Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G045701 Manihot esculenta HOM05D000158 ORTHO05D000197 4.9e-60 234.2 111 100.0
Manes.09G089621 Manihot esculenta HOM05D000158 ORTHO05D000002 1.1e-24 116.7 65 81.5
MSTRG.22449 Avicennia marina HOM05D000004 ORTHO05D000048 1.2e-18 96.7 65 67.7
TPR.G13936 Trifolium pratense HOM05D000158 ORTHO05D000197 2.7e-18 95.5 63 66.7
TPR.G22537 Trifolium pratense HOM05D000158 ORTHO05D000197 2.7e-18 95.5 63 66.7
TPR.G32580 Trifolium pratense HOM05D000158 ORTHO05D003614 2.7e-18 95.5 63 66.7
Manes.09G074619 Manihot esculenta HOM05D000158 ORTHO05D000197 6.7e-17 90.9 63 66.7
Thhalv10029457m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 7.4e-16 87.4 64 62.5
PGSC0003DMG400022758 Solanum tuberosum HOM05D000158 ORTHO05D010408 4.8e-15 84.7 64 59.4
Glyma.05G072900 Glycine max HOM05D000158 ORTHO05D000197 8.2e-15 84.0 64 59.4
Lj3g0012861 Lotus japonicus HOM05D000158 ORTHO05D000197 1.8e-14 82.8 64 56.2
QL07p020245 Quercus lobata HOM05D000158 ORTHO05D000002 2.4e-14 82.4 61 60.7
Lj1g0004303 Lotus japonicus HOM05D000158 ORTHO05D000197 3.1e-14 82.0 64 56.2
Lj3g0008836 Lotus japonicus HOM05D000158 ORTHO05D000197 3.1e-14 82.0 64 56.2
Lj3g0020463 Lotus japonicus HOM05D000158 ORTHO05D000197 3.1e-14 82.0 64 56.2
Lj5g0012305 Lotus japonicus HOM05D000158 ORTHO05D000197 3.1e-14 82.0 64 56.2
TPR.G20471 Trifolium pratense HOM05D000004 ORTHO05D000002 3.1e-14 82.0 63 63.5
Lj1g0026464 Lotus japonicus HOM05D000158 ORTHO05D000197 4.1e-14 81.6 77 48.1
Lj6g0019227 Lotus japonicus HOM05D000158 ORTHO05D000197 5.3e-14 81.3 64 54.7
PGSC0003DMG400045112 Solanum tuberosum HOM05D000158 ORTHO05D000197 5.3e-14 81.3 64 57.8
Lj2g0010792 Lotus japonicus HOM05D000158 ORTHO05D000197 6.9e-14 80.9 64 56.2
Lj4g0011178 Lotus japonicus HOM05D000158 ORTHO05D000197 6.9e-14 80.9 64 54.7
Lj6g0006038 Lotus japonicus HOM05D000158 ORTHO05D000197 6.9e-14 80.9 64 54.7
LjContig00080g0010393 Lotus japonicus HOM05D000158 ORTHO05D000197 6.9e-14 80.9 64 54.7
LjContig00506g0000245 Lotus japonicus HOM05D000158 ORTHO05D000197 6.9e-14 80.9 64 54.7
Manes.17G011766 Manihot esculenta HOM05D000158 ORTHO05D000197 6.9e-14 80.9 63 60.3
Thhalv10023038m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 9.0e-14 80.5 55 69.1
Lj2g0019716 Lotus japonicus HOM05D000158 ORTHO05D000197 9.0e-14 80.5 63 55.6
Manes.17G011850 Manihot esculenta HOM05D000158 ORTHO05D000197 9.0e-14 80.5 63 58.7
Lj6g0015358 Lotus japonicus HOM05D000158 ORTHO05D000197 1.2e-13 80.1 64 56.2
CiPaw.04G143100 Carya illinoinensis HOM05D000158 ORTHO05D000197 1.5e-13 79.7 61 59.0
Lj1g0013168 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-13 79.7 64 54.7
Lj1g0019916 Lotus japonicus HOM05D000158 ORTHO05D000197 1.5e-13 79.7 64 54.7
CAN.G15806.1 Capsicum annuum HOM05D000158 ORTHO05D000197 2.6e-13 79.0 57 61.4
Oeu057633.1 Olea europaea HOM05D000158 ORTHO05D000197 3.4e-13 78.6 64 54.7
TPR.G1870 Trifolium pratense HOM05D000158 ORTHO05D000197 4.5e-13 78.2 63 57.1
Manes.01G032701 Manihot esculenta HOM05D000158 ORTHO05D000197 7.6e-13 77.4 64 57.8
Oeu053054.1 Olea europaea HOM05D000158 ORTHO05D010634 1.0e-12 77.0 64 53.1
Lj4g0018844 Lotus japonicus HOM05D000158 ORTHO05D000197 1.3e-12 76.6 64 54.7
Oeu005697.1 Olea europaea HOM05D000158 ORTHO05D002858 1.3e-12 76.6 64 53.1
Oeu006234.1 Olea europaea HOM05D000158 ORTHO05D000197 1.3e-12 76.6 64 53.1
Oeu015679.1 Olea europaea HOM05D000158 ORTHO05D000197 1.3e-12 76.6 64 53.1
Oeu028306.1 Olea europaea HOM05D000158 ORTHO05D000197 1.3e-12 76.6 64 53.1
Sopen06g013940 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-12 76.6 63 54.0
TPR.G15160 Trifolium pratense HOM05D000158 ORTHO05D002858 1.3e-12 76.6 63 57.1
ClCG03G013730 Citrullus lanatus HOM05D000158 ORTHO05D000002 1.7e-12 76.3 65 52.3
ClCG10G003450 Citrullus lanatus HOM05D000158 ORTHO05D000002 1.7e-12 76.3 65 52.3
Lj2g0001766 Lotus japonicus HOM05D000158 ORTHO05D000197 1.7e-12 76.3 64 56.2
PGSC0003DMG400036524 Solanum tuberosum HOM05D000158 ORTHO05D010408 1.7e-12 76.3 64 54.7
Thhalv10028167m.g Eutrema salsugineum HOM05D000158 ORTHO05D000197 2.2e-12 75.9 54 66.7
Lj5g0004307 Lotus japonicus HOM05D000158 ORTHO05D000197 2.2e-12 75.9 64 56.2
Oeu007102.1 Olea europaea HOM05D000158 ORTHO05D010634 2.9e-12 75.5 64 51.6
TPR.G31232 Trifolium pratense HOM05D000158 ORTHO05D002858 3.8e-12 75.1 63 58.7
TPR.G7146 Trifolium pratense HOM05D000004 ORTHO05D000002 5.0e-12 74.7 63 58.7
Manes.17G002683 Manihot esculenta HOM05D000158 ORTHO05D000197 6.5e-12 74.3 60 58.3
Oeu048057.1 Olea europaea HOM05D000158 ORTHO05D000197 6.5e-12 74.3 66 51.5
Sopen05g017700 Solanum pennellii HOM05D000014 ORTHO05D000093 8.5e-12 73.9 57 59.6
HanXRQChr02g0042331 Helianthus annuus HOM05D000158 ORTHO05D000197 1.1e-11 73.6 60 56.7
HanXRQChr02g0042351 Helianthus annuus HOM05D000158 ORTHO05D000197 1.1e-11 73.6 60 56.7
Oeu041041.1 Olea europaea HOM05D000158 ORTHO05D000197 1.1e-11 73.6 64 53.1
Oeu060640.1 Olea europaea HOM05D000158 ORTHO05D000197 1.1e-11 73.6 64 51.6
Lj1g0025016 Lotus japonicus HOM05D000158 ORTHO05D000197 1.4e-11 73.2 64 51.6
Migut.O00085 Erythranthe guttata HOM05D000158 ORTHO05D000197 1.9e-11 72.8 57 57.9
MELO3C004850.2 Cucumis melo HOM05D000158 ORTHO05D000197 2.5e-11 72.4 52 57.7
Lj2g0025380 Lotus japonicus HOM05D000158 ORTHO05D000197 4.2e-11 71.6 51 56.9
Oeu032984.1 Olea europaea HOM05D000158 ORTHO05D000197 5.5e-11 71.2 64 54.7
CiPaw.01G104600 Carya illinoinensis HOM05D000158 ORTHO05D000197 7.2e-11 70.9 52 59.6
Glyma.11G160800 Glycine max HOM05D000158 ORTHO05D000197 7.2e-11 70.9 52 57.7
Gorai.004G105400 Gossypium raimondii HOM05D000158 ORTHO05D000197 7.2e-11 70.9 64 51.6
Lj3g0009331 Lotus japonicus HOM05D000158 ORTHO05D000197 7.2e-11 70.9 53 54.7
Lj3g0014470 Lotus japonicus HOM05D000158 ORTHO05D000197 7.2e-11 70.9 53 54.7
Sopen09g009720 Solanum pennellii HOM05D010819 ORTHO05D010408 7.2e-11 70.9 64 51.6
PGSC0003DMG400040289 Solanum tuberosum HOM05D010819 ORTHO05D010408 9.4e-11 70.5 64 54.7
Oeu028104.1 Olea europaea HOM05D000158 ORTHO05D000197 1.2e-10 70.1 62 51.6
Lj1g0013324 Lotus japonicus HOM05D000158 ORTHO05D000197 1.6e-10 69.7 53 52.8
Lj3g0017745 Lotus japonicus HOM05D000158 ORTHO05D000197 1.6e-10 69.7 53 52.8
Lj5g0004453 Lotus japonicus HOM05D000158 ORTHO05D000197 1.6e-10 69.7 53 52.8
TPR.G22593 Trifolium pratense HOM05D000158 ORTHO05D000002 2.7e-10 68.9 55 61.8
CsaV3_1G030770 Cucumis sativus L. HOM05D000158 ORTHO05D000197 3.6e-10 68.6 49 57.1
Atru.chr4.1438 Acer truncatum HOM05D000158 ORTHO05D000197 7.9e-10 67.4 44 59.1
TPR.G315 Trifolium pratense HOM05D000158 ORTHO05D002858 7.9e-10 67.4 55 58.2
Lj1g0020144 Lotus japonicus HOM05D000158 ORTHO05D000197 2.3e-09 65.9 43 60.5
Lj5g0015403 Lotus japonicus HOM05D000158 ORTHO05D000197 3.0e-09 65.5 43 58.1
PGSC0003DMG400036915 Solanum tuberosum HOM05D000158 ORTHO05D000197 3.0e-09 65.5 55 54.5
Lj4g0028212 Lotus japonicus HOM05D000158 ORTHO05D000197 5.1e-09 64.7 64 51.6
Lj6g0009515 Lotus japonicus HOM05D000158 ORTHO05D000197 1.1e-08 63.5 64 50.0
CSS0043914 Camellia sinensis var. sinensis HOM05D000158 ORTHO05D000197 1.5e-08 63.2 49 55.1
arahy.Tifrunner.gnm1.ann1.J536F0 Arachis hypogaea HOM05D000158 ORTHO05D000197 2.5e-08 62.4 61 49.2
LjContig00141g0016135 Lotus japonicus HOM05D000158 ORTHO05D003614 2.5e-08 62.4 53 56.6
Lj4g0017546 Lotus japonicus HOM05D000158 ORTHO05D000197 3.3e-08 62.0 41 56.1
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 4.3e-08 61.6 43 53.5
TPR.G27444 Trifolium pratense HOM05D000158 ORTHO05D002858 4.3e-08 61.6 52 57.7
Migut.O00086 Erythranthe guttata HOM05D000158 ORTHO05D000197 9.7e-08 60.5 43 55.8
RcHm_v2.0_Chr2g0106171 Rosa chinensis HOM05D000158 ORTHO05D000002 1.7e-07 59.7 45 62.2
PGSC0003DMG400042426 Solanum tuberosum HOM05D000158 ORTHO05D011832 6.3e-07 57.8 43 53.5
CiPaw.08G029600 Carya illinoinensis HOM05D000158 ORTHO05D000197 1.1e-06 57.0 42 57.1
PGSC0003DMG400041568 Solanum tuberosum HOM05D000158 ORTHO05D000197 3.1e-06 55.5 32 65.6
arahy.Tifrunner.gnm1.ann1.F094KE Arachis hypogaea HOM05D000158 ORTHO05D000197 4.1e-06 55.1 56 50.0
Lj4g0014319 Lotus japonicus HOM05D000158 ORTHO05D002858 4.1e-06 55.1 53 52.8
LjContig00357g0027926 Lotus japonicus HOM05D000158 ORTHO05D002858 5.3e-06 54.7 53 52.8


User provided reference genes

Program Settings