Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 6.6e-171 604.0 311 100.0
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 5.7e-114 414.8 315 71.1
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 6.5e-110 401.4 324 68.8
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 1.2e-108 397.1 312 68.6
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 2.5e-106 389.4 310 68.4
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 4.8e-105 385.2 215 86.0
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 2.4e-104 382.9 222 83.3
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 3.1e-104 382.5 301 68.1
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 5.3e-104 381.7 247 77.3
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 1.2e-103 380.6 313 65.5
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 3.8e-102 375.6 314 64.6
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 5.0e-102 375.2 254 74.4
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.4e-101 373.6 315 65.7
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.9e-101 373.2 307 65.5
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 3.2e-101 372.5 313 66.8
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 7.2e-101 371.3 315 65.4
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 9.4e-101 370.9 309 64.1
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 1.2e-100 370.5 313 64.2
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.2e-100 370.5 304 65.8
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 2.7e-100 369.4 303 63.0
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 6.1e-100 368.2 215 80.9
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.1e-100 368.2 304 66.4
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.0e-99 367.5 289 67.5
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.4e-99 367.1 237 75.9
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.3e-99 366.3 304 66.4
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.1e-99 365.2 305 64.3
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 6.7e-99 364.8 295 66.4
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 6.7e-99 364.8 317 64.7
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 8.8e-99 364.4 297 67.3
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.5e-98 363.6 299 65.6
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 2.0e-98 363.2 254 72.0
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 3.3e-98 362.5 219 78.5
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 7.4e-98 361.3 304 63.5
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 7.4e-98 361.3 314 63.7
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 2.8e-97 359.4 305 64.3
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 4.1e-96 355.5 210 80.5
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 4.1e-96 355.5 292 64.0
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 5.3e-96 355.1 228 73.7
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 1.2e-95 354.0 300 63.7
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 2.6e-95 352.8 311 59.2
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 2.6e-95 352.8 314 60.5
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 4.5e-95 352.1 311 61.7
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 5.9e-95 351.7 300 63.3
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 7.7e-95 351.3 214 77.1
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.0e-94 350.9 313 62.3
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.3e-94 350.5 312 60.6
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 1.3e-94 350.5 239 70.7
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 8.5e-94 347.8 311 61.7
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.1e-93 347.4 314 61.5
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 1.1e-93 347.4 314 61.5
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 1.1e-93 347.4 241 70.5
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 3.2e-93 345.9 313 61.7
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 4.2e-93 345.5 311 61.7
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 4.2e-93 345.5 284 62.0
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 5.5e-93 345.1 314 62.1
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 7.2e-93 344.7 311 61.1
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 9.4e-93 344.4 310 61.6
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 2.1e-92 343.2 304 62.8
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 2.7e-92 342.8 313 60.4
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 3.6e-92 342.4 310 60.6
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 3.6e-92 342.4 310 60.6
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 3.0e-91 339.3 310 60.0
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 3.9e-91 339.0 284 62.0
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 1.5e-90 337.0 313 60.1
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.3e-89 334.0 285 62.8
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 2.2e-89 333.2 315 57.5
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.8e-88 330.1 232 72.0
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 3.1e-88 329.3 208 77.9
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 9.1e-88 327.8 263 66.2
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 1.6e-87 327.0 316 57.9
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.6e-87 327.0 210 74.3
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 2.0e-87 326.6 298 62.1
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 5.9e-87 325.1 303 59.4
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 5.9e-87 325.1 233 69.1
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 3.8e-86 322.4 234 70.1
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.9e-85 320.1 233 68.7
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.6e-84 317.0 313 57.8
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 3.4e-82 309.3 227 67.8
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.3e-81 307.4 222 65.8
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.4e-80 303.9 226 66.8
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 5.3e-80 302.0 304 55.3
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 7.0e-80 301.6 218 71.1
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.6e-79 300.4 313 55.3
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 5.9e-79 298.5 243 63.8
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.3e-78 297.4 317 53.9
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 9.4e-77 291.2 183 74.9
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 2.7e-76 289.7 213 64.8
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 2.0e-74 283.5 213 63.4
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 4.4e-74 282.3 173 78.0
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 7.5e-74 281.6 226 66.4
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 7.7e-71 271.6 289 53.6
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 2.5e-69 266.5 242 63.2
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 3.3e-69 266.2 266 59.0
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 5.5e-69 265.4 177 72.3
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 1.0e-62 244.6 253 50.2
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.5e-61 240.7 228 56.6
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.8e-60 236.5 232 57.8
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 2.6e-58 229.9 157 73.2
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 8.9e-51 204.9 197 53.3
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 1.1e-45 188.0 148 64.9
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 5.4e-40 169.1 103 76.7
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 1.7e-38 164.1 197 43.1
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 1.1e-37 161.4 108 71.3
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.2e-36 157.9 190 50.0
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 2.1e-36 157.1 253 36.8
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.4e-34 149.8 83 83.1
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 3.4e-34 149.8 110 63.6
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 4.2e-32 142.9 204 48.5
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 6.6e-30 135.6 251 36.3
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.1e-28 130.6 91 65.9
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 1.5e-26 124.4 77 79.2
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.6e-23 112.8 144 48.6
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 4.8e-20 102.8 70 72.9
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 3.1e-19 100.1 58 81.0
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 5.3e-19 99.4 69 66.7
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.6e-18 97.1 60 70.0
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.1e-16 91.7 59 72.9
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 9.3e-16 88.6 63 66.7
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.8e-09 66.6 57 57.9
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.0e-06 57.0 60 43.3


User provided reference genes

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