Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G027900 Manihot esculenta HOM05D006535 ORTHO05D008548 3.1e-276 954.5 482 100.0
Duzib235G1465 Durio zibethinus HOM05D006535 ORTHO05D008548 1.0e-178 630.6 540 63.3
Thecc.06G227200 Theobroma cacao HOM05D006535 ORTHO05D008548 3.3e-177 625.5 542 63.3
COL.COLO4_37574 Corchorus olitorius HOM05D006535 ORTHO05D008548 5.8e-174 614.8 540 62.4
QL05p072061 Quercus lobata HOM05D006535 ORTHO05D008548 1.7e-173 613.2 542 62.4
Potri.004G005500 Populus trichocarpa HOM05D006535 ORTHO05D008548 2.2e-173 612.8 545 62.6
CANSAT56G3727 Cannabis sativa HOM05D006535 ORTHO05D008548 3.7e-173 612.1 547 61.2
GSVIVG01012659001 Vitis vinifera HOM05D006535 ORTHO05D008548 4.9e-173 611.7 542 61.6
CiPaw.09G097300 Carya illinoinensis HOM05D006535 ORTHO05D008548 1.1e-172 610.5 540 63.0
Haze_06851 Corylus avellana HOM05D006535 ORTHO05D008548 1.4e-172 610.1 540 62.0
MD05G1351700 Malus domestica HOM05D006535 ORTHO05D008548 1.9e-172 609.8 542 62.0
PGR042G2820 Punica granatum HOM05D006535 ORTHO05D008548 5.4e-172 608.2 538 62.6
FvH4_3g01470 Fragaria vesca HOM05D006535 ORTHO05D008548 1.6e-171 606.7 540 61.1
Cfa000168 Carpinus fangiana HOM05D006535 ORTHO05D008548 2.1e-171 606.3 539 61.8
Eucgr.E03992 Eucalyptus grandis HOM05D006535 ORTHO05D008548 7.8e-171 604.4 540 61.9
TWI38G0380 Tripterygium wilfordii HOM05D006535 ORTHO05D008548 1.7e-170 603.2 543 61.3
Dinv13934 Davidia involucrata HOM05D006535 ORTHO05D008548 3.9e-170 602.1 525 63.8
Hma1.2p1_1358F.1_g277940 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.5e-169 600.1 526 62.5
RcHm_v2.0_Chr5g0002321 Rosa chinensis HOM05D006535 ORTHO05D008548 2.8e-168 595.9 546 59.7
MELO3C021729.2 Cucumis melo HOM05D006535 ORTHO05D008548 6.2e-168 594.7 540 60.2
Potri.011G010400 Populus trichocarpa HOM05D006535 ORTHO05D008548 1.8e-167 593.2 536 60.6
Sed0002831 Sechium edule HOM05D006535 ORTHO05D008548 1.3e-165 587.0 556 59.7
Glyma.09G007100 Glycine max HOM05D006535 ORTHO05D008548 2.9e-165 585.9 542 60.9
CsaV3_1G046130 Cucumis sativus L. HOM05D006535 ORTHO05D008548 6.4e-165 584.7 541 58.8
Glyma.15G111500 Glycine max HOM05D006535 ORTHO05D008548 8.4e-165 584.3 545 60.0
Gohir.A10G011200 Gossypium hirsutum HOM05D006535 ORTHO05D008548 1.1e-164 583.9 540 60.0
Rhsim02G0105100 Rhododendron simsii HOM05D006535 ORTHO05D008548 1.4e-164 583.6 533 60.4
Gorai.011G011900 Gossypium raimondii HOM05D006535 ORTHO05D008548 4.2e-164 582.0 540 60.4
Sc05g0009420 Simmondsia chinensis HOM05D006535 ORTHO05D008548 5.4e-164 581.6 549 58.1
Gohir.D10G010800 Gossypium hirsutum HOM05D006535 ORTHO05D008548 2.1e-163 579.7 540 60.2
TAR626G0131 Trochodendron aralioides HOM05D006535 ORTHO05D008548 3.5e-163 578.9 543 58.6
Cc09_g01280 Coffea canephora HOM05D006535 ORTHO05D008548 1.3e-162 577.0 526 61.8
Actinidia11871 Actinidia chinensis HOM05D006535 ORTHO05D008548 3.0e-162 575.9 524 60.3
Lj6g0003188 Lotus japonicus HOM05D006535 ORTHO05D008548 3.0e-162 575.9 545 59.6
Phvul.006G146200 Phaseolus vulgaris HOM05D006535 ORTHO05D008548 3.9e-162 575.5 542 59.4
Nn1g07251 Nelumbo nucifera HOM05D006535 ORTHO05D008548 1.1e-161 573.9 484 62.8
Psat1g177760 Pisum sativum HOM05D006535 ORTHO05D008548 1.9e-161 573.2 542 59.8
Migut.H01587 Erythranthe guttata HOM05D006535 ORTHO05D008548 4.3e-161 572.0 533 60.6
VMungo0540G1326 Vigna mungo HOM05D006535 ORTHO05D008548 7.3e-161 571.2 479 63.9
arahy.Tifrunner.gnm1.ann1.P3I999 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.6e-160 568.9 513 60.4
ClCG01G009650 Citrullus lanatus HOM05D006535 ORTHO05D008548 3.6e-160 568.9 564 57.3
Aqoxy1G03005 Aquilegia oxysepala HOM05D006535 ORTHO05D008548 5.3e-159 565.1 546 57.1
Ca_00689_v3 Cicer arietinum L. HOM05D006535 ORTHO05D008548 5.3e-159 565.1 477 63.5
Lalb_Chr18g0056581 Lupinus albus HOM05D006535 ORTHO05D008548 9.0e-159 564.3 542 58.1
MSTRG.14630 Avicennia marina HOM05D006535 ORTHO05D008548 1.5e-158 563.5 527 58.4
Medtr2g024310 Medicago truncatula HOM05D006535 ORTHO05D008548 1.3e-157 560.5 471 64.5
THA.LOC104812977 Tarenaya hassleriana HOM05D006535 ORTHO05D008548 3.8e-157 558.9 542 56.6
AUR62012752 Chenopodium quinoa HOM05D006535 ORTHO05D008548 4.2e-156 555.4 542 57.7
FAN21G0938 Fragaria x ananassa HOM05D006535 ORTHO05D008548 9.3e-156 554.3 536 57.3
Lsat_1_v5_gn_1_129581 Lactuca sativa HOM05D006535 ORTHO05D008548 9.3e-156 554.3 526 57.8
PSO541G2423 Papaver somniferum HOM05D006535 ORTHO05D008548 1.2e-155 553.9 551 55.5
HanXRQChr01g0006511 Helianthus annuus HOM05D006535 ORTHO05D008548 2.7e-155 552.7 527 57.7
vmacro15802 Vaccinium macrocarpon HOM05D006535 ORTHO05D008548 3.5e-155 552.4 497 60.2
ECA248G3623 Erigeron canadensis HOM05D006535 ORTHO05D008548 1.5e-153 547.0 483 60.2
Hund23439 Selenicereus undatus HOM05D006535 ORTHO05D008548 1.5e-153 547.0 541 56.0
Sp6g04530 Schrenkiella parvula HOM05D006535 ORTHO05D008548 2.0e-150 536.6 548 54.4
CAN.G23.21 Capsicum annuum HOM05D006535 ORTHO05D008548 4.5e-150 535.4 533 56.1
CARHR253140 Cardamine hirsuta HOM05D006535 ORTHO05D008548 4.5e-150 535.4 533 56.5
AT4G04320 Arabidopsis thaliana HOM05D006535 ORTHO05D008548 7.6e-150 534.6 535 55.5
Carub.0006s3215 Capsella rubella HOM05D006535 ORTHO05D008548 1.1e-148 530.8 536 55.6
AL6G47860 Arabidopsis lyrata HOM05D006535 ORTHO05D008548 1.9e-148 530.0 536 55.2
A03p29930 Brassica napus HOM05D006535 ORTHO05D008548 9.3e-148 527.7 540 54.4
BcaC01g04564 Brassica carinata HOM05D006535 ORTHO05D008548 1.6e-147 526.9 540 54.8
BcaB01g02601 Brassica carinata HOM05D006535 ORTHO05D008548 2.7e-147 526.2 533 54.8
BraA03t12182Z Brassica rapa HOM05D006535 ORTHO05D008548 2.7e-147 526.2 540 54.1
DCAR_024986 Daucus carota HOM05D006535 ORTHO05D008548 3.5e-147 525.8 451 61.2
BolC3t15931H Brassica oleracea HOM05D006535 ORTHO05D008548 4.6e-147 525.4 540 54.4
Ciclev10015047m.g Citrus clementina HOM05D006535 ORTHO05D008548 7.9e-147 524.6 514 58.2
C03p36220 Brassica napus HOM05D006535 ORTHO05D008548 1.3e-146 523.9 540 54.3
arahy.Tifrunner.gnm1.ann1.H9DKU3 Arachis hypogaea HOM05D006535 ORTHO05D008548 3.9e-146 522.3 535 55.3
Ah.09g234560 Amaranthus hybridus HOM05D006535 ORTHO05D008548 5.1e-146 521.9 549 55.0
Oeu049693.4 Olea europaea HOM05D006535 ORTHO05D008548 1.1e-145 520.8 589 52.6
unitig_61.g26097 Utricularia gibba HOM05D006535 ORTHO05D008548 9.6e-145 517.7 455 59.1
AUR62021906 Chenopodium quinoa HOM05D006535 ORTHO05D008548 3.1e-143 512.7 463 59.4
Thhalv10028619m.g Eutrema salsugineum HOM05D006535 ORTHO05D008548 4.0e-143 512.3 481 57.6
Prupe.I000100 Prunus persica HOM05D006535 ORTHO05D008548 2.6e-142 509.6 457 63.0
Aa31LG9G9880 Aethionema arabicum HOM05D006535 ORTHO05D008548 9.9e-142 507.7 539 54.0
ATR0686G032 Amborella trichopoda HOM05D006535 ORTHO05D008548 2.2e-141 506.5 551 52.5
Nitab4.5_0002668g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 3.8e-141 505.8 439 61.0
FAN25G2414 Fragaria x ananassa HOM05D006535 ORTHO05D008548 5.8e-134 481.9 554 52.2
HPP92_010356 Vanilla planifolia HOM05D006535 ORTHO05D008548 2.5e-129 466.5 545 50.6
CDE06G1909 Ceratophyllum demersum HOM05D006535 ORTHO05D008548 5.7e-129 465.3 546 49.5
SEGI_21824 Sequoiadendron giganteum HOM05D006535 ORTHO05D008548 3.7e-128 462.6 538 48.7
EL10Ac8g20123 Beta vulgaris HOM05D006535 ORTHO05D008548 1.5e-126 457.2 416 58.9
Zm00001eb099100 Zea mays HOM05D006535 ORTHO05D008548 2.3e-122 443.4 457 53.0
Sabra04G0002800 Salix brachista HOM05D006535 ORTHO05D008548 4.8e-120 435.6 333 70.3
TPR.G33068 Trifolium pratense HOM05D006535 ORTHO05D008548 1.4e-119 434.1 330 70.9
Os09g0394100 Oryza sativa ssp. japonica HOM05D006535 ORTHO05D008548 3.1e-119 433.0 468 51.3
Hma1.2p1_1358F.1_g277950 Hydrangea macrophylla HOM05D006535 ORTHO05D008548 1.3e-112 411.0 250 82.4
PGSC0003DMG401021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 5.0e-109 399.1 329 64.4
AagrBONN_evm.TU.Sc2ySwM_117.3852 Anthoceros agrestis HOM05D006535 ORTHO05D008548 1.1e-100 371.3 526 42.2
Mapoly0112s0027 Marchantia polymorpha HOM05D006535 ORTHO05D008548 1.6e-99 367.5 473 44.2
SMO367G0626 Selaginella moellendorffii HOM05D000208 ORTHO05D008548 1.2e-97 361.3 492 43.1
Lj1C1235T17 Lonicera japonica HOM05D006535 ORTHO05D008548 1.8e-95 354.0 465 47.1
Nitab4.5_0000005g0020 Nicotiana tabacum HOM05D006535 ORTHO05D008548 2.0e-94 350.5 242 72.3
Pp3c1_9420 Physcomitrium patens HOM05D006535 ORTHO05D008548 1.6e-91 340.9 487 41.1
Peaxi162Scf00294g01013 Petunia axillaris HOM05D006535 ORTHO05D008548 4.3e-76 289.7 436 41.3
SGA_v2.0_scaffold89G27482 Striga asiatica HOM05D006535 ORTHO05D008548 4.0e-58 229.9 256 53.1
CBR_g2794 Chara braunii HOM05D006535 ORTHO05D008548 7.8e-54 215.7 264 44.7
Prupe.4G015900 Prunus persica HOM05D006535 ORTHO05D008548 3.2e-47 193.7 154 64.3
Atru.chr10.2274 Acer truncatum HOM05D006535 ORTHO05D008548 1.6e-46 191.4 118 77.1
TPR.G13151 Trifolium pratense HOM05D006535 ORTHO05D008548 2.8e-43 180.6 114 75.4
PGSC0003DMG402021462 Solanum tuberosum HOM05D006535 ORTHO05D008548 1.3e-40 171.8 118 66.9
Eucgr.E03995 Eucalyptus grandis HOM05D006535 ORTHO05D000824 1.6e-35 154.8 90 78.9
Cpa.g.c42047 Carica papaya HOM05D006535 ORTHO05D008548 3.2e-31 140.6 78 84.6
BolC9t56193H Brassica oleracea HOM05D006535 ORTHO05D008548 1.9e-28 131.3 239 38.5
Solyc02g036290.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 3.3e-28 130.6 91 69.2
CBR_g2795 Chara braunii HOM05D006535 ORTHO05D008548 1.3e-27 128.6 162 42.0
C09p33590 Brassica napus HOM05D006535 ORTHO05D008548 1.2e-25 122.1 239 37.2
Cre02.g145200 Chlamydomonas reinhardtii HOM05D006535 ORTHO05D008548 3.9e-21 107.1 431 26.2
RcHm_v2.0_Chr5g0002771 Rosa chinensis HOM05D006535 ORTHO05D008548 1.3e-19 102.1 64 78.1
Sopen02g011690 Solanum pennellii HOM05D006535 ORTHO05D008548 1.1e-18 99.0 149 43.6
Nitab4.5_0017473g0010 Nicotiana tabacum HOM05D006535 ORTHO05D008548 1.4e-18 98.6 142 40.8
Solyc02g036310.4 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.5e-17 95.1 89 51.7
Carub.0007s3335 Capsella rubella HOM05D006535 ORTHO05D008548 6.5e-16 89.7 127 42.5
A09p26400 Brassica napus HOM05D006535 ORTHO05D033081 6.9e-10 69.7 229 28.8
C03p62470 Brassica napus HOM05D006535 ORTHO05D042350 6.5e-08 63.2 161 30.4
BolC3t18504H Brassica oleracea HOM05D006535 ORTHO05D042350 6.5e-08 63.2 161 30.4
BcaC02g09432 Brassica carinata HOM05D006535 ORTHO05D008548 1.9e-07 61.6 34 82.4
RcHm_v2.0_Chr3g0487171 Rosa chinensis HOM05D006535 ORTHO05D008548 5.5e-07 60.1 98 39.8
Solyc02g036300.3 Solanum lycopersicum HOM05D006535 ORTHO05D008548 1.6e-06 58.5 39 66.7


User provided reference genes

Program Settings