Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 1.6e-222 775.8 390 100.0
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 2.8e-142 509.2 384 66.4
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 3.6e-142 508.8 384 66.7
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 7.1e-138 494.6 395 64.1
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 1.4e-130 470.3 376 60.6
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 5.4e-130 468.4 362 63.3
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 4.6e-129 465.3 387 60.7
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 3.3e-127 459.1 384 61.5
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 8.9e-125 451.1 389 58.9
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 3.8e-123 445.7 388 59.0
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 5.4e-122 441.8 383 59.5
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 2.1e-121 439.9 390 58.2
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 6.0e-121 438.3 384 59.1
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.0e-120 437.6 390 57.9
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 2.3e-120 436.4 385 60.0
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 8.7e-120 434.5 393 58.3
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 2.1e-118 429.9 375 60.3
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 8.1e-118 427.9 383 56.7
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.0e-117 425.6 384 55.7
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 9.0e-117 424.5 395 57.5
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 9.0e-117 424.5 361 60.7
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 1.5e-116 423.7 380 58.7
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 5.8e-116 421.8 389 58.1
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 8.4e-115 417.9 396 54.3
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 1.1e-114 417.5 383 56.1
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 3.2e-114 416.0 391 55.8
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 1.6e-113 413.7 391 55.8
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 2.1e-113 413.3 393 55.2
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 6.0e-113 411.8 460 50.0
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 2.6e-108 396.4 377 54.1
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 9.9e-108 394.4 408 51.7
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 1.4e-106 390.6 398 50.5
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 5.5e-106 388.7 390 52.8
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 3.5e-105 386.0 354 55.1
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 4.6e-105 385.6 390 52.6
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 6.0e-105 385.2 360 53.6
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 6.0e-105 385.2 345 55.1
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 7.9e-105 384.8 364 53.0
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 1.8e-104 383.6 393 52.7
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.8e-104 383.6 363 53.7
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 3.0e-104 382.9 397 51.6
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 6.7e-104 381.7 369 52.3
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.5e-103 380.6 338 55.9
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 3.3e-103 379.4 367 52.6
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 4.3e-103 379.0 367 52.3
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 4.3e-103 379.0 367 52.9
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 5.6e-103 378.6 370 51.9
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 7.4e-103 378.3 360 52.5
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 1.6e-102 377.1 363 53.2
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 3.7e-102 375.9 359 52.1
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 6.2e-102 375.2 367 52.9
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 6.2e-102 375.2 381 52.5
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 2.4e-101 373.2 364 54.4
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 3.1e-101 372.9 374 52.1
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 5.3e-101 372.1 367 52.3
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 1.3e-99 367.5 392 49.7
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 2.9e-99 366.3 373 49.9
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 1.4e-98 364.0 376 50.3
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 4.2e-98 362.5 354 52.8
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 3.5e-97 359.4 381 51.4
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 3.5e-97 359.4 390 49.7
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 7.9e-97 358.2 365 52.3
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 7.9e-97 358.2 364 51.1
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 1.8e-96 357.1 390 47.9
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 6.7e-96 355.1 387 48.1
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.1e-95 354.4 309 55.7
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 1.5e-95 354.0 368 49.7
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 1.9e-95 353.6 387 49.9
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.9e-95 353.6 383 47.8
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 4.3e-95 352.4 368 51.1
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 4.3e-95 352.4 387 49.4
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 5.7e-95 352.1 357 51.8
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 1.6e-94 350.5 388 47.4
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 9.0e-93 344.7 425 46.8
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 3.4e-92 342.8 375 50.1
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 5.0e-91 339.0 356 50.8
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 2.5e-90 336.7 384 46.6
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 5.5e-90 335.5 347 50.1
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 6.1e-89 332.0 355 49.3
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 2.3e-88 330.1 392 48.7
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 9.0e-85 318.2 365 47.1
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 7.7e-84 315.1 370 48.4
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 6.5e-83 312.0 320 50.3
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 2.5e-82 310.1 330 50.6
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 4.6e-81 305.8 339 47.5
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 1.4e-80 304.3 382 44.2
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 8.8e-80 301.6 281 53.0
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 1.4e-77 294.3 245 60.4
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 7.2e-74 282.0 483 37.1
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 3.6e-73 279.6 419 42.5
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 9.7e-71 271.6 362 41.2
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.0e-63 247.3 266 48.1
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 9.1e-61 238.4 239 52.3
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.9e-58 230.7 237 49.4
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 2.1e-57 227.3 313 41.2
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 3.6e-57 226.5 280 43.9
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 2.3e-56 223.8 346 37.3
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 1.5e-55 221.1 200 55.5
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 1.4e-53 214.5 360 35.8
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 2.7e-52 210.3 185 55.7
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.7e-52 210.3 302 41.7
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 4.2e-50 203.0 183 53.6
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 7.5e-47 192.2 330 37.3
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 1.3e-46 191.4 158 60.1
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 3.6e-41 173.3 227 42.7
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 3.9e-35 153.3 188 46.8
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 1.1e-34 151.8 121 55.4
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 6.2e-33 146.0 127 59.1
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 4.4e-31 139.8 248 35.5
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 1.1e-26 125.2 247 31.6
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 2.5e-26 124.0 134 50.7
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 1.2e-25 121.7 208 32.7
Gorai.007G312600 Gossypium raimondii HOM05D000724 ORTHO05D011687 2.0e-23 114.4 291 30.6
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.1e-17 94.4 80 48.8
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 4.0e-16 90.1 118 42.4
Gohir.D07G137350 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.9e-13 81.3 90 52.2
Gohir.D08G202425 Gossypium hirsutum HOM05D006624 ORTHO05D008209 2.4e-13 80.9 90 52.2
Gohir.D11G288766 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.2e-13 80.5 90 52.2
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 4.1e-13 80.1 105 37.1
Gohir.D07G075451 Gossypium hirsutum HOM05D006624 ORTHO05D008209 7.1e-13 79.3 90 51.1
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.0e-11 75.5 76 44.7
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.9e-11 73.6 65 46.2
arahy.Tifrunner.gnm1.ann1.HID3FF Arachis hypogaea HOM05D006624 ORTHO05D008209 2.8e-09 67.4 116 38.8
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 2.9e-06 57.4 58 51.7


User provided reference genes

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