Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 3.2e-292 1007.7 498 100.0
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 5.9e-214 747.7 492 75.4
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 5.0e-213 744.6 482 76.3
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.5e-201 706.4 480 71.0
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.8e-199 699.5 494 69.6
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 3.8e-197 691.8 497 68.4
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 3.3e-196 688.7 481 69.6
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 1.6e-195 686.4 487 69.4
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 2.8e-195 685.6 480 68.3
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 4.0e-194 681.8 482 68.3
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 4.4e-193 678.3 494 69.4
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.9e-192 675.6 485 67.8
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 7.0e-191 671.0 498 65.5
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 4.6e-190 668.3 492 68.1
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 1.7e-189 666.4 498 66.1
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 4.3e-188 661.8 478 66.9
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.8e-186 656.4 490 64.1
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 2.3e-186 656.0 476 67.2
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 4.0e-186 655.2 498 67.1
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.1e-180 637.1 498 65.7
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.3e-180 635.6 491 64.4
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.4e-178 630.2 489 64.4
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 4.9e-176 621.7 491 63.3
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.4e-175 619.4 438 68.7
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 2.4e-175 619.4 489 63.2
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 1.7e-173 613.2 499 58.9
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 4.3e-172 608.6 457 67.4
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 2.8e-171 605.9 492 59.8
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.8e-170 603.2 493 60.4
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 3.1e-170 602.4 489 62.4
FAN05G2713 Fragaria x ananassa HOM05D007272 ORTHO05D009305 4.4e-169 598.6 493 61.3
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.4e-169 598.6 557 55.7
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 4.4e-169 598.6 468 61.5
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 7.6e-169 597.8 523 59.3
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 3.7e-168 595.5 493 60.6
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 4.9e-168 595.1 480 59.6
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 4.9e-168 595.1 506 60.7
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 1.1e-167 594.0 491 60.1
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 2.4e-167 592.8 493 61.1
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 1.2e-166 590.5 492 60.6
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.2e-166 590.5 582 54.1
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 1.0e-165 587.4 507 59.4
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 6.6e-165 584.7 480 60.6
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 8.6e-165 584.3 475 61.3
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 1.9e-164 583.2 489 59.9
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 4.9e-160 568.5 504 58.5
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 1.4e-159 567.0 492 58.9
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 2.7e-158 562.8 494 58.7
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 1.0e-157 560.8 498 57.4
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 4.8e-155 552.0 476 58.6
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 6.9e-154 548.1 485 57.5
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 9.9e-153 544.3 492 56.1
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 2.2e-152 543.1 477 57.7
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 1.4e-151 540.4 501 55.9
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 3.2e-151 539.3 485 57.7
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 9.3e-151 537.7 579 50.3
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 3.0e-149 532.7 465 55.7
Dinv33728 Davidia involucrata HOM05D007272 ORTHO05D009305 4.3e-148 528.9 362 72.1
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 1.3e-147 527.3 490 56.5
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 3.6e-147 525.8 504 55.6
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 2.4e-146 523.1 503 55.7
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 2.0e-145 520.0 470 54.5
FAN09G2990 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.4e-145 519.2 397 64.7
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 9.9e-145 517.7 370 70.3
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 5.5e-143 511.9 493 55.0
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 1.2e-142 510.8 496 56.0
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 1.1e-140 504.2 494 52.2
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 2.5e-140 503.1 487 55.4
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 3.3e-140 502.7 493 52.3
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 1.3e-136 490.7 503 52.3
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.7e-136 490.3 458 56.8
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 4.9e-136 488.8 458 56.6
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.8e-131 473.0 460 55.2
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.2e-129 467.6 424 54.5
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 2.6e-129 466.5 335 69.0
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 5.9e-129 465.3 493 49.5
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.1e-127 461.1 487 49.5
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 3.2e-127 459.5 399 61.2
Aqoxy3G03290 Aquilegia oxysepala HOM05D007272 ORTHO05D009305 5.7e-124 448.7 396 56.3
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 2.9e-120 436.4 489 47.2
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 4.6e-118 429.1 493 45.8
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 1.8e-114 417.2 520 46.3
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 3.5e-105 386.3 555 41.6
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 7.7e-105 385.2 374 56.1
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 3.8e-104 382.9 315 60.0
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 8.8e-101 371.7 504 44.0
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 2.7e-86 323.6 286 56.6
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 3.7e-83 313.2 485 39.2
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 5.4e-74 282.7 216 63.9
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 5.4e-74 282.7 417 39.1
CSS0034889 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 7.3e-63 245.7 241 56.0
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 5.1e-48 196.4 201 48.8
Duzib147G0842 Durio zibethinus HOM05D007272 ORTHO05D009305 8.4e-43 179.1 168 57.7
AagrBONN_evm.TU.Sc2ySwM_344.2727 Anthoceros agrestis HOM05D007272 ORTHO05D009305 2.3e-32 144.4 188 37.2
Zm00001eb204740 Zea mays HOM05D007272 ORTHO05D009305 3.5e-25 120.6 137 48.2
VMungo0464G0246 Vigna mungo HOM05D007272 ORTHO05D009305 6.0e-25 119.8 130 44.6
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.3e-23 114.0 168 39.3
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.3e-23 114.0 168 39.3
Hma1.2p1_2982F.1_g331250 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.6e-23 113.2 72 76.4
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 5.3e-21 106.7 138 44.9
Medtr6g011510 Medicago truncatula HOM05D007272 ORTHO05D009305 2.0e-20 104.8 128 41.4
CDE04G1434 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 2.2e-19 101.3 122 45.9
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 2.5e-18 97.8 125 44.8
HanXRQChr07g0191831 Helianthus annuus HOM05D007272 ORTHO05D009305 1.2e-17 95.5 72 63.9
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 7.9e-17 92.8 145 37.2
Medtr8g044020 Medicago truncatula HOM05D007272 ORTHO05D009305 1.1e-15 89.0 63 69.8
MELO3C030970.2 Cucumis melo HOM05D007272 ORTHO05D009305 2.5e-15 87.8 77 59.7
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 4.1e-13 80.5 51 66.7
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 4.5e-12 77.0 74 48.6
FAN19G2836 Fragaria x ananassa HOM05D007272 ORTHO05D045475 1.6e-09 68.6 39 79.5
Zm00001eb326820 Zea mays HOM05D005508 ORTHO05D006882 3.7e-06 57.4 274 25.9
EL10Ac5g10958 Beta vulgaris HOM05D003913 ORTHO05D004803 4.8e-06 57.0 204 25.0


User provided reference genes

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