Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 5.2e-232 807.4 414 100.0
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 7.4e-170 600.9 381 84.5
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.6e-140 503.4 382 72.0
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 4.4e-138 495.4 375 71.7
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 1.6e-135 486.9 354 72.0
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.1e-132 476.5 386 67.9
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 3.6e-132 475.7 390 66.2
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 6.1e-132 474.9 354 72.3
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 2.6e-130 469.5 307 78.8
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 9.8e-130 467.6 319 77.4
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 1.7e-129 466.8 367 68.7
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 2.9e-129 466.1 312 77.9
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 3.7e-129 465.7 290 80.7
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.1e-128 464.2 379 67.3
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 5.9e-127 458.4 369 67.8
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.0e-123 447.6 325 72.0
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 3.1e-123 446.0 375 64.0
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 3.1e-123 446.0 366 66.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 3.1e-123 446.0 375 63.7
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 3.1e-123 446.0 314 73.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 8.9e-123 444.5 392 62.8
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.5e-122 443.7 350 67.4
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 7.5e-122 441.4 342 68.7
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 4.9e-121 438.7 374 66.0
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 6.4e-121 438.3 364 65.7
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 6.4e-121 438.3 364 65.7
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 8.3e-121 438.0 323 71.2
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 8.3e-121 438.0 322 69.3
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 3.2e-120 436.0 330 68.2
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.1e-120 435.6 377 62.6
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 7.0e-120 434.9 330 68.2
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-119 433.7 337 68.0
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 2.0e-119 433.3 322 70.5
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.7e-119 433.0 368 62.0
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 3.5e-119 432.6 337 67.7
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 7.8e-119 431.4 328 69.2
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 7.8e-119 431.4 314 72.0
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.0e-118 431.0 313 71.6
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.3e-118 430.6 369 64.2
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.3e-118 430.6 329 68.7
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 6.6e-118 428.3 290 75.2
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 8.6e-118 427.9 368 63.0
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.1e-117 427.6 314 71.3
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.9e-117 426.8 312 68.6
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.9e-117 426.8 335 67.2
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.5e-117 426.4 323 68.7
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 5.6e-117 425.2 402 60.4
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 5.6e-117 425.2 314 69.7
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.6e-117 425.2 309 71.5
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.6e-117 425.2 314 71.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 7.3e-117 424.9 314 70.7
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 1.2e-116 424.1 369 63.7
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 3.6e-116 422.5 296 73.0
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.6e-116 422.5 369 62.6
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 3.6e-116 422.5 351 66.1
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.2e-116 421.8 312 70.5
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 1.1e-115 421.0 319 69.3
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.0e-115 419.1 288 74.7
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 4.0e-115 419.1 321 68.5
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 5.2e-115 418.7 355 64.2
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.2e-114 417.5 288 74.0
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.5e-114 417.2 369 62.6
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 7.5e-114 414.8 312 67.9
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 2.2e-113 413.3 322 66.5
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 3.7e-113 412.5 337 64.1
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.1e-111 406.8 324 66.4
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 4.6e-111 405.6 314 66.9
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 6.0e-111 405.2 387 58.7
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.0e-110 404.4 340 65.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.5e-109 400.6 370 60.0
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 3.6e-108 396.0 303 68.3
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.2e-106 391.0 303 68.6
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.6e-106 389.8 249 78.7
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.3e-105 387.5 272 72.8
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 2.2e-105 386.7 310 65.5
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.4e-104 384.0 312 66.7
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.4e-104 384.0 343 59.5
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 2.4e-104 383.3 343 59.5
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 3.2e-104 382.9 325 64.6
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 6.0e-103 378.6 307 68.1
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 6.6e-102 375.2 361 56.5
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 1.2e-100 370.9 360 55.8
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 8.1e-100 368.2 401 52.9
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.8e-99 367.1 397 53.7
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 5.8e-98 362.1 231 78.8
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 9.9e-98 361.3 361 56.2
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.7e-97 360.5 341 57.5
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 1.7e-97 360.5 341 57.5
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.7e-97 360.5 341 57.5
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 6.4e-97 358.6 343 57.7
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 6.4e-97 358.6 417 51.1
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 2.1e-95 353.6 393 52.9
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 3.0e-94 349.7 435 49.4
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 6.6e-94 348.6 317 59.9
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 6.6e-94 348.6 323 57.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 7.3e-93 345.1 345 54.8
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 3.6e-92 342.8 415 50.6
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 6.2e-92 342.0 300 63.7
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.8e-90 335.5 239 73.6
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 4.9e-89 332.4 289 62.3
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 3.0e-86 323.2 329 54.1
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 3.0e-86 323.2 329 54.1
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.1e-85 321.2 336 53.9
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 1.1e-85 321.2 328 52.7
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.9e-85 320.5 330 55.5
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 1.9e-85 320.5 330 55.5
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 6.2e-84 315.5 215 71.6
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 8.1e-84 315.1 331 53.8
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 4.6e-55 219.5 139 80.6
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 3.7e-44 183.3 124 77.4
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 3.5e-42 176.8 315 35.6
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 7.7e-42 175.6 141 63.1
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 3.6e-39 166.8 137 65.7
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.2e-34 151.8 122 60.7
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.7e-34 149.1 179 52.5
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 1.2e-29 135.2 196 42.3
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 7.5e-29 132.5 327 32.7
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 4.8e-28 129.8 380 28.9
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 1.2e-26 125.2 349 29.2
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 2.7e-26 124.0 222 40.1
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 7.7e-26 122.5 130 54.6
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.1e-19 102.1 76 71.1
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 2.5e-16 90.9 76 64.5
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.6e-10 71.6 48 70.8
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.7e-07 60.1 60 53.3
MCO08G142 Micromonas commoda HOM05D020588 ORTHO05D021297 3.1e-06 57.4 106 35.8


User provided reference genes

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