Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 5.0e-243 844.0 412 100.0
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 2.8e-161 572.4 446 65.0
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.2e-157 558.5 445 64.5
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 2.3e-155 552.7 438 64.6
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 8.8e-155 550.8 440 63.6
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 4.8e-153 545.0 448 63.8
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 1.1e-152 543.9 441 63.3
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.3e-152 541.6 442 63.3
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 5.3e-152 541.6 442 63.3
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 9.1e-152 540.8 446 63.5
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 2.0e-151 539.7 444 63.5
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 4.5e-151 538.5 442 63.6
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 2.2e-150 536.2 441 62.4
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 4.2e-149 531.9 436 62.6
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 6.1e-148 528.1 441 61.7
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 7.9e-148 527.7 442 61.8
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 2.0e-146 523.1 442 60.9
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 2.6e-146 522.7 454 59.0
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.8e-145 518.5 445 60.9
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 8.2e-145 517.7 436 60.1
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.1e-144 517.3 445 59.8
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.1e-144 517.3 439 59.7
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 1.1e-144 517.3 439 63.8
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 7.0e-144 514.6 446 60.8
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 1.7e-142 510.0 436 59.2
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 1.1e-141 507.3 436 58.7
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 1.5e-141 506.9 444 59.0
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 7.2e-141 504.6 436 58.5
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.6e-140 503.4 443 59.8
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.6e-140 503.4 438 60.5
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 2.1e-140 503.1 438 61.0
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.7e-140 502.7 442 60.2
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.4e-139 500.4 434 60.1
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 5.2e-139 498.4 446 59.0
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 2.0e-138 496.5 463 57.2
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 2.6e-138 496.1 438 59.1
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 4.8e-137 491.9 436 58.9
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 4.8e-137 491.9 459 58.2
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 2.4e-136 489.6 444 59.2
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 7.0e-136 488.0 435 59.8
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 2.0e-135 486.5 445 57.8
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 3.5e-135 485.7 450 56.4
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 3.5e-135 485.7 434 57.6
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 3.5e-135 485.7 437 57.2
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 1.1e-133 480.7 442 59.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.5e-133 479.6 452 57.5
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 3.2e-133 479.2 434 58.3
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 5.5e-133 478.4 416 60.8
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 1.2e-132 477.2 456 56.1
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 1.6e-132 476.9 442 58.6
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.1e-132 476.5 444 55.9
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 3.6e-132 475.7 441 58.0
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.4e-131 473.8 303 74.9
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.8e-131 473.4 443 56.0
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 4.0e-131 472.2 438 58.0
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 4.0e-131 472.2 447 55.5
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 4.4e-130 468.8 449 54.8
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 5.7e-130 468.4 452 55.1
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 1.8e-128 463.4 399 59.6
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 4.1e-128 462.2 441 55.6
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 1.6e-127 460.3 440 56.6
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 1.6e-127 460.3 463 53.8
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 4.5e-127 458.8 451 54.5
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 2.5e-125 453.0 305 68.9
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 4.2e-125 452.2 448 53.3
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 7.2e-125 451.4 449 53.7
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.3e-123 446.4 438 54.6
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 6.8e-123 444.9 323 65.0
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 8.8e-123 444.5 443 53.7
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 1.2e-122 444.1 444 55.4
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 2.0e-122 443.4 442 55.4
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.6e-122 443.0 452 52.4
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 5.7e-122 441.8 441 55.3
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 1.3e-121 440.7 441 55.1
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.7e-121 440.3 322 66.1
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 2.8e-121 439.5 408 53.7
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 4.9e-121 438.7 438 55.0
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.4e-120 437.2 434 55.1
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 2.4e-120 436.4 435 54.3
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 3.1e-120 436.0 482 50.4
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 4.1e-120 435.6 513 47.6
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.1e-117 427.6 413 53.3
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 5.6e-117 425.2 438 53.9
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 6.8e-115 418.3 437 52.2
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.2e-114 417.5 302 63.9
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.6e-114 416.4 450 51.8
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 2.9e-113 412.9 460 51.3
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.8e-108 396.4 342 61.7
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 2.6e-106 389.8 387 55.8
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.1e-101 374.4 344 58.7
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 1.5e-101 374.0 272 64.3
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 5.6e-101 372.1 293 62.5
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 8.9e-99 364.8 283 60.4
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 2.9e-97 359.8 344 56.7
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.0e-94 351.3 232 71.6
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-94 350.9 331 53.5
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.3e-94 350.9 331 53.5
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 4.0e-91 339.3 337 55.2
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 2.6e-90 336.7 440 43.6
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 3.2e-88 329.7 321 54.2
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 4.1e-88 329.3 306 54.2
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 6.0e-87 325.5 218 70.2
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 5.1e-86 322.4 334 53.3
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 5.6e-85 318.9 268 58.2
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 1.6e-84 317.4 382 47.4
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 7.9e-71 271.9 211 60.2
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 7.9e-71 271.9 211 60.2
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 5.1e-70 269.2 202 65.3
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 1.3e-68 264.6 201 63.7
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 1.9e-56 224.2 268 42.2
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 6.3e-52 209.1 276 39.5
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 8.5e-49 198.7 252 46.8
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 2.1e-47 194.1 214 48.1
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 4.2e-40 169.9 118 67.8
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 2.6e-37 160.6 134 56.0
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 5.0e-33 146.4 127 55.1
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 5.2e-30 136.3 79 73.4
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 8.8e-30 135.6 158 45.6
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 4.0e-22 110.2 70 68.6
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 2.0e-21 107.8 76 63.2
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 7.2e-16 89.4 46 84.8
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.0e-14 85.5 46 80.4
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 5.7e-13 79.7 62 56.5
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.2e-07 62.0 59 44.1
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 1.4e-06 58.5 39 64.1
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.3e-06 57.8 117 26.5


User provided reference genes

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