05D012325 ORTHO05D013858 2.6e-06 56.2 63 33.3
Psat6g169480 Pisum sativum HOM05D028757 ORTHO05D000002 2.6e-06 56.2 63 33.3
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 2.6e-06 56.2 66 36.4
CSS0049798 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.4e-06 55.8 145 29.0
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 3.4e-06 55.8 81 29.6
Sp6g11810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.4e-06 55.8 65 35.4
Sp6g13440 Schrenkiella parvula HOM05D008905 ORTHO05D000002 3.4e-06 55.8 121 28.1
TPR.G36084 Trifolium pratense HOM05D009527 ORTHO05D013850 3.4e-06 55.8 73 39.7
Ca_11846_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.5e-06 55.5 63 34.9
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.5e-06 55.5 63 34.9
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 4.5e-06 55.5 131 29.0
Ciclev10030074m.g Citrus clementina HOM05D000004 ORTHO05D000002 4.5e-06 55.5 159 24.5
Sp3g22620 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.5e-06 55.5 75 36.0
SpUn0027_0100 Schrenkiella parvula HOM05D008905 ORTHO05D000002 4.5e-06 55.5 75 36.0
VMungo0464G0549 Vigna mungo HOM05D001615 ORTHO05D001493 4.5e-06 55.5 52 46.2
VMungo0720G2070 Vigna mungo HOM05D012939 ORTHO05D010195 4.5e-06 55.5 63 36.5
Ca_05479_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.9e-06 55.1 61 39.3
Ca_07517_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.9e-06 55.1 131 29.0
Ca_27463_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.9e-06 55.1 108 30.6
Thhalv10002674m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 5.9e-06 55.1 166 27.7
Psat2g127640 Pisum sativum HOM05D000004 ORTHO05D000002 5.9e-06 55.1 62 35.5
Psat3g025360 Pisum sativum HOM05D000004 ORTHO05D000002 5.9e-06 55.1 62 30.6
Psat7g017240 Pisum sativum HOM05D000004 ORTHO05D000002 5.9e-06 55.1 62 30.6
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 5.9e-06 55.1 151 24.5
VMungo0720G0600 Vigna mungo HOM05D001082 ORTHO05D010195 5.9e-06 55.1 147 21.8
BcaC09g48121 Brassica carinata HOM05D061184 ORTHO05D000002 7.7e-06 54.7 97 30.9
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.7e-06 54.7 121 27.3
ClCG03G009890 Citrullus lanatus HOM05D000004 ORTHO05D000002 7.7e-06 54.7 135 26.7
COL.COLO4_08404 Corchorus olitorius HOM05D000004 ORTHO05D000002 7.7e-06 54.7 81 30.9
ECA232G4751 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.7e-06 54.7 178 24.7
HanXRQChr05g0142391 Helianthus annuus HOM05D003122 ORTHO05D000002 7.7e-06 54.7 155 29.0
PSO782G4520 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-06 54.7 73 32.9
Psat1g072000 Pisum sativum HOM05D000004 ORTHO05D000002 7.7e-06 54.7 61 36.1
Psat3g181760 Pisum sativum HOM05D000004 ORTHO05D000002 7.7e-06 54.7 61 36.1
Psat3g181800 Pisum sativum HOM05D000004 ORTHO05D000002 7.7e-06 54.7 61 36.1
QL12p011078 Quercus lobata HOM05D000432 ORTHO05D000002 7.7e-06 54.7 62 32.3
TAR643G0001 Trochodendron aralioides HOM05D000004 ORTHO05D000002 7.7e-06 54.7 65 32.3
BcaC07g37276 Brassica carinata HOM05D008905 ORTHO05D000002 1.0e-05 54.3 64 40.6


User provided reference genes

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