Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 1.5e-292 1008.8 510 100.0
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 3.7e-211 738.4 511 72.4
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 5.0e-208 728.0 511 69.7
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 2.5e-207 725.7 525 69.1
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 2.5e-207 725.7 511 68.9
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.8e-203 712.2 511 68.3
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 6.3e-203 711.1 510 68.4
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 3.1e-202 708.8 529 67.3
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 9.1e-202 707.2 511 68.1
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.6e-201 705.7 511 67.9
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 5.0e-200 701.4 552 63.6
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 2.1e-198 696.0 511 67.5
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.3e-197 692.6 512 67.0
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.1e-196 690.3 513 67.6
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 2.2e-195 686.0 512 66.8
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.5e-193 678.3 511 65.4
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.7e-192 676.4 511 66.1
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 2.9e-192 675.6 511 64.0
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 5.0e-192 674.9 511 64.2
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 1.9e-191 672.9 511 65.9
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 2.5e-191 672.5 522 64.6
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 2.5e-191 672.5 550 63.3
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 9.4e-191 670.6 511 64.8
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 1.6e-190 669.8 511 65.0
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 2.7e-190 669.1 512 65.8
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 6.1e-190 667.9 512 64.3
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 7.9e-190 667.5 511 63.4
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 3.0e-189 665.6 511 63.2
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 5.2e-189 664.8 511 65.4
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.3e-187 660.2 514 62.8
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 3.7e-187 658.7 511 64.4
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 7.0e-186 654.4 511 62.8
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 8.5e-184 647.5 511 62.4
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 3.2e-183 645.6 513 62.6
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.2e-183 645.6 511 64.2
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.6e-182 643.3 511 63.2
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 2.7e-182 642.5 511 62.8
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 6.1e-182 641.3 511 62.6
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 8.0e-182 641.0 511 62.8
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 3.0e-181 639.0 511 62.8
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 6.7e-181 637.9 512 62.1
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.7e-181 637.9 515 62.7
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 6.7e-181 637.9 511 62.8
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 1.2e-180 637.1 511 61.6
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 1.2e-180 637.1 512 61.1
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 1.2e-180 637.1 512 62.1
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 9.7e-180 634.0 512 61.3
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.2e-179 632.9 512 62.7
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 4.8e-179 631.7 514 62.8
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 6.3e-179 631.3 512 62.7
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 1.1e-178 630.6 512 61.5
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 4.1e-178 628.6 542 59.8
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 9.1e-178 627.5 513 61.4
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.3e-176 623.6 514 62.1
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 2.2e-176 622.9 514 61.1
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 2.2e-176 622.9 515 60.8
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 2.2e-176 622.9 512 60.9
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 8.5e-176 620.9 519 59.9
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 1.1e-175 620.5 516 60.5
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 4.2e-175 618.6 511 62.0
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 9.4e-175 617.5 542 61.8
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.2e-174 617.1 520 60.8
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 1.2e-174 617.1 509 59.7
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 2.7e-174 615.9 514 60.3
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 3.6e-174 615.5 516 59.9
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 3.6e-174 615.5 514 60.9
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 6.1e-174 614.8 483 64.0
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 5.2e-173 611.7 512 59.6
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 1.2e-172 610.5 514 60.1
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 1.3e-171 607.1 516 59.5
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 1.7e-171 606.7 519 59.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 4.8e-171 605.1 510 61.0
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 8.3e-171 604.4 514 59.9
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.4e-170 603.6 554 57.4
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 3.1e-170 602.4 521 58.9
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 4.1e-170 602.1 517 58.6
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 9.1e-170 600.9 515 59.4
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 9.1e-170 600.9 515 59.4
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 7.7e-169 597.8 460 63.5
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.1e-167 594.0 515 58.6
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 2.1e-166 589.7 497 60.2
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 3.6e-166 589.0 461 64.6
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 4.7e-166 588.6 438 68.9
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 4.7e-166 588.6 511 58.7
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 8.0e-166 587.8 494 60.1
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 8.9e-165 584.3 584 53.3
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 5.7e-164 581.6 506 58.9
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.7e-163 580.1 428 68.5
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.1e-162 575.5 591 53.8
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 1.2e-161 573.9 532 56.0
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 2.9e-160 569.3 488 59.4
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 3.7e-155 552.4 513 53.4
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 5.6e-151 538.5 453 59.8
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 9.2e-146 521.2 511 53.2
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 8.1e-142 508.1 470 58.9
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 4.9e-131 472.2 522 49.2
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 4.1e-130 469.2 462 51.1
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 6.0e-129 465.3 340 67.9
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 1.9e-127 460.3 376 62.2
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 1.4e-122 444.1 385 57.7
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 9.3e-122 441.4 325 70.2
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 5.4e-114 415.6 527 43.5
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 8.2e-102 375.2 377 56.8
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 1.0e-99 368.2 533 40.3
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 2.5e-95 353.6 430 48.6
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 2.4e-93 347.1 454 43.6
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 4.2e-90 336.3 387 46.3
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 8.2e-86 322.0 348 48.0
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 2.6e-79 300.4 319 49.8
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 1.8e-77 294.3 427 43.8
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 5.0e-75 286.2 238 58.8
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 6.5e-75 285.8 455 39.8
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 3.0e-72 276.9 196 67.9
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 3.3e-71 273.5 382 43.7
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.1e-57 227.6 181 64.6
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 4.4e-55 219.9 541 31.6
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 4.5e-52 209.9 355 36.3
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 8.0e-49 199.1 135 70.4
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.0e-45 186.0 132 69.7
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.0e-45 186.0 132 69.7
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.7e-43 181.4 136 67.6
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 8.9e-32 142.5 508 29.1
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.5e-31 141.7 192 43.8
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 2.3e-24 117.9 223 39.0
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 2.9e-22 110.9 116 49.1
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 6.4e-22 109.8 60 81.7
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 3.9e-19 100.5 64 73.4
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 3.9e-19 100.5 64 73.4
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.3e-18 96.3 72 63.9
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.1e-16 92.4 53 75.5
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 5.2e-16 90.1 76 51.3
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 2.0e-15 88.2 65 61.5
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 4.9e-14 83.6 64 65.6
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 2.1e-09 68.2 129 34.1


User provided reference genes

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