Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 7.0e-136 487.3 241 100.0
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 5.0e-102 374.8 235 79.6
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 8.9e-99 364.0 241 76.3
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 1.2e-92 343.6 261 69.0
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 2.1e-92 342.8 213 78.4
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 9.8e-90 334.0 222 75.2
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.7e-89 333.2 243 68.7
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 6.4e-89 331.3 222 74.3
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.4e-88 330.1 227 72.2
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 6.0e-87 324.7 244 69.3
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 7.8e-87 324.3 236 72.5
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 7.8e-87 324.3 310 58.4
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.9e-86 322.0 241 69.3
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 3.9e-86 322.0 225 68.0
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 8.6e-86 320.9 242 69.0
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 1.1e-85 320.5 228 70.6
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.5e-85 320.1 217 72.4
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.5e-85 320.1 219 73.1
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.9e-85 319.7 217 73.3
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 2.5e-85 319.3 211 70.1
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 4.3e-85 318.5 215 73.5
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 5.6e-85 318.2 212 75.0
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 7.3e-85 317.8 219 70.8
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.2e-84 317.0 225 72.0
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 1.2e-84 317.0 211 73.5
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.8e-84 315.8 244 68.4
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 3.6e-84 315.5 228 69.3
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 3.6e-84 315.5 239 67.8
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 4.7e-84 315.1 233 69.5
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 1.1e-83 313.9 245 64.9
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.1e-83 313.9 212 72.2
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 1.1e-83 313.9 216 71.8
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.8e-83 313.2 216 71.3
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.8e-83 313.2 220 71.8
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 4.0e-83 312.0 215 71.2
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 5.2e-83 311.6 209 72.7
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 6.8e-83 311.2 221 70.1
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.2e-82 310.5 241 62.7
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 1.5e-82 310.1 221 69.7
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 2.6e-82 309.3 211 72.5
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.6e-82 309.3 221 71.0
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.6e-82 309.3 221 69.7
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 3.4e-82 308.9 227 68.7
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 5.8e-82 308.1 221 70.6
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 7.6e-82 307.8 218 67.0
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 7.6e-82 307.8 219 69.4
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 9.9e-82 307.4 215 71.2
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 9.9e-82 307.4 241 62.2
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 9.9e-82 307.4 219 66.7
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 9.9e-82 307.4 221 71.0
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.7e-81 306.6 241 62.7
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 2.2e-81 306.2 241 66.8
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 2.9e-81 305.8 221 71.0
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.9e-81 305.8 219 69.9
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 3.7e-81 305.4 226 66.4
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 3.7e-81 305.4 217 71.9
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 4.9e-81 305.1 212 69.8
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 4.9e-81 305.1 218 67.0
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 8.4e-81 304.3 212 71.2
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 1.1e-80 303.9 217 66.8
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 2.4e-80 302.8 219 70.3
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.1e-80 302.0 221 68.8
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 4.1e-80 302.0 219 66.2
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 4.1e-80 302.0 220 68.2
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 5.4e-80 301.6 220 67.7
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.2e-79 300.4 220 65.5
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 2.1e-79 299.7 224 69.6
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 2.7e-79 299.3 217 65.4
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.0e-78 297.4 241 64.3
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 1.7e-78 296.6 221 66.5
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 1.7e-78 296.6 216 65.3
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 3.0e-78 295.8 233 63.1
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 3.0e-78 295.8 241 59.8
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 3.9e-78 295.4 232 66.8
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 1.6e-76 290.0 217 64.1
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 1.6e-76 290.0 224 66.1
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 6.2e-76 288.1 216 63.4
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 5.2e-75 285.0 216 62.5
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 3.4e-74 282.3 212 63.7
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 5.8e-74 281.6 210 68.1
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 5.8e-74 281.6 212 63.7
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.3e-73 280.4 207 67.6
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 1.1e-72 277.3 210 65.7
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 3.2e-72 275.8 210 66.2
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 6.0e-71 271.6 210 64.3
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 6.0e-71 271.6 225 62.2
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.0e-70 270.8 217 64.5
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 3.0e-70 269.2 215 64.7
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 8.7e-70 267.7 210 63.3
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 1.1e-69 267.3 213 63.8
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 7.3e-69 264.6 215 62.8
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 9.6e-69 264.2 215 62.8
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 9.6e-69 264.2 215 62.8
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 9.6e-69 264.2 215 62.8
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 9.6e-69 264.2 189 65.1
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 1.3e-68 263.8 215 62.8
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 1.6e-68 263.5 283 52.3
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 1.6e-68 263.5 221 60.2
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 9.0e-67 257.7 222 57.7
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 3.2e-64 249.2 208 56.7
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 4.2e-64 248.8 143 79.7
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 1.2e-63 247.3 211 61.6
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 3.3e-61 239.2 156 74.4
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 6.9e-59 231.5 143 77.6
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.1e-56 224.2 145 73.1
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 7.1e-56 221.5 139 73.4
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.6e-55 220.3 151 73.5
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.8e-51 206.8 214 49.5
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 7.6e-50 201.4 213 50.7
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 9.0e-43 177.9 115 72.2
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 1.5e-42 177.2 123 66.7
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 1.9e-32 143.7 192 43.2
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 1.5e-13 80.9 136 37.5
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 3.3e-13 79.7 160 31.9
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.5e-10 69.3 62 61.3
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 3.0e-06 56.6 209 28.2


User provided reference genes

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