Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 1.2e-213 746.1 362 100.0
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 4.5e-163 578.2 372 74.7
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 1.0e-159 567.0 374 74.6
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 2.0e-158 562.8 370 73.0
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 4.4e-158 561.6 374 75.1
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 2.8e-157 558.9 361 73.7
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 4.8e-157 558.1 374 73.8
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 5.3e-156 554.7 367 72.8
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 7.0e-156 554.3 369 70.5
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 1.2e-155 553.5 367 72.5
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 3.5e-155 552.0 369 71.5
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 1.0e-154 550.4 374 71.1
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 2.9e-154 548.9 372 69.9
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 8.5e-154 547.4 369 71.0
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 1.5e-153 546.6 369 71.0
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 2.5e-153 545.8 371 71.2
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 3.2e-153 545.4 374 70.6
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 8.8e-151 537.3 372 68.5
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 4.4e-150 535.0 393 67.9
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 4.4e-150 535.0 371 68.7
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 1.7e-149 533.1 371 68.5
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 1.1e-148 530.4 377 69.2
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 1.4e-148 530.0 375 68.0
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 9.1e-148 527.3 372 70.4
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 2.0e-147 526.2 367 70.8
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 4.7e-144 515.0 367 65.4
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 4.7e-144 515.0 381 64.8
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 1.4e-143 513.5 365 65.5
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 2.3e-143 512.7 351 72.1
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 2.3e-143 512.7 374 64.4
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 6.8e-143 511.1 373 64.9
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 6.8e-143 511.1 362 66.9
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 8.8e-143 510.8 372 67.7
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 3.4e-142 508.8 372 68.0
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 4.4e-142 508.4 362 66.6
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 9.8e-142 507.3 372 66.7
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 9.8e-142 507.3 370 67.6
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 9.8e-142 507.3 374 63.6
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 1.7e-141 506.5 362 66.3
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 1.7e-141 506.5 369 67.8
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 1.7e-141 506.5 374 63.4
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 2.8e-141 505.8 370 67.0
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 6.3e-141 504.6 362 67.1
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 8.3e-141 504.2 373 64.6
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 1.4e-140 503.4 362 66.0
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 1.4e-140 503.4 373 64.3
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.8e-140 503.1 370 66.5
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 3.1e-140 502.3 369 66.1
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 5.4e-140 501.5 371 66.8
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 9.1e-140 500.7 370 66.5
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 3.2e-137 492.3 361 65.9
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 4.2e-137 491.9 370 65.1
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 5.5e-137 491.5 371 66.3
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 9.5e-137 490.7 377 62.6
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 1.0e-135 487.3 368 63.3
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 5.2e-135 485.0 358 64.8
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 5.2e-135 485.0 370 62.4
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 2.6e-134 482.6 361 64.3
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 9.8e-134 480.7 358 63.7
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 1.3e-133 480.3 356 64.3
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 3.1e-132 475.7 386 60.6
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 4.1e-132 475.3 352 65.3
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 2.0e-131 473.0 372 61.6
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 3.8e-130 468.8 350 64.3
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 3.8e-130 468.8 372 61.0
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 1.5e-129 466.8 372 61.0
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 2.5e-129 466.1 369 62.3
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.7e-128 461.8 370 63.0
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 1.0e-127 460.7 371 59.8
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 1.8e-127 459.9 372 58.6
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 2.3e-127 459.5 376 60.9
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 1.4e-124 450.3 373 57.9
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 7.8e-123 444.5 367 58.9
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 3.0e-122 442.6 369 58.8
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.1e-121 440.7 373 61.4
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 3.6e-120 435.6 360 59.7
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 4.0e-119 432.2 371 56.9
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 9.8e-118 427.6 369 60.2
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 1.0e-106 391.0 245 73.9
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 1.3e-101 374.0 380 48.2
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 2.9e-101 372.9 385 51.9
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 9.9e-94 347.8 305 55.4
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 2.2e-93 346.7 390 49.0
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 1.8e-82 310.5 348 49.7
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 1.9e-81 307.0 284 53.9
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 3.8e-77 292.7 183 72.7
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 4.2e-76 289.3 383 41.3
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 1.2e-70 271.2 366 40.4
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 3.2e-68 263.1 221 60.2
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 4.3e-65 252.7 324 40.4
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 9.7e-65 251.5 365 39.2
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 2.6e-62 243.4 149 73.2
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 8.5e-61 238.4 217 55.8
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 1.1e-60 238.0 206 58.7
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 2.1e-59 233.8 232 53.0
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 2.7e-59 233.4 186 64.0
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 7.9e-59 231.9 202 58.9
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 1.7e-56 224.2 185 65.9
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 8.2e-56 221.9 410 33.9
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 5.9e-54 215.7 248 47.6
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 2.1e-51 207.2 189 58.2
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 5.7e-49 199.1 200 53.5
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 5.7e-49 199.1 200 53.5
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 9.1e-47 191.8 126 69.0
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 1.3e-45 188.0 178 56.2
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 1.2e-43 181.4 102 81.4
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 6.7e-42 175.6 143 58.7
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 8.2e-40 168.7 148 58.8
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 7.7e-38 162.2 152 55.3
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 1.0e-37 161.8 263 39.2
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 2.9e-37 160.2 141 58.2
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 1.5e-36 157.9 122 57.4
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 6.5e-29 132.5 173 43.4
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 3.4e-25 120.2 103 49.5
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 6.5e-21 105.9 78 61.5
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 2.5e-20 104.0 176 32.4
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 3.3e-20 103.6 88 58.0
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 8.3e-16 89.0 74 51.4
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 5.4e-15 86.3 61 72.1
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 2.7e-14 84.0 166 39.8
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 2.7e-14 84.0 114 46.5
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 3.3e-12 77.0 149 39.6
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 9.5e-12 75.5 494 19.8
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 7.0e-07 59.3 80 41.2
arahy.Tifrunner.gnm1.ann1.PN7KIB Arachis hypogaea HOM05D006665 ORTHO05D018494 9.2e-07 58.9 32 75.0


User provided reference genes

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