Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G059100 Manihot esculenta HOM05D005007 ORTHO05D006053 2.5e-50 201.8 104 100.0
Manes.16G043000 Manihot esculenta HOM05D005007 ORTHO05D006053 9.0e-32 140.2 108 75.0
Potri.004G061100 Populus trichocarpa HOM05D005007 ORTHO05D006053 7.4e-26 120.6 99 68.7
COL.COLO4_31238 Corchorus olitorius HOM05D005007 ORTHO05D006053 1.8e-24 115.9 106 59.4
Potri.011G070400 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.8e-24 115.9 96 67.7
Sabra04G0040400 Salix brachista HOM05D005007 ORTHO05D006053 4.1e-24 114.8 88 71.6
Duzib235G0435 Durio zibethinus HOM05D005007 ORTHO05D006053 1.2e-23 113.2 104 60.6
Thecc.06G165800 Theobroma cacao HOM05D005007 ORTHO05D006053 2.0e-23 112.5 98 63.3
Ciclev10017907m.g Citrus clementina HOM05D005007 ORTHO05D006053 1.0e-22 110.2 91 64.8
Duzib160G0236 Durio zibethinus HOM05D005007 ORTHO05D006053 1.3e-22 109.8 104 58.7
GSVIVG01021255001 Vitis vinifera HOM05D005007 ORTHO05D006053 1.1e-21 106.7 92 63.0
Dinv12754 Davidia involucrata HOM05D005007 ORTHO05D006053 3.2e-21 105.1 103 60.2
TWI09G0208 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 3.2e-21 105.1 103 59.2
Dinv32340 Davidia involucrata HOM05D005007 ORTHO05D006053 2.1e-20 102.4 96 63.5
Hma1.2p1_0934F.1_g238510 Hydrangea macrophylla HOM05D005007 ORTHO05D006053 2.1e-20 102.4 96 61.5
Duzib192G0425 Durio zibethinus HOM05D005007 ORTHO05D006053 7.9e-20 100.5 106 55.7
Actinidia35601 Actinidia chinensis HOM05D005007 ORTHO05D006053 1.0e-19 100.1 103 55.3
Gohir.D06G138700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.0e-19 100.1 104 56.7
Sabra11G0055100 Salix brachista HOM05D005007 ORTHO05D006053 1.0e-19 100.1 88 67.0
Gorai.010G161300 Gossypium raimondii HOM05D005007 ORTHO05D006053 1.3e-19 99.8 104 56.7
Gohir.A06G133600 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.8e-19 99.4 104 56.7
Atru.chr10.1572 Acer truncatum HOM05D005007 ORTHO05D006053 2.3e-19 99.0 100 55.0
Glyma.05G160900 Glycine max HOM05D005007 ORTHO05D006053 2.3e-19 99.0 86 61.6
Gohir.D05G156101 Gossypium hirsutum HOM05D005007 ORTHO05D006053 3.9e-19 98.2 73 65.8
QL05p049974 Quercus lobata HOM05D005007 ORTHO05D006053 3.9e-19 98.2 81 66.7
CiPaw.09G137100 Carya illinoinensis HOM05D005007 ORTHO05D006053 8.7e-19 97.1 103 51.5
Glyma.08G118300 Glycine max HOM05D005007 ORTHO05D006053 8.7e-19 97.1 89 61.8
Ca_17898_v3 Cicer arietinum L. HOM05D005007 ORTHO05D006053 1.5e-18 96.3 81 55.6
Cc02_g15570 Coffea canephora HOM05D005007 ORTHO05D006053 1.5e-18 96.3 110 53.6
Lalb_Chr13g0295281 Lupinus albus HOM05D005007 ORTHO05D006053 1.5e-18 96.3 92 57.6
Prupe.4G066600 Prunus persica HOM05D005007 ORTHO05D006053 2.5e-18 95.5 111 53.2
Sabra11G0058300 Salix brachista HOM05D005007 ORTHO05D006053 3.3e-18 95.1 80 65.0
Actinidia39520 Actinidia chinensis HOM05D005007 ORTHO05D006053 5.7e-18 94.4 92 56.5
Medtr8g087320 Medicago truncatula HOM05D005007 ORTHO05D006053 7.4e-18 94.0 86 55.8
Cpa.g.sc7.108 Carica papaya HOM05D005007 ORTHO05D006053 1.3e-17 93.2 91 57.1
Migut.H01413 Erythranthe guttata HOM05D005007 ORTHO05D006053 1.3e-17 93.2 89 58.4
Oeu060171.1 Olea europaea HOM05D005007 ORTHO05D006053 1.3e-17 93.2 102 54.9
CSS0026874 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 1.6e-17 92.8 90 60.0
MBI06_g18688_MAGBIO Magnolia biondii HOM05D005007 ORTHO05D006053 2.2e-17 92.4 87 54.0
Phvul.002G241000 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 2.2e-17 92.4 89 58.4
Gohir.A05G153450 Gossypium hirsutum HOM05D005007 ORTHO05D006053 2.8e-17 92.0 89 56.2
Haze_05357 Corylus avellana HOM05D005007 ORTHO05D006053 4.8e-17 91.3 79 58.2
Haze_09314 Corylus avellana HOM05D005007 ORTHO05D006053 4.8e-17 91.3 71 62.0
QL08p025919 Quercus lobata HOM05D005007 ORTHO05D006053 6.3e-17 90.9 81 58.0
CSS0021075 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 8.2e-17 90.5 95 57.9
Nn3g21105 Nelumbo nucifera HOM05D005007 ORTHO05D006053 8.2e-17 90.5 96 56.2
Psat7g068680 Pisum sativum HOM05D005007 ORTHO05D006053 8.2e-17 90.5 71 59.2
TPR.G6805 Trifolium pratense HOM05D000213 ORTHO05D000426 8.2e-17 90.5 70 60.0
arahy.Tifrunner.gnm1.ann1.HJBU6U Arachis hypogaea HOM05D005007 ORTHO05D006053 1.4e-16 89.7 84 58.3
CiPaw.12G113100 Carya illinoinensis HOM05D005007 ORTHO05D006053 1.8e-16 89.4 77 58.4
AUR62039477 Chenopodium quinoa HOM05D005007 ORTHO05D006053 1.8e-16 89.4 90 52.2
Oeu039881.1 Olea europaea HOM05D005007 ORTHO05D006053 2.4e-16 89.0 108 51.9
SalBow8G4395 Salvia bowleyana HOM05D005007 ORTHO05D006053 4.1e-16 88.2 90 51.1
Migut.H01416 Erythranthe guttata HOM05D005007 ORTHO05D006053 5.3e-16 87.8 80 58.8
arahy.Tifrunner.gnm1.ann1.VZS9XU Arachis hypogaea HOM05D005007 ORTHO05D006053 6.9e-16 87.4 84 57.1
PGR042G3787 Punica granatum HOM05D005007 ORTHO05D006053 6.9e-16 87.4 75 61.3
Thecc.07G118400 Theobroma cacao HOM05D005007 ORTHO05D006053 1.2e-15 86.7 101 50.5
Rhsim02G0146700 Rhododendron simsii HOM05D005007 ORTHO05D006053 2.0e-15 85.9 80 57.5
Sed0011988 Sechium edule HOM05D005007 ORTHO05D006053 2.0e-15 85.9 78 52.6
SalBow7G2341 Salvia bowleyana HOM05D005007 ORTHO05D006053 2.6e-15 85.5 90 56.7
Lalb_Chr03g0031211 Lupinus albus HOM05D005007 ORTHO05D006053 3.4e-15 85.1 81 60.5
Lsat_1_v5_gn_7_25701 Lactuca sativa HOM05D005007 ORTHO05D006053 4.5e-15 84.7 80 58.8
MD10G1275600 Malus domestica HOM05D005007 ORTHO05D006053 1.0e-14 83.6 89 52.8
DCAR_003989 Daucus carota HOM05D005007 ORTHO05D006053 1.3e-14 83.2 86 52.3
Ah.14g087010 Amaranthus hybridus HOM05D005007 ORTHO05D006053 1.7e-14 82.8 89 55.1
HanXRQChr02g0038411 Helianthus annuus HOM05D005007 ORTHO05D006053 1.7e-14 82.8 81 56.8
Peaxi162Scf00202g00119 Petunia axillaris HOM05D005007 ORTHO05D006053 5.0e-14 81.3 81 58.0
COL.COLO4_17528 Corchorus olitorius HOM05D005007 ORTHO05D006053 6.5e-14 80.9 104 48.1
FvH4_3g07320 Fragaria vesca HOM05D005007 ORTHO05D006053 8.5e-14 80.5 99 52.5
Manes.15G095801 Manihot esculenta HOM05D005007 ORTHO05D006053 8.5e-14 80.5 79 51.9
Rhsim06G0209000 Rhododendron simsii HOM05D005007 ORTHO05D006053 8.5e-14 80.5 106 47.2
Aqoxy4G00249 Aquilegia oxysepala HOM05D005007 ORTHO05D006053 1.1e-13 80.1 80 57.5
FAN11G0120 Fragaria x ananassa HOM05D005007 ORTHO05D006053 1.9e-13 79.3 109 48.6
Cpa.g.sc77.26 Carica papaya HOM05D005007 ORTHO05D006053 2.5e-13 79.0 82 51.2
ECA236G3784 Erigeron canadensis HOM05D005007 ORTHO05D006053 2.5e-13 79.0 89 50.6
FAN25G2704 Fragaria x ananassa HOM05D005007 ORTHO05D006053 2.5e-13 79.0 109 48.6
Glyma.06G227850 Glycine max HOM05D005007 ORTHO05D006053 2.5e-13 79.0 90 51.1
Glyma.06G227900 Glycine max HOM05D005007 ORTHO05D006053 2.5e-13 79.0 90 51.1
CDE10G0299 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 3.2e-13 78.6 81 54.3
CiPaw.11G159400 Carya illinoinensis HOM05D005007 ORTHO05D006053 4.2e-13 78.2 87 48.3
Glyma.12G156400 Glycine max HOM05D005007 ORTHO05D006053 4.2e-13 78.2 86 51.2
Lalb_Chr01g0006861 Lupinus albus HOM05D005007 ORTHO05D006053 4.2e-13 78.2 75 56.0
RcHm_v2.0_Chr5g0030711 Rosa chinensis HOM05D005007 ORTHO05D006053 4.2e-13 78.2 65 64.6
FAN21G0366 Fragaria x ananassa HOM05D005007 ORTHO05D006053 5.5e-13 77.8 101 50.5
Gorai.009G160600 Gossypium raimondii HOM05D005007 ORTHO05D006053 5.5e-13 77.8 53 66.0
arahy.Tifrunner.gnm1.ann1.G1B0F8 Arachis hypogaea HOM05D005007 ORTHO05D006053 7.2e-13 77.4 86 51.2
Phvul.011G165600 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 7.2e-13 77.4 85 52.9
VMungo1127G1862 Vigna mungo HOM05D005007 ORTHO05D006053 7.2e-13 77.4 87 51.7
ClCG01G023890 Citrullus lanatus HOM05D005007 ORTHO05D006053 9.4e-13 77.0 87 47.1
DCAR_007938 Daucus carota HOM05D005007 ORTHO05D006053 9.4e-13 77.0 77 53.2
RcHm_v2.0_Chr5g0011631 Rosa chinensis HOM05D005007 ORTHO05D006053 1.2e-12 76.6 86 48.8
vmacro11948 Vaccinium macrocarpon HOM05D005007 ORTHO05D006053 1.2e-12 76.6 79 55.7
MELO3C007199.2 Cucumis melo HOM05D005007 ORTHO05D006053 1.6e-12 76.3 89 44.9
Prupe.4G161500 Prunus persica HOM05D005007 ORTHO05D006053 2.1e-12 75.9 100 45.0
PGSC0003DMG400028468 Solanum tuberosum HOM05D005007 ORTHO05D006053 2.1e-12 75.9 98 51.0
Actinidia35210 Actinidia chinensis HOM05D005007 ORTHO05D006053 2.7e-12 75.5 80 52.5
Ciclev10022947m.g Citrus clementina HOM05D005007 ORTHO05D006053 2.7e-12 75.5 87 48.3
CsaV3_6G051040 Cucumis sativus L. HOM05D005007 ORTHO05D006053 2.7e-12 75.5 76 48.7
ClCG07G010220 Citrullus lanatus HOM05D005007 ORTHO05D006053 3.6e-12 75.1 87 54.0
TWI39G0558 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 3.6e-12 75.1 82 58.5
MSTRG.7429 Avicennia marina HOM05D005007 ORTHO05D006053 4.6e-12 74.7 94 47.9
MD00G1009400 Malus domestica HOM05D005007 ORTHO05D006053 4.6e-12 74.7 94 46.8
MD05G1295500 Malus domestica HOM05D005007 ORTHO05D006053 4.6e-12 74.7 94 46.8
Sabra16G0257800 Salix brachista HOM05D005007 ORTHO05D006053 6.1e-12 74.3 85 54.1
Solyc02g072170.3 Solanum lycopersicum HOM05D005007 ORTHO05D006053 6.1e-12 74.3 102 49.0
BraA08t33391Z Brassica rapa HOM05D005007 ORTHO05D006053 7.9e-12 73.9 77 55.8
Ah.09g233580 Amaranthus hybridus HOM05D005007 ORTHO05D006053 1.0e-11 73.6 83 50.6
Gohir.D01G042700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.0e-11 73.6 95 46.3
Gorai.002G053600 Gossypium raimondii HOM05D005007 ORTHO05D006053 1.0e-11 73.6 95 46.3
Sopen02g021150 Solanum pennellii HOM05D005007 ORTHO05D006053 1.0e-11 73.6 102 49.0
CANSAT35G0905 Cannabis sativa HOM05D005007 ORTHO05D006053 1.4e-11 73.2 45 68.9
FAN16G2723 Fragaria x ananassa HOM05D005007 ORTHO05D006053 1.8e-11 72.8 104 51.9
Lsat_1_v5_gn_5_126541 Lactuca sativa HOM05D005007 ORTHO05D006053 1.8e-11 72.8 98 43.9
MD11G1264800 Malus domestica HOM05D005007 ORTHO05D006053 1.8e-11 72.8 91 47.3
Nitab4.5_0007471g0020 Nicotiana tabacum HOM05D005007 ORTHO05D006053 2.3e-11 72.4 64 64.1
BcaB04g18501 Brassica carinata HOM05D005007 ORTHO05D006053 3.0e-11 72.0 75 54.7
CARHR225660 Cardamine hirsuta HOM05D005007 ORTHO05D006053 3.0e-11 72.0 89 47.2
CsaV3_4G008110 Cucumis sativus L. HOM05D005007 ORTHO05D006053 3.0e-11 72.0 87 52.9
Gohir.A01G053200 Gossypium hirsutum HOM05D005007 ORTHO05D006053 3.9e-11 71.6 90 46.7
Actinidia16774 Actinidia chinensis HOM05D005007 ORTHO05D006053 5.1e-11 71.2 63 54.0
Thhalv10027446m.g Eutrema salsugineum HOM05D005007 ORTHO05D006053 5.1e-11 71.2 72 52.8
Sed0017213 Sechium edule HOM05D005007 ORTHO05D006053 5.1e-11 71.2 81 45.7
Eucgr.F01249 Eucalyptus grandis HOM05D005007 ORTHO05D006053 6.7e-11 70.9 99 44.4
Sp7g17510 Schrenkiella parvula HOM05D005007 ORTHO05D006053 6.7e-11 70.9 75 52.0
Atru.chr2.2102 Acer truncatum HOM05D005007 ORTHO05D006053 8.8e-11 70.5 95 45.3
C03p81500 Brassica napus HOM05D005007 ORTHO05D006053 8.8e-11 70.5 77 54.5
BolC3t20421H Brassica oleracea HOM05D005007 ORTHO05D006053 8.8e-11 70.5 77 54.5
Carub.0007s2243 Capsella rubella HOM05D005007 ORTHO05D006053 8.8e-11 70.5 97 46.4
EL10Ac4g08365 Beta vulgaris HOM05D005007 ORTHO05D006053 1.1e-10 70.1 69 56.5
Sed0025620 Sechium edule HOM05D005007 ORTHO05D006053 1.1e-10 70.1 96 50.0
Potri.001G393001 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.5e-10 69.7 107 46.7
Nitab4.5_0000437g0140 Nicotiana tabacum HOM05D005007 ORTHO05D006053 2.0e-10 69.3 73 57.5
ATR0012G015 Amborella trichopoda HOM05D005007 ORTHO05D006053 5.7e-10 67.8 84 44.0
CDE10G1215 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 7.4e-10 67.4 48 70.8
Sc16g0007670 Simmondsia chinensis HOM05D005007 ORTHO05D006053 9.7e-10 67.0 100 42.0
Migut.M00716 Erythranthe guttata HOM05D005007 ORTHO05D006053 2.2e-09 65.9 58 55.2
unitig_0.g744 Utricularia gibba HOM05D005007 ORTHO05D006053 4.8e-09 64.7 80 50.0
Sabra11G0096200 Salix brachista HOM05D005007 ORTHO05D006053 1.1e-08 63.5 46 67.4
Actinidia18804 Actinidia chinensis HOM05D005007 ORTHO05D006053 1.4e-08 63.2 65 53.8
Nn6g34499 Nelumbo nucifera HOM05D005007 ORTHO05D006053 3.1e-08 62.0 49 69.4
Peaxi162Scf00111g01466 Petunia axillaris HOM05D005007 ORTHO05D006053 3.1e-08 62.0 71 52.1
SGA_v2.0_scaffold181G39748 Striga asiatica HOM05D002453 ORTHO05D008746 4.1e-08 61.6 48 58.3
HPP92_008753 Vanilla planifolia HOM05D005007 ORTHO05D006053 4.1e-08 61.6 98 38.8
Eucgr.D00467 Eucalyptus grandis HOM05D005007 ORTHO05D006053 1.2e-07 60.1 74 45.9
DCAR_005144 Daucus carota HOM05D005007 ORTHO05D006053 2.0e-07 59.3 96 41.7
PGSC0003DMG400044408 Solanum tuberosum HOM05D005007 ORTHO05D006053 2.6e-07 58.9 74 43.2
Potri.011G108700 Populus trichocarpa HOM05D005007 ORTHO05D006053 3.4e-07 58.5 83 48.2
Potri.001G389150 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.0e-06 57.0 85 45.9
Os06g0551500 Oryza sativa ssp. japonica HOM05D005007 ORTHO05D006053 6.5e-06 54.3 62 51.6


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