Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 4.5e-189 664.5 339 100.0
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 3.4e-72 276.2 352 48.9
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 2.5e-62 243.4 340 45.3
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 6.1e-61 238.8 345 43.8
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 6.7e-60 235.3 334 43.1
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 2.0e-59 233.8 347 41.5
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 3.3e-59 233.0 350 43.7
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 6.3e-58 228.8 343 42.3
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 4.1e-57 226.1 350 42.6
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 9.1e-57 224.9 364 41.5
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 2.6e-56 223.4 344 42.7
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.8e-55 219.5 344 42.4
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 2.5e-54 216.9 349 43.3
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.8e-52 210.7 348 42.0
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.1e-51 208.0 349 41.3
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.7e-50 204.1 349 40.7
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 4.8e-50 202.6 350 40.0
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 6.3e-50 202.2 313 42.8
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 8.2e-50 201.8 252 47.6
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 4.1e-49 199.5 350 39.1
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 2.0e-48 197.2 343 41.1
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 7.7e-48 195.3 344 39.0
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 1.3e-47 194.5 354 39.8
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 6.5e-47 192.2 354 39.5
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 8.5e-47 191.8 349 38.1
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 5.5e-46 189.1 344 37.8
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 7.2e-46 188.7 352 38.1
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 6.1e-45 185.7 340 39.7
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 1.5e-43 181.0 339 39.5
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.4e-43 179.5 340 38.8
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.8e-41 174.1 338 36.1
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 1.8e-41 174.1 349 37.5
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 5.3e-41 172.6 284 39.8
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 9.1e-41 171.8 301 40.5
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 1.6e-40 171.0 348 35.6
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.3e-39 167.9 350 37.4
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 1.7e-39 167.5 333 37.2
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 2.9e-39 166.8 338 37.3
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 6.5e-39 165.6 343 34.7
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 3.2e-38 163.3 348 35.3
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 9.4e-38 161.8 334 35.6
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.2e-37 161.4 350 37.7
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 1.2e-37 161.4 342 36.5
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 1.6e-37 161.0 334 35.3
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 2.7e-37 160.2 343 35.9
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 2.3e-36 157.1 326 35.3
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 2.3e-36 157.1 278 41.4
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 2.6e-35 153.7 347 35.7
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 2.2e-34 150.6 337 35.9
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 2.2e-34 150.6 348 33.9
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 2.8e-34 150.2 342 34.5
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 1.1e-33 148.3 340 37.4
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.8e-33 147.5 339 35.7
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 4.5e-32 142.9 376 32.4
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 5.9e-32 142.5 350 33.1
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 1.5e-30 137.9 336 33.3
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 1.9e-30 137.5 324 35.2
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 3.2e-30 136.7 335 34.9
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 5.5e-30 136.0 331 32.0
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 2.1e-29 134.0 303 33.7
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 2.7e-29 133.7 361 32.7
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 2.7e-29 133.7 361 32.7
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 4.7e-29 132.9 339 32.7
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.0e-28 131.7 341 33.1
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 2.3e-28 130.6 370 31.4
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 3.0e-28 130.2 327 32.1
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 1.2e-27 128.3 331 32.6
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.2e-27 128.3 333 32.7
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 3.4e-27 126.7 351 31.6
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 2.2e-26 124.0 368 31.8
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 3.7e-26 123.2 354 32.2
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.1e-25 121.7 350 32.3
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.7e-23 114.4 332 30.7
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 3.8e-23 113.2 384 29.9
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 5.0e-23 112.8 351 31.1
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 6.6e-23 112.5 350 29.4
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 8.6e-23 112.1 350 31.1
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 6.1e-21 105.9 253 33.6
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 1.5e-19 101.3 274 31.4
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 2.2e-18 97.4 350 31.1
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 8.3e-18 95.5 194 36.6
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 1.4e-17 94.7 366 29.2
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 5.9e-16 89.4 365 27.1
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 1.1e-14 85.1 344 26.5
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 2.5e-14 84.0 187 35.8
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 3.3e-14 83.6 360 28.6
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 3.6e-13 80.1 162 37.7
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 4.7e-13 79.7 223 34.1
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 4.4e-11 73.2 324 25.9
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 3.7e-10 70.1 288 27.1
SHI07413 Sapria himalayana HOM05D007538 ORTHO05D009464 1.3e-07 61.6 175 33.1
MBI04_g32200_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 3.9e-07 60.1 57 54.4
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 6.6e-07 59.3 276 30.4
THA.LOC104798612 Tarenaya hassleriana HOM05D007538 ORTHO05D009464 1.1e-06 58.5 82 41.5
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 1.1e-06 58.5 348 23.9
ATR0829G194 Amborella trichopoda HOM05D007538 ORTHO05D009464 3.3e-06 57.0 40 57.5


User provided reference genes

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