Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 3.2e-136 488.4 248 100.0
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 6.4e-76 288.1 249 66.3
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 9.2e-59 231.1 251 55.4
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.0e-57 227.6 251 55.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.6e-50 203.8 254 53.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.3e-49 199.9 244 50.8
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 6.9e-46 188.3 239 52.7
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 9.0e-46 188.0 278 46.0
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 7.6e-45 184.9 257 52.1
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 9.9e-45 184.5 256 47.3
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 9.9e-45 184.5 252 47.6
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.3e-44 184.1 256 46.5
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 6.4e-44 181.8 254 46.5
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.1e-43 181.0 257 48.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 3.2e-43 179.5 255 48.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 4.2e-43 179.1 257 48.2
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.7e-42 176.4 262 48.1
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 3.5e-42 176.0 255 47.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 4.6e-42 175.6 260 48.5
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 6.0e-42 175.3 255 47.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 5.1e-41 172.2 242 50.0
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 5.1e-41 172.2 260 46.2
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 6.7e-41 171.8 257 48.2
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.8e-39 166.4 242 47.1
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 2.8e-39 166.4 255 49.8
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.7e-39 166.0 247 50.2
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 8.1e-39 164.9 251 49.4
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 1.1e-38 164.5 234 47.0
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.8e-38 163.7 255 47.5
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.4e-38 163.3 248 45.6
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 4.0e-38 162.5 253 47.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.0e-38 162.5 260 46.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 4.0e-38 162.5 233 50.6
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 5.3e-38 162.2 250 46.0
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 6.9e-38 161.8 248 45.6
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 9.0e-38 161.4 236 47.9
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.4e-37 159.5 250 43.2
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.9e-36 156.4 248 46.0
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.9e-36 156.4 248 45.6
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.1e-35 154.5 280 41.1
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.4e-35 154.1 212 47.6
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.5e-35 153.3 222 48.2
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.5e-35 153.3 255 46.7
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 2.1e-34 150.2 247 43.3
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.1e-34 150.2 247 43.3
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.1e-34 150.2 228 42.1
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.7e-34 149.8 238 44.1
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 7.9e-34 148.3 243 45.7
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.8e-33 147.1 242 46.7
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.9e-32 143.7 230 44.3
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 1.9e-32 143.7 261 41.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 3.3e-32 142.9 263 44.5
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.6e-31 140.6 268 40.3
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.6e-31 140.6 262 42.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 3.7e-31 139.4 234 42.7
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 8.2e-31 138.3 237 43.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 8.2e-31 138.3 246 41.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.8e-30 137.1 256 42.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 1.8e-30 137.1 243 44.9
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.4e-30 136.7 259 40.2
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.1e-30 136.3 259 40.2
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 4.0e-30 136.0 259 39.4
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.9e-30 135.2 239 41.8
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 6.9e-30 135.2 235 43.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.4e-29 132.9 236 44.9
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 3.8e-28 129.4 249 43.0
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.8e-28 129.4 240 42.1
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 6.5e-28 128.6 246 39.8
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 8.4e-28 128.3 245 41.6
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 8.4e-28 128.3 231 42.4
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 4.2e-27 125.9 134 50.0
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.5e-27 125.6 283 37.5
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 7.1e-27 125.2 242 39.3
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.2e-26 124.4 318 32.4
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.6e-26 124.0 249 41.0
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.7e-26 123.2 185 41.1
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.3e-25 120.9 289 35.3
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.8e-25 120.6 254 38.2
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.8e-25 120.6 249 40.6
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 3.0e-25 119.8 231 37.2
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 3.0e-25 119.8 133 50.4
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 3.9e-25 119.4 284 35.2
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 8.7e-25 118.2 243 40.3
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.1e-24 117.9 258 39.1
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 3.3e-24 116.3 246 40.2
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.7e-24 115.5 277 36.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 1.6e-23 114.0 256 37.5
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.7e-23 112.8 251 37.5
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 3.1e-22 109.8 121 48.8
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 5.3e-22 109.0 248 37.5
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 1.5e-21 107.5 242 39.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.6e-21 106.7 128 46.1
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 7.7e-21 105.1 238 37.4
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 1.3e-20 104.4 268 37.7
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.7e-20 104.0 258 39.5
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 6.5e-20 102.1 204 36.8
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 8.5e-20 101.7 260 35.8
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.1e-19 101.3 241 40.2
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.4e-19 100.9 245 39.6
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.4e-19 100.9 244 38.9
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 5.5e-19 99.0 236 34.3
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.2e-18 97.8 253 39.9
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.2e-18 97.8 253 39.9
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.6e-18 97.4 119 47.9
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 2.7e-18 96.7 249 31.7
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.1e-18 95.5 252 35.7
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 1.0e-17 94.7 249 36.5
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.8e-17 94.0 249 32.1
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 2.3e-17 93.6 197 39.1
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 3.3e-16 89.7 301 35.9
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 5.7e-16 89.0 121 46.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 7.4e-16 88.6 174 42.0
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.7e-15 86.3 252 33.3
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 2.1e-10 70.5 162 40.1
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 7.9e-10 68.6 80 43.8
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.0e-08 63.9 213 31.0
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 2.6e-08 63.5 135 35.6
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.8e-07 60.1 268 28.4
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 4.1e-06 56.2 251 29.1
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 7.0e-06 55.5 168 35.1


User provided reference genes

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