Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G014001 Manihot esculenta HOM05D000003 ORTHO05D000006 1.3e-60 236.1 116 100.0
Manes.06G022000 Manihot esculenta HOM05D000003 ORTHO05D000006 2.2e-23 112.5 104 50.0
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-09 64.3 95 37.9
Hma1.2p1_1077F.1_g254720 Hydrangea macrophylla HOM05D000003 ORTHO05D000006 1.6e-08 63.2 77 36.4
Medtr3g022950 Medicago truncatula HOM05D008558 ORTHO05D011658 3.5e-08 62.0 81 42.0
PSO384G3189 Papaver somniferum HOM05D000003 ORTHO05D000006 4.5e-08 61.6 87 37.9
PGR119G1959 Punica granatum HOM05D000003 ORTHO05D000006 4.5e-08 61.6 92 33.7
Medtr1g018785 Medicago truncatula HOM05D000003 ORTHO05D000006 5.9e-08 61.2 80 43.8
arahy.Tifrunner.gnm1.ann1.A5SCG1 Arachis hypogaea HOM05D000003 ORTHO05D000006 7.7e-08 60.8 84 32.1
MBI11_g04612_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000006 7.7e-08 60.8 84 34.5
Medtr2g105880 Medicago truncatula HOM05D000003 ORTHO05D000006 7.7e-08 60.8 85 36.5
Medtr6g048840 Medicago truncatula HOM05D000003 ORTHO05D000006 7.7e-08 60.8 99 38.4
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.3e-07 60.1 79 38.0
Atru.chr10.1002 Acer truncatum HOM05D000003 ORTHO05D000006 1.7e-07 59.7 77 37.7
Cpa.g.sc70.27 Carica papaya HOM05D000003 ORTHO05D000006 1.7e-07 59.7 77 37.7
TAR308G0004 Trochodendron aralioides HOM05D000003 ORTHO05D000006 1.7e-07 59.7 80 35.0
Atru.chr5.2394 Acer truncatum HOM05D000024 ORTHO05D000006 2.3e-07 59.3 77 37.7
TAR252G0002 Trochodendron aralioides HOM05D000024 ORTHO05D000006 2.9e-07 58.9 78 35.9
PSO541G0911 Papaver somniferum HOM05D000003 ORTHO05D000006 3.8e-07 58.5 84 34.5
TAR710G0001 Trochodendron aralioides HOM05D000024 ORTHO05D000006 5.0e-07 58.2 79 32.9
Medtr7g083690 Medicago truncatula HOM05D000003 ORTHO05D000004 6.6e-07 57.8 99 34.3
Hund19901 Selenicereus undatus HOM05D000003 ORTHO05D000006 6.6e-07 57.8 77 36.4
Aqoxy7G02980 Aquilegia oxysepala HOM05D000024 ORTHO05D000006 8.6e-07 57.4 82 39.0
Atru.chr3.2964 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-06 57.0 77 33.8
Atru.chr4.2769 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 84 32.1
PSO541G1936 Papaver somniferum HOM05D000003 ORTHO05D000006 1.5e-06 56.6 84 32.1
PSO782G0247 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 56.6 95 32.6
Rhsim03G0095700 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-06 56.6 72 40.3
Thecc.09G223500 Theobroma cacao HOM05D009258 ORTHO05D000006 1.5e-06 56.6 77 35.1
Gohir.A04G039600 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.9e-06 56.2 80 38.8
Gohir.A10G154650 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.9e-06 56.2 79 35.4
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 2.5e-06 55.8 77 39.0
Cpa.g.sc170.62 Carica papaya HOM05D000003 ORTHO05D000006 2.5e-06 55.8 94 35.1
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 2.5e-06 55.8 87 34.5
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.5e-06 55.8 82 32.9
ECA234G1757 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.3e-06 55.5 77 31.2
Lsat_1_v5_gn_8_153880 Lactuca sativa HOM05D000003 ORTHO05D000006 3.3e-06 55.5 81 33.3
Peaxi162Scf00118g00214 Petunia axillaris HOM05D000003 ORTHO05D000006 3.3e-06 55.5 80 32.5
Medtr6g016175 Medicago truncatula HOM05D000003 ORTHO05D000006 4.2e-06 55.1 99 33.3
PSO561G0004 Papaver somniferum HOM05D000003 ORTHO05D000004 4.2e-06 55.1 82 32.9
SHI26093 Sapria himalayana HOM05D000003 ORTHO05D000004 4.2e-06 55.1 80 38.8
SHI34096 Sapria himalayana HOM05D000003 ORTHO05D000004 4.2e-06 55.1 80 38.8
SEGI_34117 Sequoiadendron giganteum HOM05D001915 ORTHO05D000006 4.2e-06 55.1 86 31.4
TAR641G0001 Trochodendron aralioides HOM05D000024 ORTHO05D000006 4.2e-06 55.1 80 32.5
Aqoxy5G00983 Aquilegia oxysepala HOM05D000003 ORTHO05D008335 5.5e-06 54.7 83 33.7
Aqoxy7G02921 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.5e-06 54.7 83 33.7
BcaC04g18821 Brassica carinata HOM05D000003 ORTHO05D000006 5.5e-06 54.7 81 37.0
CANSAT80G2906 Cannabis sativa HOM05D000003 ORTHO05D000006 5.5e-06 54.7 84 34.5
PSO063G2825 Papaver somniferum HOM05D000003 ORTHO05D000006 5.5e-06 54.7 82 34.1
SHI09511 Sapria himalayana HOM05D000003 ORTHO05D000004 5.5e-06 54.7 80 38.8
SHI23487 Sapria himalayana HOM05D000003 ORTHO05D000004 5.5e-06 54.7 80 37.5
Atru.chr2.3028 Acer truncatum HOM05D000003 ORTHO05D000004 7.2e-06 54.3 71 40.8
Atru.chr6.308 Acer truncatum HOM05D000003 ORTHO05D000006 7.2e-06 54.3 77 36.4
Aqoxy3G02165 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.2e-06 54.3 81 28.4
Aqoxy5G02484 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 7.2e-06 54.3 81 30.9
MBI17_g22831_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 7.2e-06 54.3 88 31.8
Medtr7g108760 Medicago truncatula HOM05D008558 ORTHO05D000006 7.2e-06 54.3 85 31.8
Medtr8g058470 Medicago truncatula HOM05D008558 ORTHO05D000006 7.2e-06 54.3 85 31.8
PSO210G3912 Papaver somniferum HOM05D000003 ORTHO05D000006 7.2e-06 54.3 96 29.2
PSO384G2183 Papaver somniferum HOM05D000003 ORTHO05D000006 7.2e-06 54.3 95 29.5
Potri.003G024501 Populus trichocarpa HOM05D000003 ORTHO05D000006 7.2e-06 54.3 89 29.2
SEGI_10911 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 7.2e-06 54.3 80 36.2
Atru.chr11.644 Acer truncatum HOM05D000003 ORTHO05D000004 9.5e-06 53.9 77 39.0
Cpa.g.sc168.15 Carica papaya HOM05D000003 ORTHO05D000004 9.5e-06 53.9 81 38.3
AUR62037932 Chenopodium quinoa HOM05D000003 ORTHO05D000006 9.5e-06 53.9 83 33.7
ECA234G2109 Erigeron canadensis HOM05D000003 ORTHO05D000006 9.5e-06 53.9 88 31.8
MBI18_g38717_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 9.5e-06 53.9 89 30.3
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 9.5e-06 53.9 84 31.0
SHI09342 Sapria himalayana HOM05D000003 ORTHO05D000004 9.5e-06 53.9 80 38.8
SHI45326 Sapria himalayana HOM05D000003 ORTHO05D000004 9.5e-06 53.9 80 38.8
SHI47243 Sapria himalayana HOM05D000003 ORTHO05D000004 9.5e-06 53.9 80 38.8


User provided reference genes

Program Settings