Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 3.1e-153 545.0 269 100.0
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.4e-121 439.9 269 80.7
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 6.8e-116 421.0 269 76.6
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 1.2e-115 420.2 272 79.4
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 2.0e-115 419.5 269 77.7
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 7.8e-112 407.5 270 73.7
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.3e-111 406.8 269 75.1
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 3.6e-109 398.7 288 71.5
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 6.2e-109 397.9 249 78.7
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.4e-108 396.7 260 75.8
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.2e-107 393.7 270 71.9
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 4.2e-105 385.2 261 74.3
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.0e-103 380.6 256 73.8
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.9e-103 378.6 271 73.8
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 5.1e-103 378.3 245 78.8
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 3.3e-102 375.6 270 73.7
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 4.3e-102 375.2 264 71.2
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.6e-101 373.2 259 73.7
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 2.8e-101 372.5 266 69.2
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 2.8e-101 372.5 291 67.4
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 2.8e-101 372.5 279 68.8
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 2.8e-101 372.5 271 70.5
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.6e-101 372.1 250 75.2
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.6e-101 372.1 268 69.4
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 8.1e-101 370.9 279 68.8
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.1e-100 370.5 266 69.5
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.4e-100 370.2 272 69.5
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 3.1e-100 369.0 258 71.7
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 4.0e-100 368.6 267 68.2
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 4.0e-100 368.6 267 68.5
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 9.0e-100 367.5 267 68.2
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 3.4e-99 365.5 268 72.8
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 3.4e-99 365.5 279 67.4
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 9.9e-99 364.0 264 68.9
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 9.9e-99 364.0 259 73.0
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 1.3e-98 363.6 267 69.3
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 2.2e-98 362.8 237 78.5
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 1.1e-97 360.5 259 71.4
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.4e-97 360.1 265 69.1
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 3.2e-97 359.0 233 79.8
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 5.4e-97 358.2 252 73.0
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 5.4e-97 358.2 251 72.1
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.1e-97 357.8 269 69.9
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 9.3e-97 357.5 259 71.0
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 9.3e-97 357.5 268 68.3
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 1.2e-96 357.1 268 66.8
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 1.6e-96 356.7 269 69.5
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 6.0e-96 354.8 268 70.1
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 6.0e-96 354.8 262 71.0
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 7.9e-96 354.4 250 72.0
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.8e-95 353.2 251 72.5
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 8.7e-95 350.9 269 66.9
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 8.7e-95 350.9 262 67.2
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 1.1e-94 350.5 261 67.8
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.5e-94 350.1 259 71.0
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 3.3e-94 349.0 269 67.3
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 4.3e-94 348.6 201 85.6
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 4.3e-94 348.6 261 65.5
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 5.6e-94 348.2 254 70.5
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 7.4e-94 347.8 263 69.2
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.3e-93 347.1 268 66.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.6e-93 346.7 263 68.1
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 1.6e-93 346.7 255 70.2
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 1.6e-93 346.7 273 64.5
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 2.1e-93 346.3 269 66.2
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 6.2e-93 344.7 264 67.8
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 1.4e-92 343.6 231 75.8
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.8e-92 343.2 231 72.7
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 4.0e-92 342.0 251 69.7
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 5.3e-92 341.7 257 68.5
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 1.5e-91 340.1 257 68.9
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 4.5e-91 338.6 261 67.0
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 5.8e-91 338.2 232 72.8
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 3.2e-89 332.4 260 62.7
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 6.0e-88 328.2 187 85.6
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 6.7e-87 324.7 213 74.2
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.1e-86 323.9 246 70.7
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 2.5e-86 322.8 239 66.9
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 7.4e-86 321.2 246 69.5
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 9.6e-86 320.9 198 78.8
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 9.6e-86 320.9 200 79.0
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.7e-85 318.9 208 76.4
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 1.8e-84 316.6 232 68.1
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 3.1e-84 315.8 183 81.4
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 5.3e-84 315.1 263 60.8
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 2.0e-83 313.2 251 66.9
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 2.0e-83 313.2 190 80.0
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 2.6e-83 312.8 208 76.0
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 2.6e-83 312.8 208 76.0
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 2.6e-83 312.8 208 76.0
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 4.5e-83 312.0 199 77.9
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 2.2e-82 309.7 194 77.8
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 1.1e-78 297.4 194 75.8
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 1.9e-78 296.6 230 63.5
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 4.8e-77 292.0 193 76.2
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 4.1e-76 288.9 195 69.7
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 2.2e-74 283.1 220 68.2
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 2.2e-74 283.1 220 68.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 1.6e-72 276.9 167 80.2
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 3.6e-64 249.2 187 63.1
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 2.8e-61 239.6 185 61.6
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 2.0e-51 206.8 121 82.6
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 5.9e-51 205.3 190 54.7
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 1.3e-50 204.1 140 71.4
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 6.7e-47 191.8 103 85.4
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 5.5e-33 145.6 93 75.3
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 9.2e-28 128.3 123 56.9
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.5e-27 125.9 81 76.5
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 8.0e-24 115.2 96 60.4
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 4.0e-23 112.8 157 43.3
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 4.7e-16 89.4 152 32.9
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 2.0e-14 84.0 87 50.6
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 1.7e-10 70.9 166 30.1
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 3.3e-09 66.6 35 94.3
Nn1g08227 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.3e-07 60.5 33 84.8


User provided reference genes

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